| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT3G26115 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26115 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.04208 x 10-1 | 14 | 7 | 5 | 4 | 66.67% | 44.44% | 21 | 9 | TAIR8 |
Avg. embryo expression (dissected): '23.7026' Avg. embryo expression (LCM): '18.8127' |
||||
| AT3G26115 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.98 x 10-4 | 58 | 7 | 89.23% | 65 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26115 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 24 | 2 | 12 | 4 | 92.31% | 25.00% | 26 | 16 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '18.4029' Avg. expression score in LCM sample: '9.43606' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G26115 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 20 | 8 | 14 | 20 | 71.43% | 58.82% | 28 | 34 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '12.4129' Avg. expression score in LCM sample: '9.43606' Tissue used: 'full endosperm' |
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| AT3G26115 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.88433 x 10-1 | 25 | 11 | 69.44% | 36 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26110 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G26110 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G26110 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.920194' Avg. embryo expression (LCM): '5.96532' |
|||||
| AT3G26110 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G26110 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT3G26110 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '2.87694' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT3G26100 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.12964 x 10-1 | 43 | 27 | 16 | 56 | 61.43% | 77.78% | 70 | 72 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.3e-06' Avg. expression score for this sample: '127.454' Avg. expression score in LCM sample: '24.2369' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G26100 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.7 x 10-7 | 186 | 74 | 54 | 315 | 71.54% | 85.37% | 260 | 369 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.3e-06' Avg. expression score for this sample: '218.331' Avg. expression score in LCM sample: '24.2369' Tissue used: 'full endosperm' |
|||||
| AT3G26100 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 9.2 x 10-16 | 200 | 3 | 98.52% | 203 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26100 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.64 x 10-4 | 76 | 5 | 93.83% | 81 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26100 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 9 | 22 | 6 | 17 | 29.03% | 73.91% | 31 | 23 | TAIR8 |
Avg. embryo expression (dissected): '84.989' Avg. embryo expression (LCM): '26.3981' |
||||
| AT3G26100 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.8 x 10-11 | 226 | 11 | 95.36% | 237 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26090 | RGS1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.7 x 10-6 | 56 | 2 | 96.55% | 58 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G26090 | RGS1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 3 | 2 | 0 | 1 | 60.00% | 100.00% | 5 | 1 | TAIR8 |
Avg. embryo expression (dissected): '10.1387' Avg. embryo expression (LCM): '10.1976' |
|||
| AT3G26090 | RGS1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 2 | 60.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G26090 | RGS1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 25 | 10 | 18 | 34 | 71.43% | 65.38% | 35 | 52 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '38.1588' Avg. expression score in LCM sample: '49.4438' Tissue used: 'full endosperm' |
||||
| AT3G26090 | RGS1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 11 | 2 | 12 | 16 | 84.62% | 57.14% | 13 | 28 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '41.2881' Avg. expression score in LCM sample: '49.4438' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT3G26090 | RGS1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.803 x 10-3 | 18 | 0 | 100.00% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G26085 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.56709 x 10-1 | 99 | 31 | 76.15% | 130 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26085 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.0962 x 10-2 | 3 | 6 | 33.33% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26085 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 7 | 7 | 0 | 0 | 50.00% | 14 | 0 | TAIR8 |
Avg. embryo expression (dissected): '216.497' Avg. embryo expression (LCM): '110.139' |
|||||
| AT3G26085 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.21 x 10-4 | 107 | 13 | 89.17% | 120 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26085 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.20891 x 10-1 | 15 | 1 | 3 | 6 | 93.75% | 66.67% | 16 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.267787' Avg. expression score for this sample: '142.002' Avg. expression score in LCM sample: '44.226' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G26085 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.58609 x 10-1 | 96 | 8 | 53 | 50 | 92.31% | 48.54% | 104 | 103 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.267787' Avg. expression score for this sample: '198.42' Avg. expression score in LCM sample: '44.226' Tissue used: 'full endosperm' |
|||||
| AT3G26080 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.3144 x 10-2 | 61 | 6 | 8 | 11 | 91.04% | 57.89% | 67 | 19 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.21962' Avg. expression score for this sample: '24.6716' Avg. expression score in LCM sample: '4.35058' Tissue used: 'full endosperm' |
|||||
| AT3G26080 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.11635 x 10-1 | 13 | 12 | 7 | 12 | 52.00% | 63.16% | 25 | 19 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.21962' Avg. expression score for this sample: '16.2728' Avg. expression score in LCM sample: '4.35058' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G26080 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.55 x 10-4 | 3 | 10 | 23.08% | 13 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26080 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.1 x 10-5 | 62 | 2 | 96.88% | 64 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26080 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 22 | 20 | 5 | 1 | 52.38% | 16.67% | 42 | 6 | TAIR8 |
Avg. embryo expression (dissected): '21.7605' Avg. embryo expression (LCM): '27.2144' |
||||
| AT3G26080 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.29672 x 10-1 | 5 | 3 | 62.50% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26070 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.06564 x 10-1 | 21 | 12 | 63.64% | 33 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26070 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.5596 x 10-2 | 78 | 42 | 20 | 19 | 65.00% | 48.72% | 120 | 39 | TAIR8 |
Avg. embryo expression (dissected): '147.49' Avg. embryo expression (LCM): '99.7277' |
||||
| AT3G26070 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.8 x 10-12 | 152 | 13 | 92.12% | 165 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26070 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.36094 x 10-1 | 54 | 19 | 15 | 34 | 73.97% | 69.39% | 73 | 49 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '85.2067' Avg. expression score in LCM sample: '27.1911' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G26070 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.95417 x 10-1 | 116 | 73 | 54 | 119 | 61.38% | 68.79% | 189 | 173 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '120.281' Avg. expression score in LCM sample: '27.1911' Tissue used: 'full endosperm' |
|||||
| AT3G26070 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.175 x 10-3 | 69 | 13 | 84.15% | 82 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26060 | PRXQ | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G26060 | PRXQ | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.8597 x 10-2 | 11 | 13 | 45.83% | 24 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G26060 | PRXQ | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.9008 x 10-2 | 73 | 99 | 19 | 7 | 42.44% | 26.92% | 172 | 26 | TAIR8 |
Avg. embryo expression (dissected): '1259.76' Avg. embryo expression (LCM): '723.537' |
|||
| AT3G26060 | PRXQ | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.71964 x 10-1 | 43 | 19 | 69.35% | 62 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G26060 | PRXQ | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 9.34301 x 10-1 | 111 | 44 | 68 | 106 | 71.61% | 60.92% | 155 | 174 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.948727' Avg. expression score for this sample: '506.749' Avg. expression score in LCM sample: '157.268' Tissue used: 'full endosperm' |
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| AT3G26060 | PRXQ | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 80 | 54 | 17 | 62 | 59.70% | 78.48% | 134 | 79 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.948727' Avg. expression score for this sample: '723.923' Avg. expression score in LCM sample: '157.268' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G26050 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.81277 x 10-1 | 38 | 25 | 12 | 45 | 60.32% | 78.95% | 63 | 57 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.937894' Avg. expression score for this sample: '15.523' Avg. expression score in LCM sample: '36.201' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G26050 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 46 | 37 | 48 | 121 | 55.42% | 71.60% | 83 | 169 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.937894' Avg. expression score for this sample: '21.8867' Avg. expression score in LCM sample: '36.201' Tissue used: 'full endosperm' |
|||||
| AT3G26050 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.2 x 10-9 | 805 | 165 | 82.99% | 970 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26050 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 10 | 4 | 71.43% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26050 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 0.0384 | 42 | 96 | 19 | 32 | 30.43% | 62.75% | 138 | 51 | TAIR8 |
Avg. embryo expression (dissected): '36.3998' Avg. embryo expression (LCM): '66.8116' |
||||
| AT3G26050 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.4 x 10-6 | 154 | 161 | 48.89% | 315 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26040 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G26040 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.28571 x 10-1 | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.655353' Avg. embryo expression (LCM): '2.83824' |
|||||
| AT3G26040 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G26040 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.408415' Avg. expression score in LCM sample: '1.10234' Tissue used: 'full endosperm' |
|||||||
| AT3G26040 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.192938' Avg. expression score in LCM sample: '1.10234' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G26040 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G26030 | ATB' DELTA | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.13725 x 10-1 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G26030 | ATB' DELTA | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G26030 | ATB' DELTA | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 2 | 0 | 3 | 33.33% | 100.00% | 3 | 3 | TAIR8 |
Avg. embryo expression (dissected): '27.4046' Avg. embryo expression (LCM): '26.7623' |
|||
| AT3G26030 | ATB' DELTA | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.83871 x 10-1 | 15 | 0 | 100.00% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G26030 | ATB' DELTA | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.44444 x 10-1 | 1 | 0 | 0 | 4 | 100.00% | 100.00% | 1 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.394389' Avg. expression score for this sample: '21.1995' Avg. expression score in LCM sample: '12.9342' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G26030 | ATB' DELTA | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.35117 x 10-1 | 6 | 0 | 2 | 3 | 100.00% | 60.00% | 6 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.394389' Avg. expression score for this sample: '66.4911' Avg. expression score in LCM sample: '12.9342' Tissue used: 'full endosperm' |
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| AT3G26020 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.17 x 10-4 | 74 | 9 | 26 | 87 | 89.16% | 76.99% | 83 | 113 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.005037' Avg. expression score for this sample: '39.6143' Avg. expression score in LCM sample: '19.9451' Tissue used: 'full endosperm' |
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| AT3G26020 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.13677 x 10-1 | 12 | 5 | 10 | 12 | 70.59% | 54.55% | 17 | 22 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.005037' Avg. expression score for this sample: '15.8941' Avg. expression score in LCM sample: '19.9451' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G26020 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.927 x 10-3 | 116 | 11 | 91.34% | 127 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26020 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.9 x 10-5 | 176 | 13 | 93.12% | 189 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26020 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.77512 x 10-1 | 10 | 12 | 2 | 1 | 45.45% | 33.33% | 22 | 3 | TAIR8 |
