Displaying data sets 82001 - 82100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G25585 AAPT2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25585 AAPT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.047826'
Avg. expression score for this sample: '4.39842'
Avg. expression score in LCM sample: '1.67556'
Tissue used: 'pure endosperm, no chalazal'
AT3G25580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 31 13 18 30 70.45% 62.50% 44 48 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.307578'
Avg. expression score for this sample: '70.388'
Avg. expression score in LCM sample: '78.384'
Tissue used: 'pure endosperm, no chalazal'
AT3G25580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.99011 x 10-1 7 12 5 5 36.84% 50.00% 19 10 TAIR8 Avg. embryo expression (dissected): '50.8606'
Avg. embryo expression (LCM): '51.6283'
AT3G25580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.40917 x 10-1 13 9 59.09% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.2195 x 10-2 83 21 79.81% 104 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.16653 x 10-1 75 17 82 170 81.52% 67.46% 92 252 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.307578'
Avg. expression score for this sample: '155.518'
Avg. expression score in LCM sample: '78.384'
Tissue used: 'full endosperm'
AT3G25580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.0 x 10-7 137 16 89.54% 153 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25577 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25577 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.411646'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G25577 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25577 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G25577 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G25577 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25573 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25573 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G25573 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25573 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G25573 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25573 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.03185'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G25572 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.23077 x 10-1 7 0 1 0 100.00% 0.00% 7 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '23.3569'
Avg. expression score in LCM sample: '66.802'
Tissue used: 'pure endosperm, no chalazal'
AT3G25572 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G25572 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25572 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25572 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25572 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 7 0 4 0 100.00% 0.00% 7 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '26.1008'
Avg. expression score in LCM sample: '66.802'
Tissue used: 'full endosperm'
AT3G25570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.13649 x 10-1 3 2 5 2 60.00% 28.57% 5 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.549897'
Avg. expression score for this sample: '19.6191'
Avg. expression score in LCM sample: '16.6968'
Tissue used: 'full endosperm'
AT3G25570 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25570 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.86667 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 0 4 0 100.00% 0.00% 7 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.549897'
Avg. expression score for this sample: '32.2377'
Avg. expression score in LCM sample: '16.6968'
Tissue used: 'pure endosperm, no chalazal'
AT3G25570 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G25570 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.86667 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25560 NIK2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25560 NIK2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25560 NIK2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 2 0 100.00% 0.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.09358'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G25560 NIK2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '7.57079'
Avg. embryo expression (LCM): '8.38913'
AT3G25560 NIK2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25560 NIK2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.472025'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G25550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '18.3883'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G25550 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '15.5529'
Avg. embryo expression (LCM): '0'
AT3G25550 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25550 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '78.5537'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G25550 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25545 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.3996 x 10-1 16 5 76.19% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25545 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 9 7 14 31 56.25% 68.89% 16 45 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.87298'
Avg. expression score for this sample: '35.0326'
Avg. expression score in LCM sample: '28.2347'
Tissue used: 'full endosperm'
AT3G25545 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 3 66.67% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25545 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.68813 x 10-1 7 4 6 8 63.64% 57.14% 11 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.87298'
Avg. expression score for this sample: '18.069'
Avg. expression score in LCM sample: '28.2347'
Tissue used: 'pure endosperm, no chalazal'
AT3G25545 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.54117 x 10-1 20 14 3 2 58.82% 40.00% 34 5 TAIR8 Avg. embryo expression (dissected): '40.7385'
Avg. embryo expression (LCM): '53.7382'
AT3G25545 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.46082 x 10-1 44 14 75.86% 58 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25540 LAG1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.06023 x 10-1 6 5 54.55% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25540 LAG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 18 6 11 18 75.00% 62.07% 24 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '35.0178'
Avg. expression score in LCM sample: '9.46546'
Tissue used: 'full endosperm'
AT3G25540 LAG1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.56481 x 10-1 26 8 76.47% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25540 LAG1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.23107 x 10-1 9 7 0 3 56.25% 100.00% 16 3 TAIR8 Avg. embryo expression (dissected): '49.2864'
Avg. embryo expression (LCM): '35.5784'
AT3G25540 LAG1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25540 LAG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 2 2 4 33.33% 66.67% 3 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '22.4477'
