Displaying data sets 81401 - 81500 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G26430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.61136 x 10-1 445 145 241 284 75.42% 54.10% 590 525 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.382768'
Avg. expression score for this sample: '18159.8'
Avg. expression score in LCM sample: '5194.26'
Tissue used: 'pure endosperm, no chalazal'
AT3G26430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 686 85 88.98% 771 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26420 ATRZ-1A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 819 87 90.40% 906 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26420 ATRZ-1A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.236 x 10-3 586 185 199 397 76.01% 66.61% 771 596 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.08155'
Avg. expression score for this sample: '5432.07'
Avg. expression score in LCM sample: '4243.44'
Tissue used: 'full endosperm'
AT3G26420 ATRZ-1A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.84003 x 10-1 522 184 277 367 73.94% 56.99% 706 644 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.08155'
Avg. expression score for this sample: '15265.9'
Avg. expression score in LCM sample: '4243.44'
Tissue used: 'pure endosperm, no chalazal'
AT3G26420 ATRZ-1A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.50497 x 10-1 605 307 66.34% 912 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26420 ATRZ-1A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.41849 x 10-1 104 60 63.41% 164 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26420 ATRZ-1A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.25094 x 10-1 533 479 166 132 52.67% 44.30% 1012 298 TAIR8 Avg. embryo expression (dissected): '25842'
Avg. embryo expression (LCM): '7211.06'
AT3G26410 TRM11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.4525 x 10-1 80 91 32 32 46.78% 50.00% 171 64 TAIR8 Avg. embryo expression (dissected): '52.5529'
Avg. embryo expression (LCM): '76.331'
AT3G26410 TRM11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.58782 x 10-1 29 9 76.32% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26410 TRM11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.02327 x 10-1 33 12 11 28 73.33% 71.79% 45 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.578096'
Avg. expression score for this sample: '10.9916'
Avg. expression score in LCM sample: '8.28962'
Tissue used: 'pure endosperm, no chalazal'
AT3G26410 TRM11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.1016 x 10-2 367 226 61.89% 593 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26410 TRM11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.56789 x 10-1 80 23 67 108 77.67% 61.71% 103 175 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.578096'
Avg. expression score for this sample: '27.5147'
Avg. expression score in LCM sample: '8.28962'
Tissue used: 'full endosperm'
AT3G26410 TRM11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.63106 x 10-1 435 180 70.73% 615 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26400 EIF4B1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.3 x 10-8 1085 282 79.37% 1367 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26400 EIF4B1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.648 x 10-3 132 79 62.56% 211 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26400 EIF4B1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 0.6024 216 229 79 73 48.54% 48.03% 445 152 TAIR8 Avg. embryo expression (dissected): '264.513'
Avg. embryo expression (LCM): '205.195'
AT3G26400 EIF4B1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.5 x 10-7 624 286 264 939 68.57% 78.05% 910 1203 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00001'
Avg. expression score for this sample: '344.258'
Avg. expression score in LCM sample: '142.864'
Tissue used: 'full endosperm'
AT3G26400 EIF4B1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.76631 x 10-1 262 166 164 420 61.21% 71.92% 428 584 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00001'
Avg. expression score for this sample: '290.21'
Avg. expression score in LCM sample: '142.864'
Tissue used: 'pure endosperm, no chalazal'
AT3G26400 EIF4B1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.1 x 10-13 1113 246 81.90% 1359 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26390 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G26390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G26390 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26390 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G26390 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26380 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.5416 x 10-2 171 81 67.86% 252 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26380 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.66157 x 10-1 279 210 91 73 57.06% 44.51% 489 164 TAIR8 Avg. embryo expression (dissected): '143.237'
Avg. embryo expression (LCM): '81.4298'
AT3G26380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.647 x 10-2 217 44 109 169 83.14% 60.79% 261 278 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.1e-12'
Avg. expression score for this sample: '84.1432'
Avg. expression score in LCM sample: '25.8683'
Tissue used: 'pure endosperm, no chalazal'
AT3G26380 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1782 48 97.38% 1830 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.3 x 10-11 997 297 379 1025 77.05% 73.01% 1294 1404 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.1e-12'
