Displaying data sets 82201 - 82300 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G25210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.92095 x 10-1 67 23 38 72 74.44% 65.45% 90 110 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000148'
Avg. expression score for this sample: '92.406'
Avg. expression score in LCM sample: '45.3431'
Tissue used: 'pure endosperm, no chalazal'
AT3G25210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.13498 x 10-1 254 86 74.71% 340 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.5 x 10-6 127 13 30 101 90.71% 77.10% 140 131 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000148'
Avg. expression score for this sample: '129.781'
Avg. expression score in LCM sample: '45.3431'
Tissue used: 'full endosperm'
AT3G25210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.4 x 10-5 286 34 89.38% 320 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.8712 x 10-1 17 3 85.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.86327 x 10-1 144 104 44 39 58.06% 46.99% 248 83 TAIR8 Avg. embryo expression (dissected): '241.581'
Avg. embryo expression (LCM): '141.51'
AT3G25200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G25200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G25200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G25190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.833769'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G25190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.86106'
Avg. embryo expression (LCM): '7.23374'
AT3G25190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.295408'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G25190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25180 CYP82G1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25180 CYP82G1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G25180 CYP82G1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25180 CYP82G1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.202948'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G25180 CYP82G1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G25180 CYP82G1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25170 RALFL26 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25170 RALFL26 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 6.95098 x 10-1 0 0 5 8 61.54% 0 13 TAIR8 Avg. embryo expression (dissected): '19.0131'
Avg. embryo expression (LCM): '0'
AT3G25170 RALFL26 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.03932 x 10-1 4 0 47 110 100.00% 70.06% 4 157 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '83.8942'
Avg. expression score in LCM sample: '14.4334'
Tissue used: 'pure endosperm, no chalazal'
AT3G25170 RALFL26 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.7953 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25170 RALFL26 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.6637 x 10-2 4 6 7 0 40.00% 0.00% 10 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.16639'
Avg. expression score in LCM sample: '14.4334'
Tissue used: 'full endosperm'
AT3G25170 RALFL26 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.479 x 10-3 3 9 25.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25165 RALFL25 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25165 RALFL25 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.956573'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G25165 RALFL25 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.41323'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G25165 RALFL25 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G25165 RALFL25 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25165 RALFL25 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.44451 x 10-1 372 175 68.01% 547 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.92095 x 10-1 50 32 29 89 60.98% 75.42% 82 118 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.275467'
Avg. expression score for this sample: '101.074'
Avg. expression score in LCM sample: '68.7569'
Tissue used: 'pure endosperm, no chalazal'
AT3G25160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.236 x 10-3 150 122 55.15% 272 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.2501 x 10-1 298 144 147 194 67.42% 56.89% 442 341 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.275467'
Avg. expression score for this sample: '313.979'
Avg. expression score in LCM sample: '68.7569'
Tissue used: 'full endosperm'
AT3G25160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.58489 x 10-1 72 43 62.61% 115 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.60141 x 10-1 20 35 16 20 36.36% 55.56% 55 36 TAIR8 Avg. embryo expression (dissected): '74.7693'
Avg. embryo expression (LCM): '1.21818'
AT3G25150 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.95101 x 10-1 3255 3147 760 786 50.84% 50.84% 6402 1546 TAIR8 Avg. embryo expression (dissected): '1641.96'
Avg. embryo expression (LCM): '703.444'
AT3G25150 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.66 x 10-4 549 159 77.54% 708 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25150 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.3 x 10-29 3213 814 79.79% 4027 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.0 x 10-18 1990 692 604 1804 74.20% 74.92% 2682 2408 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.4e-14'
Avg. expression score for this sample: '577.415'
Avg. expression score in LCM sample: '242.942'
Tissue used: 'full endosperm'
AT3G25150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.949 x 10-3 2681 1317 1061 2534 67.06% 70.49% 3998 3595 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.4e-14'
Avg. expression score for this sample: '1062.57'
Avg. expression score in LCM sample: '242.942'
Tissue used: 'pure endosperm, no chalazal'
AT3G25150 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2644 552 82.73% 3196 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25140 QUA1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2741 53 98.10% 2794 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25140 QUA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.8 x 10-13 1347 423 568 1506 76.10% 72.61% 1770 2074 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.1e-13'
Avg. expression score for this sample: '822.288'
Avg. expression score in LCM sample: '174.817'
Tissue used: 'full endosperm'
AT3G25140 QUA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.843 x 10-2 373 144 166 391 72.15% 70.20% 517 557 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.1e-13'
Avg. expression score for this sample: '395.367'
Avg. expression score in LCM sample: '174.817'
Tissue used: 'pure endosperm, no chalazal'
