| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G337229 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 127659 | 117351 | 146796 | 126148 | 52.10% | 46.22% | 245010 | 272944 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
||||
| GRMZM2G337229 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.78085 x 10-2 | 2196 | 970 | 663 | 1192 | 69.36% | 64.26% | 3166 | 1855 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0012959' χ2 p-value for Mo17 x B73: '.0278085' Biased in favor of strain: '' |
||||
| GRMZM2G337191 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.096 x 10-3 | 302 | 172 | 315 | 245 | 63.71% | 43.75% | 474 | 560 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.36e-09' χ2 p-value for Mo17 x B73: '.003096' Biased in favor of strain: 'B73' |
||||
| GRMZM2G337191 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.771933 x 10-1 | 1264 | 674 | 758 | 1191 | 65.22% | 61.11% | 1938 | 1949 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1771933' χ2 p-value for Mo17 x B73: '1.93e-07' Biased in favor of strain: '' |
||||
| GRMZM2G337190 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.920615 x 10-1 | 55 | 32 | 53 | 49 | 63.22% | 48.04% | 87 | 102 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0136685' χ2 p-value for Mo17 x B73: '.6920615' Biased in favor of strain: '' |
||||
| GRMZM2G337190 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.390335 x 10-1 | 363 | 229 | 293 | 538 | 61.32% | 64.74% | 592 | 831 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0057624' χ2 p-value for Mo17 x B73: '.2390335' Biased in favor of strain: '' |
||||
| GRMZM2G337143 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.06938 x 10-2 | 481 | 383 | 557 | 475 | 55.67% | 46.03% | 864 | 1032 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000856' χ2 p-value for Mo17 x B73: '.0106938' Biased in favor of strain: 'B73' |
||||
| GRMZM2G337143 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.72224 x 10-2 | 469 | 201 | 238 | 397 | 70.00% | 62.52% | 670 | 635 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0672224' χ2 p-value for Mo17 x B73: '.0266371' Biased in favor of strain: '' |
||||
| GRMZM2G337068 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.5 x 10-6 | 103 | 28 | 76 | 29 | 78.63% | 27.62% | 131 | 105 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.65e-11' χ2 p-value for Mo17 x B73: '4.50e-06' Biased in favor of strain: 'B73' |
||||
| GRMZM2G337068 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.420892 x 10-1 | 190 | 127 | 127 | 252 | 59.94% | 66.49% | 317 | 379 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0110265' χ2 p-value for Mo17 x B73: '.9420892' Biased in favor of strain: '' |
||||
| GRMZM2G336908 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.008251 x 10-1 | 5 | 16 | 8 | 14 | 23.81% | 63.64% | 21 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0163773' χ2 p-value for Mo17 x B73: '.2008251' Biased in favor of strain: '' |
||||
| GRMZM2G336908 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.007858 x 10-1 | 64 | 38 | 40 | 59 | 62.75% | 59.60% | 102 | 99 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4007858' χ2 p-value for Mo17 x B73: '.1355929' Biased in favor of strain: '' |
||||
| GRMZM2G336871 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.442167 x 10-1 | 129 | 117 | 127 | 143 | 52.44% | 52.96% | 246 | 270 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4442167' χ2 p-value for Mo17 x B73: '.3301911' Biased in favor of strain: '' |
||||
| GRMZM2G336871 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.66951 x 10-2 | 98 | 71 | 50 | 205 | 57.99% | 80.39% | 169 | 255 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0166951' χ2 p-value for Mo17 x B73: '3.33e-06' Biased in favor of strain: '' |
||||
| GRMZM2G336865 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 1 | 4 | 6 | 80.00% | 60.00% | 5 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.5270892' Biased in favor of strain: '' |
|||||
| GRMZM2G336865 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G336815 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.25 x 10-5 | 345 | 236 | 241 | 158 | 59.38% | 39.60% | 581 | 399 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.12e-06' χ2 p-value for Mo17 x B73: '.0000325' Biased in favor of strain: 'B73' |
||||
| GRMZM2G336815 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.787153 x 10-1 | 1126 | 551 | 630 | 1115 | 67.14% | 63.90% | 1677 | 1745 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6787153' χ2 p-value for Mo17 x B73: '.0141097' Biased in favor of strain: '' |
||||
| GRMZM2G336766 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.327676 x 10-1 | 15 | 7 | 15 | 11 | 68.18% | 42.31% | 22 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0880815' χ2 p-value for Mo17 x B73: '.4327676' Biased in favor of strain: '' |
||||
| GRMZM2G336766 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.44 x 10-5 | 61 | 5 | 43 | 35 | 92.42% | 44.87% | 66 | 78 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.04e-06' χ2 p-value for Mo17 x B73: '.0000444' Biased in favor of strain: 'B73' |
||||
| GRMZM2G336761 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.71 x 10-6 | 218 | 133 | 285 | 178 | 62.11% | 38.44% | 351 | 463 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.71e-06' χ2 p-value for Mo17 x B73: '6.60e-07' Biased in favor of strain: 'B73' |
||||
| GRMZM2G336761 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.513717 x 10-1 | 108 | 44 | 81 | 95 | 71.05% | 53.98% | 152 | 176 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2513717' χ2 p-value for Mo17 x B73: '.0003555' Biased in favor of strain: '' |
||||
| GRMZM2G336583 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.63579 x 10-2 | 560 | 444 | 399 | 334 | 55.78% | 45.57% | 1004 | 733 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002513' χ2 p-value for Mo17 x B73: '.0163579' Biased in favor of strain: 'B73' |
||||
| GRMZM2G336583 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.4032 x 10-3 | 572 | 353 | 241 | 607 | 61.84% | 71.58% | 925 | 848 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0018358' χ2 p-value for Mo17 x B73: '.0024032' Biased in favor of strain: 'Mo17' |
||||
| GRMZM2G336557 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.53 x 10-6 | 9 | 44 | 13 | 82 | 16.98% | 86.32% | 53 | 95 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.53e-06' χ2 p-value for Mo17 x B73: '1.45e-12' Biased in favor of strain: 'Mo17' |
||||
| GRMZM2G336557 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
|||||||
| GRMZM2G336448 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.6998 x 10-3 | 44 | 20 | 36 | 14 | 68.75% | 28.00% | 64 | 50 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026998' χ2 p-value for Mo17 x B73: '.0018628' Biased in favor of strain: 'B73' |
||||
| GRMZM2G336448 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 16 | 1 | 2 | 6 | 94.12% | 75.00% | 17 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0163517' χ2 p-value for Mo17 x B73: '.6170751' Biased in favor of strain: '' |
|||||
| GRMZM2G336337 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 3 | 0 | 100.00% | 0.00% | 2 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
|||||
| GRMZM2G336337 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G336326 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 1 | 6 | 0 | 80.00% | 0.00% | 5 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
|||||
| GRMZM2G336326 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 1 | 100.00% | 50.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: '' |
|||||
| GRMZM2G336134 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.22036 x 10-2 | 10 | 3 | 16 | 2 | 76.92% | 11.11% | 13 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0522036' χ2 p-value for Mo17 x B73: '.0009674' Biased in favor of strain: '' |
||||
| GRMZM2G336134 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.74 x 10-6 | 40 | 0 | 30 | 1 | 100.00% | 3.23% | 40 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.74e-06' χ2 p-value for Mo17 x B73: '6.73e-14' Biased in favor of strain: 'B73' |
||||
| GRMZM2G336017 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.49 x 10-7 | 33 | 2 | 32 | 3 | 94.29% | 8.57% | 35 | 35 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.61e-07' χ2 p-value for Mo17 x B73: '9.49e-07' Biased in favor of strain: 'B73' |
||||
| GRMZM2G336017 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 8 | 5 | 100.00% | 38.46% | 5 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.030984' Biased in favor of strain: '' |
|||||
| GRMZM2G335826 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
|||||||
| GRMZM2G335826 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 0 | 0 | 100.00% | 5 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G335738 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.814492 x 10-1 | 47 | 32 | 33 | 23 | 59.49% | 41.07% | 79 | 56 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0914819' χ2 p-value for Mo17 x B73: '.1814492' Biased in favor of strain: '' |
||||
| GRMZM2G335738 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.936949 x 10-1 | 22 | 8 | 9 | 19 | 73.33% | 67.86% | 30 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4385918' χ2 p-value for Mo17 x B73: '.8936949' Biased in favor of strain: '' |
||||
| GRMZM2G335720 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.407483 x 10-1 | 106 | 93 | 90 | 91 | 53.27% | 50.28% | 199 | 181 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3567657' χ2 p-value for Mo17 x B73: '.9407483' Biased in favor of strain: '' |
||||
| GRMZM2G335720 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.041746 x 10-1 | 111 | 59 | 79 | 125 | 65.29% | 61.27% | 170 | 204 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7041746' χ2 p-value for Mo17 x B73: '.1023126' Biased in favor of strain: '' |
||||
| GRMZM2G335685 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
|||||
| GRMZM2G335685 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 2 | 1 | 100.00% | 33.33% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: '' |
|||||
| GRMZM2G335657 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.962534 x 10-1 | 6 | 10 | 8 | 7 | 37.50% | 46.67% | 16 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.7962534' Biased in favor of strain: '' |
||||
| GRMZM2G335657 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.630069 x 10-1 | 14 | 8 | 6 | 17 | 63.64% | 73.91% | 22 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7630069' χ2 p-value for Mo17 x B73: '.4609949' Biased in favor of strain: '' |
||||
| GRMZM2G335638 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 5 | 5 | 6 | 6 | 50.00% | 50.00% | 10 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
||||
| GRMZM2G335638 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 7 | 5 | 100.00% | 41.67% | 5 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.0661925' Biased in favor of strain: '' |
|||||
| GRMZM2G335618 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.07 x 10-8 | 193 | 101 | 282 | 125 | 65.65% | 30.71% | 294 | 407 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.07e-08' χ2 p-value for Mo17 x B73: '7.13e-15' Biased in favor of strain: 'B73' |
||||
| GRMZM2G335618 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.15594 x 10-2 | 44 | 9 | 0 | 57 | 83.02% | 100.00% | 53 | 57 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0115594' χ2 p-value for Mo17 x B73: '9.37e-08' Biased in favor of strain: '' |
||||
| GRMZM2G335521 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 3 | 1 | 0.00% | 25.00% | 1 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
|||||
| GRMZM2G335521 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G335438 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
|||||||
| GRMZM2G335438 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 6 | 0 | 100.00% | 0.00% | 4 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: '' |
|||||
| GRMZM2G335419 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 4 | 1 | 100.00% | 20.00% | 8 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: '' |
|||||
| GRMZM2G335419 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 1 | 10 | 100.00% | 90.91% | 5 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.0880815' Biased in favor of strain: '' |
|||||
| GRMZM2G335359 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.937686 x 10-1 | 8 | 16 | 13 | 9 | 33.33% | 40.91% | 24 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.3937686' Biased in favor of strain: '' |
||||
| GRMZM2G335359 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.101816 x 10-1 | 34 | 19 | 25 | 53 | 64.15% | 67.95% | 53 | 78 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6976089' χ2 p-value for Mo17 x B73: '.8101816' Biased in favor of strain: '' |
||||
| GRMZM2G335287 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.3 x 10-29 | 571 | 251 | 552 | 189 | 69.46% | 25.51% | 822 | 741 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.31e-29' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
||||
| GRMZM2G335287 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.39 x 10-7 | 563 | 180 | 393 | 346 | 75.77% | 46.82% | 743 | 739 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.39e-07' χ2 p-value for Mo17 x B73: '2.49e-30' Biased in favor of strain: 'B73' |
||||
| GRMZM2G335126 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.52297 x 10-2 | 298 | 253 | 264 | 195 | 54.08% | 42.48% | 551 | 459 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0552297' χ2 p-value for Mo17 x B73: '.001279' Biased in favor of strain: '' |
||||
| GRMZM2G335126 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.935357 x 10-1 | 144 | 65 | 119 | 198 | 68.90% | 62.46% | 209 | 317 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4935357' χ2 p-value for Mo17 x B73: '.1121498' Biased in favor of strain: '' |
||||
| GRMZM2G335111 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.7374 x 10-3 | 115 | 78 | 156 | 84 | 59.59% | 35.00% | 193 | 240 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0077374' χ2 p-value for Mo17 x B73: '3.36e-06' Biased in favor of strain: 'B73' |
||||
| GRMZM2G335111 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 5 | 4 | 7 | 44.44% | 63.64% | 9 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572937' χ2 p-value for Mo17 x B73: '.8311703' Biased in favor of strain: '' |
|||||
| GRMZM2G335052 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 3 | 2 | 0.00% | 40.00% | 2 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: '' |
|||||
| GRMZM2G335052 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
|||||||
| GRMZM2G334917 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 0 | 0 | 100.00% | 8 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G334917 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 39 | 0 | 0 | 0 | 100.00% | 39 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G334899 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.929801 x 10-1 | 6 | 8 | 3 | 7 | 42.86% | 70.00% | 14 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5929801' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: '' |
||||
| GRMZM2G334899 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G334891 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G334891 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 15 | 0 | 0 | 0 | 100.00% | 15 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G334857 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.513491 x 10-1 | 28 | 17 | 12 | 7 | 62.22% | 36.84% | 45 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1010503' χ2 p-value for Mo17 x B73: '.2513491' Biased in favor of strain: '' |
||||
| GRMZM2G334857 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 1 | 2 | 0.00% | 66.67% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
|||||
| GRMZM2G334791 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.22 x 10-6 | 168 | 83 | 147 | 78 | 66.93% | 34.67% | 251 | 225 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.09e-08' χ2 p-value for Mo17 x B73: '4.22e-06' Biased in favor of strain: 'B73' |
||||
| GRMZM2G334791 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.47 x 10-5 | 320 | 100 | 199 | 215 | 76.19% | 51.93% | 420 | 414 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000347' χ2 p-value for Mo17 x B73: '2.02e-10' Biased in favor of strain: 'B73' |
||||
| GRMZM2G334741 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 8 | 1 | 2 | 27.27% | 66.67% | 11 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.131668' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
|||||
| GRMZM2G334741 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 3 | 4 | 0 | 25.00% | 0.00% | 4 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0770973' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
|||||
| GRMZM2G334740 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 41 | 312 | 54 | 288 | 11.61% | 84.21% | 353 | 342 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.07e-36' Biased in favor of strain: 'Mo17' |
||||
| GRMZM2G334740 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.39054 x 10-2 | 3 | 7 | 0 | 30 | 30.00% | 100.00% | 10 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0139054' χ2 p-value for Mo17 x B73: '.0001075' Biased in favor of strain: '' |
||||
| GRMZM2G334722 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 x 10-8 | 668 | 367 | 626 | 439 | 64.54% | 41.22% | 1035 | 1065 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.27e-21' χ2 p-value for Mo17 x B73: '1.00e-08' Biased in favor of strain: 'B73' |
||||
| GRMZM2G334722 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.39 x 10-18 | 420 | 72 | 221 | 141 | 85.37% | 38.95% | 492 | 362 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.39e-18' χ2 p-value for Mo17 x B73: '4.74e-29' Biased in favor of strain: 'B73' |
||||
| GRMZM2G334680 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 0 | 0 | 100.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G334680 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G334639 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.21 x 10-13 | 0 | 55 | 0 | 63 | 0.00% | 100.00% | 55 | 63 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.21e-13' χ2 p-value for Mo17 x B73: '2.07e-15' Biased in favor of strain: 'Mo17' |
||||
| GRMZM2G334639 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.5515 x 10-3 | 0 | 59 | 0 | 17 | 0.00% | 100.00% | 59 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.73e-27' χ2 p-value for Mo17 x B73: '.0035515' Biased in favor of strain: 'Mo17' |
||||
| GRMZM2G334628 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2891 | 1120 | 2585 | 1077 | 72.08% | 29.41% | 4011 | 3662 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
||||
| GRMZM2G334628 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.28 x 10-6 | 1796 | 730 | 1169 | 1418 | 71.10% | 54.81% | 2526 | 2587 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.28e-06' χ2 p-value for Mo17 x B73: '1.86e-37' Biased in favor of strain: 'B73' |
||||
| GRMZM2G334584 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.19 x 10-5 | 67 | 25 | 69 | 7 | 72.83% | 9.21% | 92 | 76 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000119' χ2 p-value for Mo17 x B73: '1.14e-12' Biased in favor of strain: 'B73' |
||||
| GRMZM2G334584 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.985152 x 10-1 | 19 | 11 | 12 | 20 | 63.33% | 62.50% | 30 | 32 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6985152' χ2 p-value for Mo17 x B73: '.6170748' Biased in favor of strain: '' |
||||
| GRMZM2G334574 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.869743 x 10-1 | 100 | 98 | 133 | 138 | 50.51% | 50.92% | 198 | 271 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8869743' χ2 p-value for Mo17 x B73: '.7613348' Biased in favor of strain: '' |
||||
| GRMZM2G334574 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 5 | 5 | 11 | 0.00% | 68.75% | 5 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015653' χ2 p-value for Mo17 x B73: '.8596839' Biased in favor of strain: '' |
|||||
| GRMZM2G334457 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2022 | 1083 | 1665 | 957 | 65.12% | 36.50% | 3105 | 2622 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
||||
| GRMZM2G334457 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.15784 x 10-2 | 1697 | 760 | 1301 | 1716 | 69.07% | 56.88% | 2457 | 3017 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0115784' χ2 p-value for Mo17 x B73: '3.91e-30' Biased in favor of strain: '' |
||||
| GRMZM2G334409 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.635483 x 10-1 | 140 | 128 | 146 | 97 | 52.24% | 39.92% | 268 | 243 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4635483' χ2 p-value for Mo17 x B73: '.0016703' Biased in favor of strain: '' |
||||
| GRMZM2G334409 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.43 x 10-6 | 151 | 32 | 118 | 111 | 82.51% | 48.47% | 183 | 229 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.43e-06' χ2 p-value for Mo17 x B73: '5.19e-09' Biased in favor of strain: 'B73' |
||||
| GRMZM2G334336 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 4 | 1 | 2 | 33.33% | 66.67% | 6 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
|||||
| GRMZM2G334336 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 0 | 4 | 0.00% | 100.00% | 3 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
|||||
| GRMZM2G334165 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.270892 x 10-1 | 13 | 7 | 6 | 4 | 65.00% | 40.00% | 20 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.5270892' Biased in favor of strain: '' |
||||
| GRMZM2G334165 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 2 | 1 | 4 | 33.33% | 80.00% | 3 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206667' χ2 p-value for Mo17 x B73: '.5270893' Biased in favor of strain: '' |