Avg. embryo expression (dissected): '15.9158' Avg. embryo expression (LCM): '17.6197' |
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| AT3G26020 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.50105 x 10-1 | 7 | 0 | 100.00% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26010 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.5886 x 10-2 | 0 | 3 | 0.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26010 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 3 | 0 | 1 | 0 | 100.00% | 0.00% | 3 | 1 | TAIR8 |
Avg. embryo expression (dissected): '2.07808' Avg. embryo expression (LCM): '0' |
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| AT3G26010 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.1 x 10-7 | 110 | 15 | 88.00% | 125 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26010 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 9.3895 x 10-2 | 42 | 9 | 33 | 6 | 82.35% | 15.38% | 51 | 39 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.493797' Avg. expression score for this sample: '29.0208' Avg. expression score in LCM sample: '45.7105' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G26010 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.85403 x 10-1 | 50 | 0 | 21 | 7 | 100.00% | 25.00% | 50 | 28 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.493797' Avg. expression score for this sample: '21.3794' Avg. expression score in LCM sample: '45.7105' Tissue used: 'full endosperm' |
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| AT3G26010 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.168 x 10-2 | 213 | 186 | 53.38% | 399 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26000 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.56 x 10-4 | 205 | 40 | 83.67% | 245 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26000 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.7 x 10-26 | 377 | 18 | 95.44% | 395 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26000 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.37571 x 10-1 | 101 | 71 | 67 | 46 | 58.72% | 40.71% | 172 | 113 | TAIR8 |
Avg. embryo expression (dissected): '158.617' Avg. embryo expression (LCM): '89.0905' |
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| AT3G26000 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.98405 x 10-1 | 63 | 29 | 68.48% | 92 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G26000 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.481 x 10-3 | 255 | 66 | 117 | 265 | 79.44% | 69.37% | 321 | 382 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.002529' Avg. expression score for this sample: '191.409' Avg. expression score in LCM sample: '111.175' Tissue used: 'full endosperm' |
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| AT3G26000 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.02376 x 10-1 | 130 | 50 | 77 | 170 | 72.22% | 68.83% | 180 | 247 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.002529' Avg. expression score for this sample: '136.955' Avg. expression score in LCM sample: '111.175' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G25990 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 1 | 1 | 4 | 50.00% | 80.00% | 2 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '5.30595' Avg. expression score in LCM sample: '10.7589' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G25990 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 7 | 4 | 2 | 6 | 63.64% | 75.00% | 11 | 8 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '8.4729' Avg. expression score in LCM sample: '10.7589' Tissue used: 'full endosperm' |
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| AT3G25990 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 466 | 197 | 70.29% | 663 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G25990 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G25990 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.2381 x 10-1 | 1 | 4 | 0 | 0 | 20.00% | 5 | 0 | TAIR8 |
Avg. embryo expression (dissected): '7.27539' Avg. embryo expression (LCM): '2.75033' |
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| AT3G25990 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.80102 x 10-1 | 45 | 39 | 53.57% | 84 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G25980 | MAD2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.6 x 10-18 | 214 | 21 | 91.06% | 235 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G25980 | MAD2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.5 x 10-10 | 1052 | 606 | 176 | 113 | 63.45% | 39.10% | 1658 | 289 | TAIR8 |
Avg. embryo expression (dissected): '796.328' Avg. embryo expression (LCM): '482.576' |
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| AT3G25980 | MAD2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 9.7 x 10-6 | 30 | 44 | 40.54% | 74 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G25980 | MAD2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.1 x 10-5 | 361 | 70 | 424 | 323 | 83.76% | 43.24% | 431 | 747 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.740583' Avg. expression score for this sample: '251.551' Avg. expression score in LCM sample: '577.172' Tissue used: 'full endosperm' |
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| AT3G25980 | MAD2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.527 x 10-3 | 1042 | 181 | 320 | 225 | 85.20% | 41.28% | 1223 | 545 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.740583' Avg. expression score for this sample: '542.595' Avg. expression score in LCM sample: '577.172' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G25980 | MAD2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.599 x 10-3 | 130 | 103 | 55.79% | 233 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G25970 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.69662 x 10-1 | 9 | 8 | 52.94% | 17 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G25970 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 1 | 80.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G25970 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.55155 x 10-1 | 23 | 19 | 12 | 5 | 54.76% | 29.41% | 42 | 17 | TAIR8 |
Avg. embryo expression (dissected): '27.6357' Avg. embryo expression (LCM): '37.5501' |
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| AT3G25970 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.1702 x 10-2 | 29 | 3 | 90.62% | 32 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |