| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G342649 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G342649 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 6 | 100.00% | 0 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G342588 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.766573 x 10-1 | 48 | 44 | 43 | 23 | 52.17% | 34.85% | 92 | 66 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6766573' χ2 p-value for Mo17 x B73: '.013823' Biased in favor of strain: '' |
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| GRMZM2G342588 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.683709 x 10-1 | 11 | 9 | 22 | 22 | 55.00% | 50.00% | 20 | 44 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2683709' χ2 p-value for Mo17 x B73: '.0190165' Biased in favor of strain: '' |
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| GRMZM2G342515 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 21920 | 11 | 20103 | 22 | 99.95% | 0.11% | 21931 | 20125 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G342515 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 9150 | 21 | 6604 | 64 | 99.77% | 0.96% | 9171 | 6668 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G342424 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.67 x 10-22 | 0 | 92 | 0 | 105 | 0.00% | 100.00% | 92 | 105 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.67e-22' χ2 p-value for Mo17 x B73: '1.22e-24' Biased in favor of strain: 'Mo17' |
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| GRMZM2G342424 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.74 x 10-6 | 0 | 31 | 0 | 40 | 0.00% | 100.00% | 31 | 40 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.43e-15' χ2 p-value for Mo17 x B73: '7.74e-06' Biased in favor of strain: 'Mo17' |
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| GRMZM2G342386 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.967056 x 10-1 | 15 | 5 | 10 | 5 | 75.00% | 33.33% | 20 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.1967056' Biased in favor of strain: '' |
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| GRMZM2G342386 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 17 | 11 | 100.00% | 39.29% | 3 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.0021156' Biased in favor of strain: '' |
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| GRMZM2G342327 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.266235 x 10-1 | 209 | 185 | 242 | 171 | 53.05% | 41.40% | 394 | 413 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2266235' χ2 p-value for Mo17 x B73: '.0004764' Biased in favor of strain: '' |
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| GRMZM2G342327 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.635524 x 10-1 | 14 | 3 | 5 | 5 | 82.35% | 50.00% | 17 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1700716' χ2 p-value for Mo17 x B73: '.2635524' Biased in favor of strain: '' |
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| GRMZM2G342281 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 1 | 4 | 0.00% | 80.00% | 2 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: '' |
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| GRMZM2G342281 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 7 | 0.00% | 100.00% | 2 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.0613688' Biased in favor of strain: '' |
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| GRMZM2G342246 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 4 | 7 | 50.00% | 63.64% | 2 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.3657123' Biased in favor of strain: '' |
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| GRMZM2G342246 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G342243 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.84 x 10-6 | 1192 | 501 | 777 | 600 | 70.41% | 43.57% | 1693 | 1377 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.84e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G342243 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 5228 | 1639 | 2893 | 3609 | 76.13% | 55.51% | 6867 | 6502 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G342105 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.69224 x 10-2 | 103 | 130 | 76 | 115 | 44.21% | 60.21% | 233 | 191 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0769224' χ2 p-value for Mo17 x B73: '.0047734' Biased in favor of strain: '' |
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| GRMZM2G342105 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.295684 x 10-1 | 43 | 42 | 21 | 43 | 50.59% | 67.19% | 85 | 64 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0016631' χ2 p-value for Mo17 x B73: '.9295684' Biased in favor of strain: '' |
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| GRMZM2G342039 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.223753 x 10-1 | 384 | 239 | 200 | 213 | 61.64% | 51.57% | 623 | 413 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.27e-09' χ2 p-value for Mo17 x B73: '.5223753' Biased in favor of strain: '' |
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| GRMZM2G342039 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.934935 x 10-1 | 872 | 458 | 414 | 1040 | 65.56% | 71.53% | 1330 | 1454 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3934935' χ2 p-value for Mo17 x B73: '.0000845' Biased in favor of strain: '' |
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| GRMZM2G341959 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.23 x 10-6 | 755 | 582 | 833 | 531 | 56.47% | 38.93% | 1337 | 1364 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.23e-06' χ2 p-value for Mo17 x B73: '2.91e-16' Biased in favor of strain: 'B73' |
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| GRMZM2G341959 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 7 | 5 | 13 | 22.22% | 72.22% | 9 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046774' χ2 p-value for Mo17 x B73: '.6170752' Biased in favor of strain: '' |