AT3G25140 QUA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.2 x 10-6 399 84 82.61% 483 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25140 QUA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.9975 x 10-1 143 124 46 43 53.56% 48.31% 267 89 TAIR8 Avg. embryo expression (dissected): '220.951'
Avg. embryo expression (LCM): '153.956'
AT3G25140 QUA1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 1491 88 94.43% 1579 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25130 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.7406 x 10-2 1 9 10.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.09859 x 10-1 0 0 5 5 50.00% 0 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.1908'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G25130 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.6738 x 10-1 14 13 51.85% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 2 1 5 50.00% 83.33% 4 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.2905'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G25130 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 39 26 19 6 60.00% 24.00% 65 25 TAIR8 Avg. embryo expression (dissected): '47.2636'
Avg. embryo expression (LCM): '17.9713'
AT3G25130 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25120 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25120 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.80172 x 10-1 4 6 1 0 40.00% 0.00% 10 1 TAIR8 Avg. embryo expression (dissected): '18.5501'
Avg. embryo expression (LCM): '21.8519'
AT3G25120 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 18 5 78.26% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.33718 x 10-1 6 1 4 10 85.71% 71.43% 7 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.766355'
Avg. expression score for this sample: '16.281'
Avg. expression score in LCM sample: '13.6397'
Tissue used: 'full endosperm'
AT3G25120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 2 0 4 0.00% 100.00% 2 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.766355'
Avg. expression score for this sample: '10.4967'
Avg. expression score in LCM sample: '13.6397'
Tissue used: 'pure endosperm, no chalazal'
AT3G25120 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.22496 x 10-1 14 1 93.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25110 FaTA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.488 x 10-3 432 159 73.10% 591 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25110 FaTA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.73782 x 10-1 1153 457 779 1391 71.61% 64.10% 1610 2170 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.984331'
Avg. expression score for this sample: '550.167'
Avg. expression score in LCM sample: '355.381'
Tissue used: 'full endosperm'
AT3G25110 FaTA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.4888 758 318 389 589 70.45% 60.22% 1076 978 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.984331'
Avg. expression score for this sample: '581.084'
Avg. expression score in LCM sample: '355.381'
Tissue used: 'pure endosperm, no chalazal'
AT3G25110 FaTA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 754 767 218 230 49.57% 51.34% 1521 448 TAIR8 Avg. embryo expression (dissected): '930.526'
Avg. embryo expression (LCM): '534.882'
AT3G25110 FaTA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 92 46 66.67% 138 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25110 FaTA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.4 x 10-16 551 126 81.39% 677 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25100 CDC45 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.34952 x 10-1 153 92 62.45% 245 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25100 CDC45 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.85329 x 10-1 85 12 62 31 87.63% 33.33% 97 93 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.240612'
Avg. expression score for this sample: '56.8853'
Avg. expression score in LCM sample: '48.5472'
Tissue used: 'pure endosperm, no chalazal'
AT3G25100 CDC45 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.5 x 10-18 240 24 90.91% 264 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25100 CDC45 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.87412 x 10-1 87 11 86 86 88.78% 50.00% 98 172 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.240612'
Avg. expression score for this sample: '33.2453'
Avg. expression score in LCM sample: '48.5472'
Tissue used: 'full endosperm'
AT3G25100 CDC45 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.2 x 10-5 1 13 7.14% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25100 CDC45 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.583 x 10-2 102 38 46 30 72.86% 39.47% 140 76 TAIR8 Avg. embryo expression (dissected): '109.407'
Avg. embryo expression (LCM): '94.9052'
AT3G25099 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G25099 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25099 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25099 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G25099 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G25099 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.741508'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G25090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G25090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G25090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25080 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 11 1 91.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.384541'
Avg. expression score for this sample: '11.9802'
Avg. expression score in LCM sample: '9.08331'
Tissue used: 'pure endosperm, no chalazal'
AT3G25080 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.1677 x 10-1 0 1 0 11 0.00% 100.00% 1 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.384541'
Avg. expression score for this sample: '15.8919'
Avg. expression score in LCM sample: '9.08331'
Tissue used: 'full endosperm'
AT3G25080 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '1.29353'
AT3G25080 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25070 RIN4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.80253 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25070 RIN4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 6.08392 x 10-1 5 2 0 0 71.43% 7 0 TAIR8 Avg. embryo expression (dissected): '30.1201'
Avg. embryo expression (LCM): '22.4422'
AT3G25070 RIN4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.03857 x 10-1 16 1 94.12% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25070 RIN4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.20891 x 10-1 12 3 1 9 80.00% 90.00% 15 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.170634'
Avg. expression score for this sample: '17.5484'
Avg. expression score in LCM sample: '1.3816'
Tissue used: 'full endosperm'