Avg. expression score for this sample: '257.991'
Avg. expression score in LCM sample: '25.8683'
Tissue used: 'full endosperm'
AT3G26380 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 737 21 97.23% 758 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.717 x 10-3 90 13 87.38% 103 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 12 12 3 2 50.00% 40.00% 24 5 TAIR8 Avg. embryo expression (dissected): '93.2339'
Avg. embryo expression (LCM): '79.7846'
AT3G26370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.06927 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.6408 x 10-2 35 16 19 84 68.63% 81.55% 51 103 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.137953'
Avg. expression score for this sample: '82.0843'
Avg. expression score in LCM sample: '71.3143'
Tissue used: 'full endosperm'
AT3G26370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 19 13 8 19 59.38% 70.37% 32 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.137953'
Avg. expression score for this sample: '83.8053'
Avg. expression score in LCM sample: '71.3143'
Tissue used: 'pure endosperm, no chalazal'
AT3G26370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.2 x 10-7 122 7 94.57% 129 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.44 x 10-4 106 13 89.08% 119 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.3832 x 10-2 45 10 12 48 81.82% 80.00% 55 60 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.119598'
Avg. expression score for this sample: '90.4216'
Avg. expression score in LCM sample: '46.1074'
Tissue used: 'full endosperm'
AT3G26360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 34 26 19 58 56.67% 75.32% 60 77 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.119598'
Avg. expression score for this sample: '129.812'
Avg. expression score in LCM sample: '46.1074'
Tissue used: 'pure endosperm, no chalazal'
AT3G26360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.05941 x 10-1 75 31 70.75% 106 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.706 x 10-3 12 16 42.86% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.27455 x 10-1 70 57 13 16 55.12% 55.17% 127 29 TAIR8 Avg. embryo expression (dissected): '207.614'
Avg. embryo expression (LCM): '203.901'
AT3G26350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.49728 x 10-1 125 41 66 16 75.30% 19.51% 166 82 TAIR8 Avg. embryo expression (dissected): '111.184'
Avg. embryo expression (LCM): '10.5618'
AT3G26350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.3584 x 10-2 2 5 28.57% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.79081 x 10-1 90 7 49 55 92.78% 52.88% 97 104 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00406'
Avg. expression score for this sample: '53.1603'
Avg. expression score in LCM sample: '4.11542'
Tissue used: 'pure endosperm, no chalazal'
AT3G26350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.1 x 10-13 175 5 97.22% 180 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.772 x 10-3 206 22 45 20 90.35% 30.77% 228 65 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00406'
Avg. expression score for this sample: '56.9652'
Avg. expression score in LCM sample: '4.11542'
Tissue used: 'full endosperm'
AT3G26350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 13 4 76.47% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26340 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.9274 x 10-2 29 5 85.29% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.08932 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.02478 x 10-1 13 14 3 1 48.15% 25.00% 27 4 TAIR8 Avg. embryo expression (dissected): '63.4139'
Avg. embryo expression (LCM): '52.2814'
AT3G26340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 9 2 7 12 81.82% 63.16% 11 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '36.1509'
Avg. expression score in LCM sample: '23.9429'
Tissue used: 'full endosperm'
AT3G26340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 18 6 5 4 75.00% 44.44% 24 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '52.6368'
Avg. expression score in LCM sample: '23.9429'
Tissue used: 'pure endosperm, no chalazal'
AT3G26340 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.7516 x 10-2 23 2 92.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26330 CYP71B37 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26330 CYP71B37 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.26981 x 10-1 5 13 5 12 27.78% 70.59% 18 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.350626'
Avg. expression score for this sample: '9.13237'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G26330 CYP71B37 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 3 100.00% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.350626'
Avg. expression score for this sample: '2.39274'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G26330 CYP71B37 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26330 CYP71B37 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.35902 x 10-1 10 7 1 3 58.82% 75.00% 17 4 TAIR8 Avg. embryo expression (dissected): '9.35597'
Avg. embryo expression (LCM): '3.8806'
AT3G26330 CYP71B37 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26320 CYP71B36 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26320 CYP71B36 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.689839'
Avg. embryo expression (LCM): '.841425'
