| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G55670 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.76779 x 10-1 | 206 | 220 | 85 | 111 | 48.36% | 56.63% | 426 | 196 | TAIR8 |
Avg. embryo expression (dissected): '3164.27' Avg. embryo expression (LCM): '1422.33' |
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| AT5G55670 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 54 | 22 | 71.05% | 76 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55670 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.20367 x 10-1 | 254 | 114 | 69.02% | 368 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55670 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.6 x 10-5 | 424 | 108 | 79.70% | 532 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55660 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 11524 | 8277 | 8068 | 11322 | 58.20% | 58.39% | 19801 | 19390 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '12842' Avg. expression score in LCM sample: '491.851' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G55660 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.83086 x 10-1 | 12241 | 5546 | 6069 | 10586 | 68.82% | 63.56% | 17787 | 16655 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '10326.6' Avg. expression score in LCM sample: '491.851' Tissue used: 'full endosperm' |
|||||
| AT5G55660 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.0709 x 10-1 | 11284 | 11159 | 5173 | 5220 | 50.28% | 50.23% | 22443 | 10393 | TAIR8 |
Avg. embryo expression (dissected): '17359.7' Avg. embryo expression (LCM): '4990' |
||||
| AT5G55660 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.5 x 10-25 | 880 | 271 | 76.46% | 1151 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55660 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.40111 x 10-1 | 12143 | 7392 | 62.16% | 19535 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55660 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 21594 | 5556 | 79.54% | 27150 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '6.10524' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT5G55650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 0 | 1 | 1 | 100.00% | 50.00% | 1 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '4.02157' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT5G55650 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.80172 x 10-1 | 2 | 7 | 0 | 2 | 22.22% | 100.00% | 9 | 2 | TAIR8 |
Avg. embryo expression (dissected): '30.8196' Avg. embryo expression (LCM): '43.302' |
||||
| AT5G55650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G55650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.4 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55650 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G55640 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 2 | 0 | 3 | 0.00% | 100.00% | 2 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '860.525' Avg. expression score in LCM sample: '238.885' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G55640 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 3 | 3 | 1 | 8 | 50.00% | 88.89% | 6 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '695.176' Avg. expression score in LCM sample: '238.885' Tissue used: 'full endosperm' |
|||||
| AT5G55640 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 3 | 0 | 0 | 25.00% | 4 | 0 | TAIR8 |
Avg. embryo expression (dissected): '969.351' Avg. embryo expression (LCM): '761.125' |
|||||
| AT5G55640 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G55640 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.71706 x 10-1 | 9 | 1 | 90.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55640 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.88707 x 10-1 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55630 | KCO1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 1 | 3 | 75.00% | 0 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '42.4071' Avg. expression score in LCM sample: '38.6996' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G55630 | KCO1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 8 | 14 | 3 | 24 | 36.36% | 88.89% | 22 | 27 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '78.0776' Avg. expression score in LCM sample: '38.6996' Tissue used: 'full endosperm' |
||||
| AT5G55630 | KCO1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 2 | 0 | 0 | 0.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '47.6286' Avg. embryo expression (LCM): '16.9164' |
||||
| AT5G55630 | KCO1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.96537 x 10-1 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G55630 | KCO1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.15224 x 10-1 | 10 | 2 | 83.33% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G55630 | KCO1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.5326 x 10-1 | 8 | 1 | 88.89% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G55620 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 17 | 10 | 4 | 7 | 62.96% | 63.64% | 27 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.197251' Avg. expression score for this sample: '33.572' Avg. expression score in LCM sample: '3.98313' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G55620 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.29359 x 10-1 | 155 | 102 | 62 | 118 | 60.31% | 65.56% | 257 | 180 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.197251' Avg. expression score for this sample: '300.527' Avg. expression score in LCM sample: '3.98313' Tissue used: 'full endosperm' |
|||||
| AT5G55620 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.29008 x 10-1 | 69 | 62 | 9 | 10 | 52.67% | 52.63% | 131 | 19 | TAIR8 |
Avg. embryo expression (dissected): '213.459' Avg. embryo expression (LCM): '226.632' |
||||