Avg. expression score in LCM sample: '9.46546'
Tissue used: 'pure endosperm, no chalazal'
AT3G25530 GLYR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.00771 x 10-1 45 21 24 53 68.18% 68.83% 66 77 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.090355'
Avg. expression score for this sample: '136.437'
Avg. expression score in LCM sample: '79.31'
Tissue used: 'pure endosperm, no chalazal'
AT3G25530 GLYR1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.96274 x 10-1 57 81 22 24 41.30% 52.17% 138 46 TAIR8 Avg. embryo expression (dissected): '231.762'
Avg. embryo expression (LCM): '185.214'
AT3G25530 GLYR1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 49 20 71.01% 69 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25530 GLYR1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.1 x 10-10 156 13 92.31% 169 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25530 GLYR1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.1 x 10-18 270 16 94.41% 286 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25530 GLYR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.673 x 10-2 171 61 92 217 73.71% 70.23% 232 309 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.090355'
Avg. expression score for this sample: '236.103'
Avg. expression score in LCM sample: '79.31'
Tissue used: 'full endosperm'
AT3G25520 ATL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.93872 x 10-1 126 72 100 233 63.64% 69.97% 198 333 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.21032'
Avg. expression score for this sample: '2038.55'
Avg. expression score in LCM sample: '1051.71'
Tissue used: 'full endosperm'
AT3G25520 ATL5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.657 x 10-3 411 124 76.82% 535 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25520 ATL5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.97556 x 10-1 89 32 73.55% 121 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25520 ATL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.8704 x 10-2 108 47 38 121 69.68% 76.10% 155 159 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.21032'
Avg. expression score for this sample: '2387.11'
Avg. expression score in LCM sample: '1051.71'
Tissue used: 'pure endosperm, no chalazal'
AT3G25520 ATL5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.12992 x 10-1 258 278 60 74 48.13% 55.22% 536 134 TAIR8 Avg. embryo expression (dissected): '5796.4'
Avg. embryo expression (LCM): '7548.23'
AT3G25520 ATL5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.242 x 10-3 400 123 76.48% 523 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 22 2 91.67% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.21739 x 10-1 6 0 1 6 100.00% 85.71% 6 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.164734'
Avg. expression score for this sample: '2.31014'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G25510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.935383'
Avg. embryo expression (LCM): '0'
AT3G25510 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.164734'
Avg. expression score for this sample: '1.003'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G25500 AFH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.18701 x 10-1 38 11 14 28 77.55% 66.67% 49 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454648'
Avg. expression score for this sample: '124.38'
Avg. expression score in LCM sample: '33.4818'
Tissue used: 'pure endosperm, no chalazal'
AT3G25500 AFH1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 12 10 6 5 54.55% 45.45% 22 11 TAIR8 Avg. embryo expression (dissected): '98.3751'
Avg. embryo expression (LCM): '62.1775'
AT3G25500 AFH1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0741 35 7 83.33% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25500 AFH1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.6 x 10-11 119 5 95.97% 124 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25500 AFH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.73096 x 10-1 102 42 59 117 70.83% 66.48% 144 176 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454648'
Avg. expression score for this sample: '188.109'
Avg. expression score in LCM sample: '33.4818'
Tissue used: 'full endosperm'
AT3G25500 AFH1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.8 x 10-17 147 2 98.66% 149 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25490 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.24033'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G25490 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.615878'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G25490 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.347274'
Avg. embryo expression (LCM): '.753515'
AT3G25490 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.45574 x 10-1 13 3 81.25% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.48931 x 10-1 26 6 13 19 81.25% 59.38% 32 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.740045'
Avg. expression score for this sample: '38.2294'
Avg. expression score in LCM sample: '6.56997'
Tissue used: 'full endosperm'
AT3G25480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.0558 x 10-2 18 2 90.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.2533 x 10-1 15 16 6 4 48.39% 40.00% 31 10 TAIR8 Avg. embryo expression (dissected): '42.2882'
Avg. embryo expression (LCM): '66.2716'
AT3G25480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 10 3 3 4 76.92% 57.14% 13 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.740045'
Avg. expression score for this sample: '15.0139'
Avg. expression score in LCM sample: '6.56997'
Tissue used: 'pure endosperm, no chalazal'
AT3G25470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.48882 x 10-1 162 52 73 109 75.70% 59.89% 214 182 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.048168'
Avg. expression score for this sample: '215.088'
Avg. expression score in LCM sample: '108.294'
Tissue used: 'pure endosperm, no chalazal'
AT3G25470 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.43906 x 10-1 217 177 43 41 55.08% 48.81% 394 84 TAIR8 Avg. embryo expression (dissected): '326.214'
Avg. embryo expression (LCM): '452.234'
AT3G25470 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.803 x 10-3 97 66 59.51% 163 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25470 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.49641 x 10-1 188 63 74.90% 251 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25470 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7 x 10-10 323 52 86.13% 375 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G25470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.3376 x 10-2 291 95 169 361 75.39% 68.11% 386 530 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.048168'
Avg. expression score for this sample: '340.753'
Avg. expression score in LCM sample: '108.294'
Tissue used: 'full endosperm'
AT3G25460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G25460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'