Displaying data sets 81201 - 81300 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G26700 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '17.098'
Avg. embryo expression (LCM): '11.9432'
AT3G26700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.01525'
Avg. expression score in LCM sample: '2.20469'
Tissue used: 'pure endosperm, no chalazal'
AT3G26700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.58906'
Avg. expression score in LCM sample: '2.20469'
Tissue used: 'full endosperm'
AT3G26700 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26690 NUDX13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.2 x 10-24 317 23 93.24% 340 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26690 NUDX13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.13122 x 10-1 69 34 20 7 66.99% 25.93% 103 27 TAIR8 Avg. embryo expression (dissected): '145.356'
Avg. embryo expression (LCM): '91.0246'
AT3G26690 NUDX13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.2259 x 10-2 17 19 47.22% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26690 NUDX13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.85 x 10-4 60 10 85.71% 70 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26690 NUDX13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 190 70 89 127 73.08% 58.80% 260 216 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.663382'
Avg. expression score for this sample: '167.076'
Avg. expression score in LCM sample: '12.9489'
Tissue used: 'full endosperm'
AT3G26690 NUDX13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.05261 x 10-1 39 17 24 20 69.64% 45.45% 56 44 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.663382'
Avg. expression score for this sample: '96.8639'
Avg. expression score in LCM sample: '12.9489'
Tissue used: 'pure endosperm, no chalazal'
AT3G26680 SNM1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 2 0 2 50.00% 100.00% 4 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002607'
Avg. expression score for this sample: '21.7935'
Avg. expression score in LCM sample: '31.1743'
Tissue used: 'pure endosperm, no chalazal'
AT3G26680 SNM1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.71 x 10-4 14 2 0 28 87.50% 100.00% 16 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002607'
Avg. expression score for this sample: '22.7284'
Avg. expression score in LCM sample: '31.1743'
Tissue used: 'full endosperm'
AT3G26680 SNM1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.28458 x 10-1 60 4 93.75% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26680 SNM1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.18391 x 10-1 57 13 81.43% 70 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26680 SNM1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26680 SNM1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 4 2 0 2 66.67% 100.00% 6 2 TAIR8 Avg. embryo expression (dissected): '44.4444'
Avg. embryo expression (LCM): '40.2502'
AT3G26670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '17.4173'
Avg. embryo expression (LCM): '19.7421'
AT3G26670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '26.9397'
Avg. expression score in LCM sample: '10.7295'
Tissue used: 'full endosperm'
AT3G26670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '11.772'
Avg. expression score in LCM sample: '10.7295'
Tissue used: 'pure endosperm, no chalazal'
AT3G26670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26660 LBD24 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26660 LBD24 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26660 LBD24 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26660 LBD24 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.39276'
Avg. embryo expression (LCM): '0'
AT3G26660 LBD24 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.43135'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G26660 LBD24 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.37743'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G26650 GAPA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2017.72'
Avg. expression score in LCM sample: '546.63'
Tissue used: 'full endosperm'
AT3G26650 GAPA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1187.26'
Avg. expression score in LCM sample: '546.63'
Tissue used: 'pure endosperm, no chalazal'
AT3G26650 GAPA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26650 GAPA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1970.9'
Avg. embryo expression (LCM): '810.832'
AT3G26650 GAPA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26650 GAPA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26640 LWD2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 3 40.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26640 LWD2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26640 LWD2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '232.42'
Avg. embryo expression (LCM): '157.359'
AT3G26640 LWD2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '183.964'
Avg. expression score in LCM sample: '80.7944'
Tissue used: 'pure endosperm, no chalazal'
AT3G26640 LWD2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.85714 x 10-1 1 2 1 0 33.33% 0.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '122.817'
Avg. expression score in LCM sample: '80.7944'
Tissue used: 'full endosperm'
AT3G26640 LWD2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.0888 x 10-2 13 1 92.86% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1 x 10-4 149 17 89.76% 166 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26630 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 11 14 3 4 44.00% 57.14% 25 7 TAIR8 Avg. embryo expression (dissected): '20.7599'
Avg. embryo expression (LCM): '11.6669'
AT3G26630 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.9961 x 10-2 29 2 93.55% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.05302 x 10-1 126 45 73.68% 171 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.8833 x 10-2 46 14 20 63 76.67% 75.90% 60 83 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.119818'
Avg. expression score for this sample: '36.6375'
Avg. expression score in LCM sample: '8.20144'
Tissue used: 'full endosperm'
AT3G26630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 23 12 4 13 65.71% 76.47% 35 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.119818'
Avg. expression score for this sample: '18.8758'
Avg. expression score in LCM sample: '8.20144'
Tissue used: 'pure endosperm, no chalazal'