| AT5G55620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.99599 x 10-1 | 47 | 24 | 66.20% | 71 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.59635 x 10-1 | 1 | 2 | 33.33% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55620 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.03949 x 10-1 | 6 | 9 | 40.00% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55610 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.29827 x 10-1 | 63 | 28 | 39 | 63 | 69.23% | 61.76% | 91 | 102 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.377885' Avg. expression score for this sample: '65.242' Avg. expression score in LCM sample: '75.0476' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G55610 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.15309 x 10-1 | 65 | 15 | 26 | 60 | 81.25% | 69.77% | 80 | 86 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.377885' Avg. expression score for this sample: '68.2325' Avg. expression score in LCM sample: '75.0476' Tissue used: 'full endosperm' |
|||||
| AT5G55610 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 9.00544 x 10-1 | 54 | 53 | 12 | 8 | 50.47% | 40.00% | 107 | 20 | TAIR8 |
Avg. embryo expression (dissected): '80.3183' Avg. embryo expression (LCM): '97.9695' |
||||
| AT5G55610 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 22 | 9 | 70.97% | 31 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55610 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.3854 x 10-2 | 82 | 51 | 61.65% | 133 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55610 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.083 x 10-3 | 156 | 37 | 80.83% | 193 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55600 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 9.6205 x 10-2 | 72 | 18 | 18 | 41 | 80.00% | 69.49% | 90 | 59 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '2.0e-12' Avg. expression score for this sample: '183.098' Avg. expression score in LCM sample: '98.6524' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G55600 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.6 x 10-12 | 378 | 77 | 181 | 588 | 83.08% | 76.46% | 455 | 769 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '2.0e-12' Avg. expression score for this sample: '450.602' Avg. expression score in LCM sample: '98.6524' Tissue used: 'full endosperm' |
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| AT5G55600 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 42 | 44 | 10 | 12 | 48.84% | 54.55% | 86 | 22 | TAIR8 |
Avg. embryo expression (dissected): '221.768' Avg. embryo expression (LCM): '142.05' |
||||
| AT5G55600 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.1902 x 10-2 | 83 | 10 | 89.25% | 93 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55600 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.43 x 10-4 | 511 | 86 | 85.59% | 597 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55600 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.3 x 10-15 | 835 | 85 | 90.76% | 920 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55590 | QRT1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '37.1124' Avg. expression score in LCM sample: '48.7236' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G55590 | QRT1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '32.1849' Avg. expression score in LCM sample: '48.7236' Tissue used: 'full endosperm' |
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| AT5G55590 | QRT1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '12.0072' Avg. embryo expression (LCM): '3.86804' |
|||||
| AT5G55590 | QRT1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55590 | QRT1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55590 | QRT1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55580 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '4.27667' Avg. expression score in LCM sample: '.676104' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G55580 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '9.99325' Avg. expression score in LCM sample: '.676104' Tissue used: 'full endosperm' |
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| AT5G55580 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '18.5418' Avg. embryo expression (LCM): '27.227' |
||||||
| AT5G55580 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G55580 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G55580 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G55570 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT5G55570 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.226461' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT5G55570 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.393388' Avg. embryo expression (LCM): '0' |
||||||
| AT5G55570 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G55570 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G55570 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G55565 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT5G55565 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT5G55565 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT5G55565 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G55565 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G55565 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G55560 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.96553 x 10-1 | 23 | 11 | 11 | 12 | 67.65% | 52.17% | 34 | 23 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.206322' Avg. expression score for this sample: '37.542' Avg. expression score in LCM sample: '40.3311' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G55560 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.2741 x 10-2 | 41 | 3 | 6 | 15 | 93.18% | 71.43% | 44 | 21 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.206322' Avg. expression score for this sample: '47.3748' Avg. expression score in LCM sample: '40.3311' Tissue used: 'full endosperm' |
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| AT5G55560 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.14286 x 10-1 | 3 | 0 | 0 | 1 | 100.00% | 100.00% | 3 | 1 | TAIR8 |
Avg. embryo expression (dissected): '3.44275' Avg. embryo expression (LCM): '4.05642' |
