Displaying data sets 82601 - 82700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G24535 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 4.44444 x 10-1 0 0 0 5 100.00% 0 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '9.24849'
Avg. expression score in LCM sample: '2.60153'
Tissue used: 'full endosperm'
AT3G24535 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '.913283'
Avg. expression score in LCM sample: '2.60153'
Tissue used: 'pure endosperm, no chalazal'
AT3G24530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.70797 x 10-1 412 229 221 502 64.27% 69.43% 641 723 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000056'
Avg. expression score for this sample: '210.674'
Avg. expression score in LCM sample: '98.0351'
Tissue used: 'pure endosperm, no chalazal'
AT3G24530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.3 x 10-7 722 374 283 1068 65.88% 79.05% 1096 1351 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000056'
Avg. expression score for this sample: '266.204'
Avg. expression score in LCM sample: '98.0351'
Tissue used: 'full endosperm'
AT3G24530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5 x 10-14 742 150 83.18% 892 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 x 10-30 883 122 87.86% 1005 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.168 x 10-3 192 50 79.34% 242 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.21072 x 10-1 328 322 75 96 50.46% 56.14% 650 171 TAIR8 Avg. embryo expression (dissected): '179.735'
Avg. embryo expression (LCM): '103.52'
AT3G24520 HSFC1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.05249 x 10-1 18 16 15 7 52.94% 31.82% 34 22 TAIR8 Avg. embryo expression (dissected): '46.9789'
Avg. embryo expression (LCM): '6.80675'
AT3G24520 HSFC1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.601 x 10-3 56 65 46.28% 121 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24520 HSFC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.11316 x 10-1 259 88 202 228 74.64% 53.02% 347 430 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.019245'
Avg. expression score for this sample: '241.863'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G24520 HSFC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.7467 x 10-2 118 82 24 32 59.00% 57.14% 200 56 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.019245'
Avg. expression score for this sample: '129.98'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G24520 HSFC1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24520 HSFC1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.9786 x 10-2 9 15 37.50% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24518 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24518 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24518 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 2 2 1 66.67% 33.33% 6 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.688168'
Avg. expression score for this sample: '4.63915'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G24518 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24518 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 0 1 0 100.00% 0.00% 2 1 TAIR8 Avg. embryo expression (dissected): '4.40525'
Avg. embryo expression (LCM): '2.16008'
AT3G24518 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 2 0 0 50.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.688168'
Avg. expression score for this sample: '7.6888'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G24517 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.738483'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G24517 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G24517 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24517 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24517 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G24517 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24516 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24516 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.54426'
Avg. embryo expression (LCM): '0'
AT3G24516 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G24516 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24516 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24516 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G24515 UBC37 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.44576 x 10-1 24 6 15 12 80.00% 44.44% 30 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.372533'
Avg. expression score for this sample: '8.70725'
Avg. expression score in LCM sample: '18.9897'
Tissue used: 'pure endosperm, no chalazal'
AT3G24515 UBC37 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.7 x 10-10 37 79 31.90% 116 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24515 UBC37 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.8 x 10-6 155 11 93.37% 166 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24515 UBC37 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.5877 x 10-2 62 25 16 6 71.26% 27.27% 87 22 TAIR8 Avg. embryo expression (dissected): '30.0068'
Avg. embryo expression (LCM): '36.9599'
AT3G24515 UBC37 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.42 x 10-4 0 6 0.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24515 UBC37 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.3422 x 10-2 20 1 7 22 95.24% 75.86% 21 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.372533'
Avg. expression score for this sample: '5.60702'
Avg. expression score in LCM sample: '18.9897'
Tissue used: 'full endosperm'
AT3G24513 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.4135'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G24513 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.85714 x 10-1 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24513 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.44444 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24513 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.00162'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G24513 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24513 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '4.9104'
AT3G24510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G24510 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.938159'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G24510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 2 0 4 0.00% 100.00% 2 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.79765'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G24510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3807 2016 65.38% 5823 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 9767 5421 64.31% 15188 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24508 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24508 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24508 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G24508 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24508 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G24508 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G24506 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.40952 x 10-1 21 5 10 22 80.77% 68.75% 26 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.259097'
Avg. expression score for this sample: '94.3426'
Avg. expression score in LCM sample: '29.6898'
Tissue used: 'full endosperm'
AT3G24506 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.30428 x 10-1 14 2 6 14 87.50% 70.00% 16 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.259097'
Avg. expression score for this sample: '59.6614'
Avg. expression score in LCM sample: '29.6898'
Tissue used: 'pure endosperm, no chalazal'
AT3G24506 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.67813 x 10-1 7 4 63.64% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24506 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.7605 x 10-2 28 2 93.33% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24506 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 21 23 8 10 47.73% 55.56% 44 18 TAIR8 Avg. embryo expression (dissected): '126.262'
Avg. embryo expression (LCM): '143.168'
AT3G24506 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.4106 x 10-2 3 5 37.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24503 ALDH2C4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.51514 x 10-1 224 35 86.49% 259 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24503 ALDH2C4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.14983 x 10-1 99 92 23 25 51.83% 52.08% 191 48 TAIR8 Avg. embryo expression (dissected): '175.416'
Avg. embryo expression (LCM): '117.297'
AT3G24503 ALDH2C4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 661 138 179 1339 82.73% 88.21% 799 1518 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '409.852'
Avg. expression score in LCM sample: '21.4443'
Tissue used: 'full endosperm'
AT3G24503 ALDH2C4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1918 5 99.74% 1923 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24503 ALDH2C4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 1694 8 99.53% 1702 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24503 ALDH2C4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.5 x 10-5 118 16 29 88 88.06% 75.21% 134 117 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '141.636'
Avg. expression score in LCM sample: '21.4443'
Tissue used: 'pure endosperm, no chalazal'
AT3G24500 MBF1C endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 x 10-5 1033 299 393 782 77.55% 66.55% 1332 1175 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '16803.5'
Avg. expression score in LCM sample: '81.7792'
Tissue used: 'pure endosperm, no chalazal'
AT3G24500 MBF1C endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.83459 x 10-1 216 73 74.74% 289 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24500 MBF1C endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 938 41 95.81% 979 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24500 MBF1C embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.34698 x 10-1 575 530 77 109 52.04% 58.60% 1105 186 TAIR8 Avg. embryo expression (dissected): '12017.7'
Avg. embryo expression (LCM): '135.771'
AT3G24500 MBF1C endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.23336 x 10-1 522 154 77.22% 676 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24500 MBF1C endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 2120 282 618 1516 88.26% 71.04% 2402 2134 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '9297.47'
Avg. expression score in LCM sample: '81.7792'
Tissue used: 'full endosperm'
AT3G24495 MSH7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.06721 x 10-1 9 4 5 19 69.23% 79.17% 13 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.350396'
Avg. expression score for this sample: '32.2426'
Avg. expression score in LCM sample: '19.1808'
Tissue used: 'full endosperm'
AT3G24495 MSH7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.30221 x 10-1 18 11 62.07% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24495 MSH7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 30 10 75.00% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24495 MSH7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.78716 x 10-1 8 7 1 14 53.33% 93.33% 15 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.350396'
Avg. expression score for this sample: '32.3575'
Avg. expression score in LCM sample: '19.1808'
Tissue used: 'pure endosperm, no chalazal'
AT3G24495 MSH7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24495 MSH7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 14 17 6 9 45.16% 60.00% 31 15 TAIR8 Avg. embryo expression (dissected): '92.1075'
Avg. embryo expression (LCM): '106.723'
AT3G24490 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.38244 x 10-1 796 632 368 281 55.74% 43.30% 1428 649 TAIR8 Avg. embryo expression (dissected): '3630.82'
Avg. embryo expression (LCM): '2110.12'
AT3G24490 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.70406 x 10-1 162 60 72.97% 222 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.4 x 10-8 1340 364 505 985 78.64% 66.11% 1704 1490 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000242'
Avg. expression score for this sample: '3112.75'
Avg. expression score in LCM sample: '594.722'
Tissue used: 'full endosperm'
AT3G24490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.66646 x 10-1 944 328 532 742 74.21% 58.24% 1272 1274 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000242'
Avg. expression score for this sample: '2429.84'
Avg. expression score in LCM sample: '594.722'
Tissue used: 'pure endosperm, no chalazal'
AT3G24490 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.7108 x 10-2 919 453 66.98% 1372 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24490 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1589 228 87.45% 1817 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-5 39 0 100.00% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.115 x 10-3 40 3 93.02% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.33423 x 10-1 59 32 22 73 64.84% 76.84% 91 95 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.224916'
Avg. expression score for this sample: '7263.18'
Avg. expression score in LCM sample: '2130.4'
Tissue used: 'pure endosperm, no chalazal'
AT3G24480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.96936 x 10-1 16 3 84.21% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.8705 x 10-1 29 30 7 26 49.15% 78.79% 59 33 TAIR8 Avg. embryo expression (dissected): '9426.47'
Avg. embryo expression (LCM): '1697.61'
AT3G24480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.16964 x 10-1 31 16 6 30 65.96% 83.33% 47 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.224916'
Avg. expression score for this sample: '4639.4'
Avg. expression score in LCM sample: '2130.4'
Tissue used: 'full endosperm'
AT3G24465 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.37588'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G24465 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G24465 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24465 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24465 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G24465 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G24460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 3 2 3 25.00% 60.00% 4 5 TAIR8 Avg. embryo expression (dissected): '4.34882'
Avg. embryo expression (LCM): '1.41912'