AT3G26320 CYP71B36 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G26320 CYP71B36 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26320 CYP71B36 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.798332'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G26320 CYP71B36 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26310 CYP71B35 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.1 x 10-5 202 177 53.30% 379 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26310 CYP71B35 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.80129 x 10-1 3 10 5 5 23.08% 50.00% 13 10 TAIR8 Avg. embryo expression (dissected): '24.0797'
Avg. embryo expression (LCM): '14.2289'
AT3G26310 CYP71B35 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.9212 x 10-2 10 11 47.62% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26310 CYP71B35 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.20097 x 10-1 81 55 21 65 59.56% 75.58% 136 86 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.733601'
Avg. expression score for this sample: '105.055'
Avg. expression score in LCM sample: '12.7431'
Tissue used: 'full endosperm'
AT3G26310 CYP71B35 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.33968 x 10-1 43 14 10 25 75.44% 71.43% 57 35 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.733601'
Avg. expression score for this sample: '61.2348'
Avg. expression score in LCM sample: '12.7431'
Tissue used: 'pure endosperm, no chalazal'
AT3G26310 CYP71B35 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.9149 x 10-2 144 46 75.79% 190 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26300 CYP71B34 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26300 CYP71B34 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.85816 x 10-1 39 16 19 36 70.91% 65.45% 55 55 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.91137'
Avg. expression score for this sample: '279.966'
Avg. expression score in LCM sample: '124.447'
Tissue used: 'full endosperm'
AT3G26300 CYP71B34 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.96931 x 10-1 31 17 10 12 64.58% 54.55% 48 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.91137'
Avg. expression score for this sample: '301.253'
Avg. expression score in LCM sample: '124.447'
Tissue used: 'pure endosperm, no chalazal'
AT3G26300 CYP71B34 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.22397 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26300 CYP71B34 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 3 66.67% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26300 CYP71B34 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 3 0 1 25.00% 100.00% 4 1 TAIR8 Avg. embryo expression (dissected): '24.963'
Avg. embryo expression (LCM): '6.69372'
AT3G26290 CYP71B26 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 9 1 7 1 90.00% 12.50% 10 8 TAIR8 Avg. embryo expression (dissected): '8.00524'
Avg. embryo expression (LCM): '2.32334'
AT3G26290 CYP71B26 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.42731 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26290 CYP71B26 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.57394 x 10-1 26 0 6 0 100.00% 0.00% 26 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.796121'
Avg. expression score for this sample: '11.597'
Avg. expression score in LCM sample: '10.8912'
Tissue used: 'pure endosperm, no chalazal'
AT3G26290 CYP71B26 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.8 x 10-27 392 4 98.99% 396 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26290 CYP71B26 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.13123 x 10-1 48 2 39 12 96.00% 23.53% 50 51 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.796121'
Avg. expression score for this sample: '18.2991'
Avg. expression score in LCM sample: '10.8912'
Tissue used: 'full endosperm'
AT3G26290 CYP71B26 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.2649 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26280 CYP71B4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26280 CYP71B4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26280 CYP71B4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G26280 CYP71B4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.195472'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G26280 CYP71B4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G26280 CYP71B4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26270 CYP71B25 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.485 x 10-3 189 13 93.56% 202 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26270 CYP71B25 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.485714'
Avg. expression score for this sample: '1.41154'
Avg. expression score in LCM sample: '1.89603'
Tissue used: 'full endosperm'
AT3G26270 CYP71B25 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 2 1 33.33% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.485714'
Avg. expression score for this sample: '.504529'
Avg. expression score in LCM sample: '1.89603'
Tissue used: 'pure endosperm, no chalazal'
AT3G26270 CYP71B25 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.17891 x 10-1 13 138 8.61% 151 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26270 CYP71B25 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G26270 CYP71B25 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 1 0 1 66.67% 100.00% 3 1 TAIR8 Avg. embryo expression (dissected): '2.19484'
Avg. embryo expression (LCM): '0'