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| GRMZM2G341957 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 1 | 0.00% | 100.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G341957 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 0 | 0 | 0.00% | 3 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G341934 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.394119 x 10-1 | 90 | 70 | 85 | 79 | 56.25% | 48.17% | 160 | 164 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138463' χ2 p-value for Mo17 x B73: '.6394119' Biased in favor of strain: '' |
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| GRMZM2G341934 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.23673 x 10-1 | 236 | 137 | 88 | 168 | 63.27% | 65.62% | 373 | 256 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1641117' χ2 p-value for Mo17 x B73: '.723673' Biased in favor of strain: '' |
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| GRMZM2G341918 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 2 | 3 | 1 | 75.00% | 25.00% | 8 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G341918 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 1 | 7 | 50.00% | 87.50% | 2 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.2112996' Biased in favor of strain: '' |
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| GRMZM2G341747 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 83 | 83 | 58 | 60 | 50.00% | 50.85% | 166 | 118 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.8539233' Biased in favor of strain: '' |
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| GRMZM2G341747 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.50544 x 10-2 | 109 | 75 | 95 | 146 | 59.24% | 60.58% | 184 | 241 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.03257' χ2 p-value for Mo17 x B73: '.0450544' Biased in favor of strain: '' |
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| GRMZM2G341741 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.272755 x 10-1 | 47 | 36 | 33 | 21 | 56.63% | 38.89% | 83 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2272755' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: '' |
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| GRMZM2G341741 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.67792 x 10-2 | 42 | 10 | 20 | 23 | 80.77% | 53.49% | 52 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0309862' χ2 p-value for Mo17 x B73: '.0667792' Biased in favor of strain: '' |
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| GRMZM2G341732 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 918 | 438 | 797 | 377 | 67.70% | 32.11% | 1356 | 1174 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.74e-39' χ2 p-value for Mo17 x B73: '1.52e-34' Biased in favor of strain: 'B73' |
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| GRMZM2G341732 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.21 x 10-23 | 825 | 189 | 533 | 543 | 81.36% | 50.46% | 1014 | 1076 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.21e-23' χ2 p-value for Mo17 x B73: '1.76e-29' Biased in favor of strain: 'B73' |
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| GRMZM2G341658 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 4 | 3 | 1 | 33.33% | 25.00% | 6 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G341658 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G341621 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1636 | 822 | 1548 | 862 | 66.56% | 35.77% | 2458 | 2410 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G341621 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.08 x 10-14 | 1591 | 543 | 665 | 870 | 74.55% | 56.68% | 2134 | 1535 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.08e-14' χ2 p-value for Mo17 x B73: '1.02e-16' Biased in favor of strain: 'B73' |
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| GRMZM2G341479 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 17 | 17 | 25 | 21 | 50.00% | 45.65% | 34 | 46 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.5553463' Biased in favor of strain: '' |
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| GRMZM2G341479 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.815115 x 10-1 | 13 | 8 | 8 | 18 | 61.90% | 69.23% | 21 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6434122' χ2 p-value for Mo17 x B73: '.7815115' Biased in favor of strain: '' |
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| GRMZM2G341460 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.014538 x 10-1 | 25 | 38 | 12 | 30 | 39.68% | 71.43% | 63 | 42 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1014538' χ2 p-value for Mo17 x B73: '.0054786' Biased in favor of strain: '' |
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| GRMZM2G341460 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G341405 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.266305 x 10-1 | 14 | 2 | 14 | 7 | 87.50% | 33.33% | 16 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026998' χ2 p-value for Mo17 x B73: '.1266305' Biased in favor of strain: '' |
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| GRMZM2G341405 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 11 | 21 | 100.00% | 65.62% | 4 | 32 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.9005233' Biased in favor of strain: '' |
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| GRMZM2G341378 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 0 | 0.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G341378 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G341304 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.230633 x 10-1 | 39 | 41 | 42 | 22 | 48.75% | 34.38% | 80 | 64 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8230633' χ2 p-value for Mo17 x B73: '.0124193' Biased in favor of strain: '' |
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| GRMZM2G341304 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 15 | 0 | 0 | 0 | 100.00% | 15 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G341302 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 1 | 100.00% | 50.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G341302 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G341271 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.59807 x 10-2 | 518 | 609 | 422 | 482 | 45.96% | 53.32% | 1127 | 904 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0067144' χ2 p-value for Mo17 x B73: '.0459807' Biased in favor of strain: 'Mo17' |