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| AT5G55560 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.04891 x 10-1 | 17 | 3 | 85.00% | 20 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55560 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 14 | 4 | 77.78% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55560 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0278 | 23 | 1 | 95.83% | 24 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55550 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 9.28711 x 10-1 | 98 | 40 | 52 | 93 | 71.01% | 64.14% | 138 | 145 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.590579' Avg. expression score for this sample: '70.3504' Avg. expression score in LCM sample: '44.0203' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G55550 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.52704 x 10-1 | 47 | 18 | 11 | 28 | 72.31% | 71.79% | 65 | 39 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.590579' Avg. expression score for this sample: '50.8044' Avg. expression score in LCM sample: '44.0203' Tissue used: 'full endosperm' |
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| AT5G55550 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.14837 x 10-1 | 24 | 18 | 9 | 9 | 57.14% | 50.00% | 42 | 18 | TAIR8 |
Avg. embryo expression (dissected): '34.1176' Avg. embryo expression (LCM): '27.9052' |
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| AT5G55550 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.51195 x 10-1 | 18 | 6 | 75.00% | 24 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55550 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.90109 x 10-1 | 28 | 20 | 58.33% | 48 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55550 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.65537 x 10-1 | 27 | 6 | 81.82% | 33 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55540 | TRN1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 10 | 10 | 1 | 9 | 50.00% | 90.00% | 20 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.87931' Avg. expression score for this sample: '91.0494' Avg. expression score in LCM sample: '60.967' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G55540 | TRN1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.13426 x 10-1 | 22 | 8 | 12 | 27 | 73.33% | 69.23% | 30 | 39 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.87931' Avg. expression score for this sample: '110.963' Avg. expression score in LCM sample: '60.967' Tissue used: 'full endosperm' |
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| AT5G55540 | TRN1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.50034 x 10-1 | 16 | 10 | 2 | 3 | 61.54% | 60.00% | 26 | 5 | TAIR8 |
Avg. embryo expression (dissected): '110.127' Avg. embryo expression (LCM): '73.8696' |
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| AT5G55540 | TRN1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 2 | 66.67% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G55540 | TRN1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.7454 x 10-2 | 92 | 69 | 57.14% | 161 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G55540 | TRN1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.728 x 10-2 | 37 | 6 | 86.05% | 43 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G55530 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.30265 x 10-1 | 5 | 9 | 1 | 6 | 35.71% | 85.71% | 14 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.699184' Avg. expression score for this sample: '26.3253' Avg. expression score in LCM sample: '17.7551' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G55530 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.12238 x 10-1 | 11 | 4 | 4 | 22 | 73.33% | 84.62% | 15 | 26 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.699184' Avg. expression score for this sample: '27.7192' Avg. expression score in LCM sample: '17.7551' Tissue used: 'full endosperm' |
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| AT5G55530 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.3802 x 10-2 | 1 | 12 | 1 | 1 | 7.69% | 50.00% | 13 | 2 | TAIR8 |
Avg. embryo expression (dissected): '33.9616' Avg. embryo expression (LCM): '23.8487' |
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| AT5G55530 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 1 | 80.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55530 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 9.911 x 10-2 | 15 | 1 | 93.75% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55530 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 18 | 8 | 69.23% | 26 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55520 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.56666 x 10-1 | 27 | 26 | 17 | 34 | 50.94% | 66.67% | 53 | 51 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.213252' Avg. expression score for this sample: '118.176' Avg. expression score in LCM sample: '123.933' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G55520 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.47575 x 10-1 | 17 | 14 | 23 | 42 | 54.84% | 64.62% | 31 | 65 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.213252' Avg. expression score for this sample: '99.599' Avg. expression score in LCM sample: '123.933' Tissue used: 'full endosperm' |
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| AT5G55520 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.91765 x 10-1 | 66 | 76 | 17 | 15 | 46.48% | 46.88% | 142 | 32 | TAIR8 |
Avg. embryo expression (dissected): '306.602' Avg. embryo expression (LCM): '242.933' |
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| AT5G55520 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.56481 x 10-1 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55520 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.2318 x 10-2 | 18 | 4 | 81.82% | 22 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G55520 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.41293 x 10-1 | 8 | 8 | 50.00% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |