Displaying data sets 82701 - 82800 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G24460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.99553 x 10-1 3 4 9 15 42.86% 62.50% 7 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.406079'
Avg. expression score for this sample: '5.79791'
Avg. expression score in LCM sample: '32.3795'
Tissue used: 'full endosperm'
AT3G24460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.102 x 10-3 59 51 53.64% 110 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 3 2 3 25.00% 60.00% 4 5 TAIR8 Avg. embryo expression (dissected): '4.34882'
Avg. embryo expression (LCM): '1.41912'
AT3G24450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 3 0 2 25.00% 100.00% 4 2 TAIR8 Avg. embryo expression (dissected): '21.4814'
Avg. embryo expression (LCM): '20.0435'
AT3G24450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 3 0.00% 100.00% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.346935'
Avg. expression score for this sample: '3.43696'
Avg. expression score in LCM sample: '1.95482'
Tissue used: 'pure endosperm, no chalazal'
AT3G24450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.4 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.66667 x 10-1 0 2 3 0 0.00% 0.00% 2 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.346935'
Avg. expression score for this sample: '2.4814'
Avg. expression score in LCM sample: '1.95482'
Tissue used: 'full endosperm'
AT3G24440 VRN5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.48473 x 10-1 10 1 8 19 90.91% 70.37% 11 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.868892'
Avg. expression score for this sample: '79.1559'
Avg. expression score in LCM sample: '63.642'
Tissue used: 'full endosperm'
AT3G24440 VRN5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.94011 x 10-1 36 13 73.47% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24440 VRN5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.51111 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24440 VRN5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 14 21 4 9 40.00% 69.23% 35 13 TAIR8 Avg. embryo expression (dissected): '195.031'
Avg. embryo expression (LCM): '123.313'
AT3G24440 VRN5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.9108 x 10-2 30 5 85.71% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24440 VRN5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.26954 x 10-1 12 12 5 17 50.00% 77.27% 24 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.868892'
Avg. expression score for this sample: '97.2656'
Avg. expression score in LCM sample: '63.642'
Tissue used: 'pure endosperm, no chalazal'
AT3G24430 HCF101 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '88.4859'
Avg. expression score in LCM sample: '26.4269'
Tissue used: 'pure endosperm, no chalazal'
AT3G24430 HCF101 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24430 HCF101 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '69.1419'
Avg. expression score in LCM sample: '26.4269'
Tissue used: 'full endosperm'
AT3G24430 HCF101 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '178.285'
Avg. embryo expression (LCM): '117.825'
AT3G24430 HCF101 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24430 HCF101 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.6 x 10-24 515 0 100.00% 515 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.38462 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.4852 x 10-2 20 68 14 23 22.73% 62.16% 88 37 TAIR8 Avg. embryo expression (dissected): '71.7821'
Avg. embryo expression (LCM): '22.3919'
AT3G24420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7 x 10-9 326 27 92.35% 353 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 1 1 0 75.00% 0.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.236285'
Avg. expression score for this sample: '1.83556'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G24420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.11392 x 10-1 5 3 13 11 62.50% 45.83% 8 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.236285'
Avg. expression score for this sample: '8.12835'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G24360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.46023'
Avg. expression score in LCM sample: '4.2477'
Tissue used: 'full endosperm'
AT3G24360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '9.67268'
Avg. embryo expression (LCM): '13.6261'
AT3G24360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.86488'
Avg. expression score in LCM sample: '4.2477'
Tissue used: 'pure endosperm, no chalazal'
AT3G24360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24350 SYP32 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.60293 x 10-1 95 21 81.90% 116 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24350 SYP32 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 12 14 5 26 46.15% 83.87% 26 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.068963'
Avg. expression score for this sample: '71.2164'
Avg. expression score in LCM sample: '24.766'
Tissue used: 'pure endosperm, no chalazal'
AT3G24350 SYP32 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.5214 x 10-2 24 8 7 50 75.00% 87.72% 32 57 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.068963'
Avg. expression score for this sample: '69.6379'
Avg. expression score in LCM sample: '24.766'
Tissue used: 'full endosperm'
AT3G24350 SYP32 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.5649 x 10-1 76 35 68.47% 111 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24350 SYP32 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 13 4 76.47% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24350 SYP32 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.77512 x 10-1 8 11 0 6 42.11% 100.00% 19 6 TAIR8 Avg. embryo expression (dissected): '56.9375'
Avg. embryo expression (LCM): '37.4999'
AT3G24340 CHR40 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.19551 x 10-1 76 63 33 23 54.68% 41.07% 139 56 TAIR8 Avg. embryo expression (dissected): '415.936'
Avg. embryo expression (LCM): '227.8'
AT3G24340 CHR40 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.64698 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24340 CHR40 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.41 x 10-4 32 3 91.43% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24340 CHR40 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.9 x 10-6 76 10 88.37% 86 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24340 CHR40 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.78155 x 10-1 50 23 42 63 68.49% 60.00% 73 105 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.576824'
Avg. expression score for this sample: '225.553'
Avg. expression score in LCM sample: '74.4449'
Tissue used: 'full endosperm'
AT3G24340 CHR40 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 37 14 13 13 72.55% 50.00% 51 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.576824'
Avg. expression score for this sample: '140.414'
Avg. expression score in LCM sample: '74.4449'
Tissue used: 'pure endosperm, no chalazal'
AT3G24332 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 1 5 0.00% 83.33% 1 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.713982'
Avg. expression score for this sample: '6.65195'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G24332 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.40405 x 10-1 3 1 1 7 75.00% 87.50% 4 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.713982'
Avg. expression score for this sample: '8.99931'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G24332 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24332 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24332 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.80172 x 10-1 4 4 0 3 50.00% 100.00% 8 3 TAIR8 Avg. embryo expression (dissected): '11.629'
Avg. embryo expression (LCM): '5.38763'
AT3G24332 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.98498 x 10-1 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 1 2 66.67% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.24605'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G24330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 2 100.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.9673'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G24330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 2 1 2 33.33% 66.67% 3 3 TAIR8 Avg. embryo expression (dissected): '16.2565'
Avg. embryo expression (LCM): '2.51172'
AT3G24330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24320 MSH1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.7532 x 10-2 13 2 86.67% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24320 MSH1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.17729 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24320 MSH1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.64403 x 10-1 16 30 4 2 34.78% 33.33% 46 6 TAIR8 Avg. embryo expression (dissected): '52.2662'
Avg. embryo expression (LCM): '61.9766'
AT3G24320 MSH1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.502 x 10-3 15 1 93.75% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24320 MSH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.0865 x 10-2 9 18 1 3 33.33% 75.00% 27 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.13467'
Avg. expression score for this sample: '16.8616'
Avg. expression score in LCM sample: '9.11271'
Tissue used: 'pure endosperm, no chalazal'
AT3G24320 MSH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 9 3 7 9 75.00% 56.25% 12 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.13467'
Avg. expression score for this sample: '19.2244'
Avg. expression score in LCM sample: '9.11271'
Tissue used: 'full endosperm'
AT3G24315 AtSec20 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '39.5948'
Avg. expression score in LCM sample: '17.4611'
Tissue used: 'full endosperm'
AT3G24315 AtSec20 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '33.3114'
Avg. expression score in LCM sample: '17.4611'
Tissue used: 'pure endosperm, no chalazal'
AT3G24315 AtSec20 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '30.5859'
Avg. embryo expression (LCM): '34.1091'
AT3G24315 AtSec20 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24315 AtSec20 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24315 AtSec20 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24310 MYB305 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24310 MYB305 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G24310 MYB305 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.319252'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G24310 MYB305 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24310 MYB305 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24310 MYB305 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.277289'
Avg. embryo expression (LCM): '0'
AT3G24300 AMT1;3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.165237'
Avg. embryo expression (LCM): '0'
AT3G24300 AMT1;3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24300 AMT1;3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24300 AMT1;3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24300 AMT1;3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G24300 AMT1;3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G24290 AMT1;5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G24290 AMT1;5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.476451'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G24290 AMT1;5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.66667 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24290 AMT1;5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24290 AMT1;5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G24290 AMT1;5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24280 SMAP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 91 70 56.52% 161 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24280 SMAP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.0253'
Avg. expression score in LCM sample: '9.43606'
Tissue used: 'full endosperm'
AT3G24280 SMAP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.97664'
Avg. expression score in LCM sample: '9.43606'
Tissue used: 'pure endosperm, no chalazal'
AT3G24280 SMAP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G24280 SMAP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24280 SMAP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 378 224 62.79% 602 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24270 PUM25 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24270 PUM25 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24270 PUM25 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 2 0 0.00% 0 2 TAIR8 Avg. embryo expression (dissected): '7.22754'
Avg. embryo expression (LCM): '0'
AT3G24270 PUM25 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24270 PUM25 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.632292'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G24270 PUM25 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'