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| GRMZM2G341271 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.97528 x 10-2 | 590 | 349 | 354 | 821 | 62.83% | 69.87% | 939 | 1175 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0126914' χ2 p-value for Mo17 x B73: '.0197528' Biased in favor of strain: '' |
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| GRMZM2G341269 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.1314 x 10-1 | 43 | 59 | 50 | 69 | 42.16% | 57.98% | 102 | 119 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.11314' χ2 p-value for Mo17 x B73: '.0815562' Biased in favor of strain: '' |
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| GRMZM2G341269 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.790995 x 10-1 | 14 | 10 | 10 | 16 | 58.33% | 61.54% | 24 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3864619' χ2 p-value for Mo17 x B73: '.5790995' Biased in favor of strain: '' |
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| GRMZM2G341216 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.33422 x 10-2 | 44 | 68 | 71 | 39 | 39.29% | 35.45% | 112 | 110 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0233422' χ2 p-value for Mo17 x B73: '.0022802' Biased in favor of strain: '' |
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| GRMZM2G341216 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.31392 x 10-2 | 8 | 11 | 1 | 21 | 42.11% | 95.45% | 19 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0231392' χ2 p-value for Mo17 x B73: '.0041786' Biased in favor of strain: '' |
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| GRMZM2G341089 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.397453 x 10-1 | 107 | 87 | 85 | 73 | 55.15% | 46.20% | 194 | 158 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1510262' χ2 p-value for Mo17 x B73: '.3397453' Biased in favor of strain: '' |
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| GRMZM2G341089 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.316849 x 10-1 | 12 | 12 | 11 | 15 | 50.00% | 57.69% | 24 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832594' χ2 p-value for Mo17 x B73: '.3316849' Biased in favor of strain: '' |
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| GRMZM2G341058 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.206714 x 10-1 | 9 | 15 | 6 | 13 | 37.50% | 68.42% | 24 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206714' χ2 p-value for Mo17 x B73: '.1082937' Biased in favor of strain: '' |
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| GRMZM2G341058 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 15 | 3 | 7 | 0 | 83.33% | 0.00% | 18 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1336183' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: '' |
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| GRMZM2G341036 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.36 x 10-17 | 1058 | 679 | 1364 | 953 | 60.91% | 41.13% | 1737 | 2317 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.57e-20' χ2 p-value for Mo17 x B73: '1.36e-17' Biased in favor of strain: 'B73' |
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| GRMZM2G341036 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.01665 x 10-1 | 261 | 127 | 153 | 297 | 67.27% | 66.00% | 388 | 450 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.801665' χ2 p-value for Mo17 x B73: '.7641764' Biased in favor of strain: '' |
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| GRMZM2G341027 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.663859 x 10-1 | 239 | 271 | 225 | 213 | 46.86% | 48.63% | 510 | 438 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1564877' χ2 p-value for Mo17 x B73: '.5663859' Biased in favor of strain: '' |
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| GRMZM2G341027 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 0.0 | 23 | 358 | 390 | 151 | 6.04% | 27.91% | 381 | 541 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G341010 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.862343 x 10-1 | 49 | 7 | 70 | 62 | 87.50% | 46.97% | 56 | 132 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.99e-08' χ2 p-value for Mo17 x B73: '.4862343' Biased in favor of strain: '' |
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| GRMZM2G341010 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.2836 x 10-3 | 26 | 2 | 152 | 136 | 92.86% | 47.22% | 28 | 288 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0032836' χ2 p-value for Mo17 x B73: '2.56e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G340955 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G340955 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 18 | 0 | 0 | 0 | 100.00% | 18 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G340935 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G340935 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 19 | 0 | 0 | 0 | 100.00% | 19 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G340933 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.327676 x 10-1 | 59 | 50 | 56 | 48 | 54.13% | 46.15% | 109 | 104 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3886635' χ2 p-value for Mo17 x B73: '.4327676' Biased in favor of strain: '' |
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| GRMZM2G340933 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.09747 x 10-2 | 84 | 26 | 19 | 74 | 76.36% | 79.57% | 110 | 93 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0309747' χ2 p-value for Mo17 x B73: '.0082992' Biased in favor of strain: '' |
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| GRMZM2G340756 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.130938 x 10-1 | 182 | 153 | 180 | 146 | 54.33% | 44.79% | 335 | 326 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1130938' χ2 p-value for Mo17 x B73: '.0596887' Biased in favor of strain: '' |
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| GRMZM2G340756 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.82919 x 10-1 | 160 | 77 | 97 | 116 | 67.51% | 54.46% | 237 | 213 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.782919' χ2 p-value for Mo17 x B73: '.0001574' Biased in favor of strain: '' |
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| GRMZM2G340749 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 2 | 0.00% | 100.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G340749 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 0 | 0 | 66.67% | 3 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G340656 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.365862 x 10-1 | 446 | 432 | 602 | 567 | 50.80% | 48.50% | 878 | 1169 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6365862' χ2 p-value for Mo17 x B73: '.3059903' Biased in favor of strain: '' |
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| GRMZM2G340656 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.625666 x 10-1 | 59 | 49 | 76 | 151 | 54.63% | 66.52% | 108 | 227 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0079621' χ2 p-value for Mo17 x B73: '.9625666' Biased in favor of strain: '' |
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| GRMZM2G340654 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G340654 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.90165 x 10-2 | 0 | 16 | 0 | 11 | 0.00% | 100.00% | 16 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.54e-08' χ2 p-value for Mo17 x B73: '.0190165' Biased in favor of strain: '' |
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| GRMZM2G340619 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.14 x 10-23 | 108 | 3 | 198 | 3 | 97.30% | 1.49% | 111 | 201 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.14e-23' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G340619 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.21 x 10-7 | 56 | 0 | 27 | 0 | 100.00% | 0.00% | 56 | 27 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.21e-07' χ2 p-value for Mo17 x B73: '2.00e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G340618 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 3 | 0 | 100.00% | 0.00% | 5 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G340618 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G340578 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.309012 x 10-1 | 67 | 66 | 22 | 57 | 50.38% | 72.15% | 133 | 79 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9309012' χ2 p-value for Mo17 x B73: '.0000822' Biased in favor of strain: '' |
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| GRMZM2G340578 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 1 | 10 | 10 | 80.00% | 50.00% | 5 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5270948' χ2 p-value for Mo17 x B73: '.1138462' Biased in favor of strain: '' |
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| GRMZM2G340534 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 5 | 4 | 2 | 54.55% | 33.33% | 11 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7630246' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: '' |
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| GRMZM2G340534 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.319 x 10-3 | 48 | 6 | 22 | 16 | 88.89% | 42.11% | 54 | 38 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0005321' χ2 p-value for Mo17 x B73: '.001319' Biased in favor of strain: 'B73' |
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| GRMZM2G340527 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.513083 x 10-1 | 122 | 137 | 115 | 95 | 47.10% | 45.24% | 259 | 210 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3513083' χ2 p-value for Mo17 x B73: '.1675463' Biased in favor of strain: '' |
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| GRMZM2G340527 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.725191 x 10-1 | 44 | 18 | 27 | 39 | 70.97% | 59.09% | 62 | 66 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4725191' χ2 p-value for Mo17 x B73: '.1916945' Biased in favor of strain: '' |
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| GRMZM2G340456 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G340456 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 5 | 0 | 0.00% | 0 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G340444 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0248 x 10-3 | 66 | 30 | 67 | 34 | 68.75% | 33.66% | 96 | 101 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002386' χ2 p-value for Mo17 x B73: '.0010248' Biased in favor of strain: 'B73' |
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| GRMZM2G340444 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 0 | 5 | 0 | 100.00% | 0.00% | 9 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0338955' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: '' |
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| GRMZM2G340408 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.87 x 10-26 | 328 | 83 | 302 | 91 | 79.81% | 23.16% | 411 | 393 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.27e-33' χ2 p-value for Mo17 x B73: '1.87e-26' Biased in favor of strain: 'B73' |
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| GRMZM2G340408 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 619 | 71 | 336 | 93 | 89.71% | 21.68% | 690 | 429 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.75e-38' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G340359 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.348273 x 10-1 | 39 | 19 | 11 | 12 | 67.24% | 52.17% | 58 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0086362' χ2 p-value for Mo17 x B73: '.8348273' Biased in favor of strain: '' |
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| GRMZM2G340359 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.9 x 10-5 | 55 | 6 | 45 | 24 | 90.16% | 34.78% | 61 | 69 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000099' χ2 p-value for Mo17 x B73: '1.93e-08' Biased in favor of strain: 'B73' |