AT3G26620 LBD23 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.704435'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G26620 LBD23 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.994111'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G26620 LBD23 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26620 LBD23 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26620 LBD23 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26620 LBD23 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G26618 ERF1-3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '89.1796'
Avg. embryo expression (LCM): '123.275'
AT3G26618 ERF1-3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26618 ERF1-3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26618 ERF1-3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '266.492'
Avg. expression score in LCM sample: '105.178'
Tissue used: 'full endosperm'
AT3G26618 ERF1-3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '111.374'
Avg. expression score in LCM sample: '105.178'
Tissue used: 'pure endosperm, no chalazal'
AT3G26618 ERF1-3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26616 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26616 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26616 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26616 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G26616 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.614398'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G26616 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 0 0 0 100.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.98702'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G26612 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.9006 x 10-2 26 0 8 11 100.00% 57.89% 26 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.114758'
Avg. expression score for this sample: '17.7258'
Avg. expression score in LCM sample: '14.4627'
Tissue used: 'full endosperm'
AT3G26612 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 9 0 5 4 100.00% 44.44% 9 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.114758'
Avg. expression score for this sample: '7.62891'
Avg. expression score in LCM sample: '14.4627'
Tissue used: 'pure endosperm, no chalazal'
AT3G26612 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7649 x 10-2 22 0 100.00% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26612 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 3.8461 x 10-2 8 0 0 0 100.00% 8 0 TAIR8 Avg. embryo expression (dissected): '3.17291'
Avg. embryo expression (LCM): '4.11921'
AT3G26612 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.0481 x 10-2 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26612 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.26967 x 10-1 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26610 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26610 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26610 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.45455 x 10-1 1 4 1 0 20.00% 0.00% 5 1 TAIR8 Avg. embryo expression (dissected): '3.89043'
Avg. embryo expression (LCM): '0'
AT3G26610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.152968'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G26610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.0381'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G26610 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26600 ARO4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.1294 x 10-2 26 1 96.30% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26600 ARO4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 4 2 0 55.56% 0.00% 9 2 TAIR8 Avg. embryo expression (dissected): '113.746'
Avg. embryo expression (LCM): '76.7455'
AT3G26600 ARO4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.42857 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26600 ARO4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26600 ARO4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 0 1 2 100.00% 66.67% 4 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '128.587'
Avg. expression score in LCM sample: '48.121'
Tissue used: 'full endosperm'
AT3G26600 ARO4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 3 1 100.00% 25.00% 2 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '104.805'
Avg. expression score in LCM sample: '48.121'
Tissue used: 'pure endosperm, no chalazal'
AT3G26590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.13649 x 10-1 3 2 5 2 60.00% 28.57% 5 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.778551'
Avg. expression score for this sample: '16.1413'
Avg. expression score in LCM sample: '20.6653'
Tissue used: 'pure endosperm, no chalazal'
AT3G26590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 4 10 100.00% 71.43% 1 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.778551'
Avg. expression score for this sample: '10.8719'
Avg. expression score in LCM sample: '20.6653'
Tissue used: 'full endosperm'
AT3G26590 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.20872 x 10-1 10 1 90.91% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26590 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.00285 x 10-1 13 16 44.83% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26590 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26590 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '3.00202'
Avg. embryo expression (LCM): '0'
AT3G26580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '297.799'
Avg. embryo expression (LCM): '130.458'
AT3G26580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.66667 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 3 1 3 25.00% 75.00% 4 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '487.787'
Avg. expression score in LCM sample: '202.802'
Tissue used: 'full endosperm'
AT3G26580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '508.139'
Avg. expression score in LCM sample: '202.802'
Tissue used: 'pure endosperm, no chalazal'
AT3G26580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26570 PHT2;1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26570 PHT2;1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26570 PHT2;1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G26570 PHT2;1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '719.896'
Avg. embryo expression (LCM): '596.746'
AT3G26570 PHT2;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '401.384'
Avg. expression score in LCM sample: '205.653'
Tissue used: 'pure endosperm, no chalazal'
AT3G26570 PHT2;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '178.074'
Avg. expression score in LCM sample: '205.653'
Tissue used: 'full endosperm'