GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G345700	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.18606 x 10^-2	19	1	8	17	95.00%	68.00%	20	25	RefGen V2	χ2 p-value for B73 x Mo17: '.000057' χ2 p-value for Mo17 x B73: '.0718606' Biased in favor of strain: ''
GRMZM2G345700	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	MEG	9.4442 x 10^-3	25	0	1	18	100.00%	94.74%	25	19	RefGen V2	χ2 p-value for B73 x Mo17: '.000407' χ2 p-value for Mo17 x B73: '.0094442' Biased in favor of strain: ''
GRMZM2G345687	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	814	4	810	10	99.51%	1.22%	818	820	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G345687	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	398	3	280	7	99.25%	2.44%	401	287	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G345667	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.04571 x 10^-1	299	239	250	215	55.58%	46.24%	538	465	RefGen V2	χ2 p-value for B73 x Mo17: '.0096876' χ2 p-value for Mo17 x B73: '.104571' Biased in favor of strain: ''
GRMZM2G345667	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.42076 x 10^-2	122	39	79	83	75.78%	51.23%	161	162	RefGen V2	χ2 p-value for B73 x Mo17: '.0142076' χ2 p-value for Mo17 x B73: '.0000309' Biased in favor of strain: ''
GRMZM2G345582	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	0	1	0.00%	100.00%	3	1	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G345582	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	4	0	0	0.00%		4	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G345189	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	3	2		40.00%	0	5	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: ''
GRMZM2G345189	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G345055	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.160048 x 10^-1	198	159	133	139	55.46%	51.10%	357	272	RefGen V2	χ2 p-value for B73 x Mo17: '.0390083' χ2 p-value for Mo17 x B73: '.7160048' Biased in favor of strain: ''
GRMZM2G345055	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.17991 x 10^-2	270	91	118	180	74.79%	60.40%	361	298	RefGen V2	χ2 p-value for B73 x Mo17: '.0010568' χ2 p-value for Mo17 x B73: '.0217991' Biased in favor of strain: ''
GRMZM2G344993	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.61 x 10^-27	321	90	334	106	78.10%	24.09%	411	440	RefGen V2	χ2 p-value for B73 x Mo17: '4.46e-30' χ2 p-value for Mo17 x B73: '1.61e-27' Biased in favor of strain: 'B73'
GRMZM2G344993	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.839064 x 10^-1	42	18	40	33	70.00%	45.21%	60	73	RefGen V2	χ2 p-value for B73 x Mo17: '.5839064' χ2 p-value for Mo17 x B73: '.0001003' Biased in favor of strain: ''
GRMZM2G344967	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.319755 x 10^-1	215	150	128	144	58.90%	52.94%	365	272	RefGen V2	χ2 p-value for B73 x Mo17: '.0006683' χ2 p-value for Mo17 x B73: '.3319755' Biased in favor of strain: ''
GRMZM2G344967	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.603012 x 10^-1	72	49	56	99	59.50%	63.87%	121	155	RefGen V2	χ2 p-value for B73 x Mo17: '.0946425' χ2 p-value for Mo17 x B73: '.4603012' Biased in favor of strain: ''
GRMZM2G344857	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.47355 x 10^-2	54	37	61	34	59.34%	35.79%	91	95	RefGen V2	χ2 p-value for B73 x Mo17: '.0747355' χ2 p-value for Mo17 x B73: '.0056032' Biased in favor of strain: ''
GRMZM2G344857	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G344848	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.0492 x 10^-3	85	52	40	67	62.04%	62.62%	137	107	RefGen V2	χ2 p-value for B73 x Mo17: '.0048116' χ2 p-value for Mo17 x B73: '.0090492' Biased in favor of strain: ''
GRMZM2G344848	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.862125 x 10^-1	604	365	386	806	62.33%	67.62%	969	1192	RefGen V2	χ2 p-value for B73 x Mo17: '.0042056' χ2 p-value for Mo17 x B73: '.4862125' Biased in favor of strain: ''
GRMZM2G344634	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.45 x 10^-7	85	6	47	8	93.41%	14.55%	91	55	RefGen V2	χ2 p-value for B73 x Mo17: '1.22e-16' χ2 p-value for Mo17 x B73: '1.45e-07' Biased in favor of strain: 'B73'
GRMZM2G344634	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	866	69	596	59	92.62%	9.01%	935	655	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G344630	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.96 x 10^-5	69	15	76	35	82.14%	31.53%	84	111	RefGen V2	χ2 p-value for B73 x Mo17: '3.82e-09' χ2 p-value for Mo17 x B73: '.0000996' Biased in favor of strain: 'B73'
GRMZM2G344630	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.054693 x 10^-1	10	4	11	14	71.43%	56.00%	14	25	RefGen V2	χ2 p-value for B73 x Mo17: '.7054693' χ2 p-value for Mo17 x B73: '.2578989' Biased in favor of strain: ''
GRMZM2G344573	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G344573	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	0	6	0.00%	100.00%	3	6	RefGen V2	χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G344566	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	0	6	0.00%	100.00%	3	6	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G344566	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G344499	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.97 x 10^-9	0	36	0	38	0.00%	100.00%	36	38	RefGen V2	χ2 p-value for B73 x Mo17: '1.97e-09' χ2 p-value for Mo17 x B73: '7.07e-10' Biased in favor of strain: 'Mo17'
GRMZM2G344499	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.03 x 10^-7	1	35	0	54	2.78%	100.00%	36	54	RefGen V2	χ2 p-value for B73 x Mo17: '4.23e-16' χ2 p-value for Mo17 x B73: '2.03e-07' Biased in favor of strain: 'Mo17'
GRMZM2G344476	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	5	2	66.67%	28.57%	3	7	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.2568392' Biased in favor of strain: ''
GRMZM2G344476	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.02016 x 10^-1	13	10	10	11	56.52%	52.38%	23	21	RefGen V2	χ2 p-value for B73 x Mo17: '.302016' χ2 p-value for Mo17 x B73: '.1649147' Biased in favor of strain: ''
GRMZM2G344388	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.173105 x 10^-1	12	6	6	10	66.67%	62.50%	18	16	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G344388	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	2	1	4	33.33%	80.00%	3	5	RefGen V2	χ2 p-value for B73 x Mo17: '.2206667' χ2 p-value for Mo17 x B73: '.5270893' Biased in favor of strain: ''
GRMZM2G344376	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.46 x 10^-7	27	0	31	2	100.00%	6.06%	27	33	RefGen V2	χ2 p-value for B73 x Mo17: '2.03e-07' χ2 p-value for Mo17 x B73: '4.46e-07' Biased in favor of strain: 'B73'
GRMZM2G344376	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.683815 x 10^-1	9	9	9	11	50.00%	55.00%	18	20	RefGen V2	χ2 p-value for B73 x Mo17: '.1336079' χ2 p-value for Mo17 x B73: '.2683815' Biased in favor of strain: ''
GRMZM2G344323	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	2	0	100.00%	0.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G344323	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	2	0	100.00%	0.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: ''
GRMZM2G344279	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.047575 x 10^-1	24	14	14	57	63.16%	80.28%	38	71	RefGen V2	χ2 p-value for B73 x Mo17: '.1047575' χ2 p-value for Mo17 x B73: '3.34e-07' Biased in favor of strain: ''
GRMZM2G344279	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.892678 x 10^-1	6	16	10	18	27.27%	64.29%	22	28	RefGen V2	χ2 p-value for B73 x Mo17: '.0000887' χ2 p-value for Mo17 x B73: '.7892678' Biased in favor of strain: ''
GRMZM2G344212	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.590767 x 10^-1	87	49	53	42	63.97%	44.21%	136	95	RefGen V2	χ2 p-value for B73 x Mo17: '.0011201' χ2 p-value for Mo17 x B73: '.2590767' Biased in favor of strain: ''
GRMZM2G344212	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.003547 x 10^-1	46	14	39	31	76.67%	44.29%	60	70	RefGen V2	χ2 p-value for B73 x Mo17: '.1003547' χ2 p-value for Mo17 x B73: '.0000712' Biased in favor of strain: ''
GRMZM2G344205	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.78 x 10^-9	358	112	303	175	76.17%	36.61%	470	478	RefGen V2	χ2 p-value for B73 x Mo17: '7.66e-30' χ2 p-value for Mo17 x B73: '4.78e-09' Biased in favor of strain: 'B73'
GRMZM2G344205	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1708	311	777	545	84.60%	41.23%	2019	1322	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G344163	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	4	1	6	50.00%	85.71%	8	7	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: ''
GRMZM2G344163	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	2	0	1	60.00%	100.00%	5	1	RefGen V2	χ2 p-value for B73 x Mo17: '.7518208' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G343972	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	MEG	7.36 x 10^-15	69	3	4	111	95.83%	96.52%	72	115	RefGen V2	χ2 p-value for B73 x Mo17: '7.36e-15' χ2 p-value for Mo17 x B73: '1.91e-23' Biased in favor of strain: ''
GRMZM2G343972	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	MEG	6.61 x 10^-13	113	2	1	414	98.26%	99.76%	115	415	RefGen V2	χ2 p-value for B73 x Mo17: '6.61e-13' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G343916	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.75384 x 10^-1	483	344	327	309	58.40%	48.58%	827	636	RefGen V2	χ2 p-value for B73 x Mo17: '1.34e-06' χ2 p-value for Mo17 x B73: '.475384' Biased in favor of strain: ''
GRMZM2G343916	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.293808 x 10^-1	768	369	442	679	67.55%	60.57%	1137	1121	RefGen V2	χ2 p-value for B73 x Mo17: '.5293808' χ2 p-value for Mo17 x B73: '.0000149' Biased in favor of strain: ''
GRMZM2G343854	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.736 x 10^-4	99	22	58	24	81.82%	29.27%	121	82	RefGen V2	χ2 p-value for B73 x Mo17: '2.56e-12' χ2 p-value for Mo17 x B73: '.0001736' Biased in favor of strain: 'B73'
GRMZM2G343854	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	0	0	66.67%		3	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G343828	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	2		100.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G343828	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	4		100.00%	0	4	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G343769	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	375	39	460	59	90.58%	11.37%	414	519	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G343769	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		10	0	1	7	100.00%	87.50%	10	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '.2112996' Biased in favor of strain: ''
GRMZM2G343688	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.155825 x 10^-1	44	45	40	36	49.44%	47.37%	89	76	RefGen V2	χ2 p-value for B73 x Mo17: '.9155825' χ2 p-value for Mo17 x B73: '.6463552' Biased in favor of strain: ''
GRMZM2G343688	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.43072 x 10^-2	60	15	39	37	80.00%	48.68%	75	76	RefGen V2	χ2 p-value for B73 x Mo17: '.0143072' χ2 p-value for Mo17 x B73: '.0008825' Biased in favor of strain: ''
GRMZM2G343588	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	1	100.00%	100.00%	2	1	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G343588	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	0		0.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G343563	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	0	0	0.00%		3	0	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G343563	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G343445	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.403687 x 10^-1	28	18	26	9	60.87%	25.71%	46	35	RefGen V2	χ2 p-value for B73 x Mo17: '.1403687' χ2 p-value for Mo17 x B73: '.0040592' Biased in favor of strain: ''
GRMZM2G343445	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.518449 x 10^-1	14	6	22	7	70.00%	24.14%	20	29	RefGen V2	χ2 p-value for B73 x Mo17: '.7518449' χ2 p-value for Mo17 x B73: '1.18e-06' Biased in favor of strain: ''
GRMZM2G343428	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	0	2	0.00%	100.00%	3	2	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G343428	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G343236	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.13 x 10^-11	54	0	42	0	100.00%	0.00%	54	42	RefGen V2	χ2 p-value for B73 x Mo17: '2.00e-13' χ2 p-value for Mo17 x B73: '9.13e-11' Biased in favor of strain: 'B73'
GRMZM2G343236	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	2	0		0.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G343218	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	13	13	16	13	50.00%	44.83%	26	29	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.5774686' Biased in favor of strain: ''
GRMZM2G343218	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.338641 x 10^-1	29	11	11	54	72.50%	83.08%	40	65	RefGen V2	χ2 p-value for B73 x Mo17: '.4338641' χ2 p-value for Mo17 x B73: '.005007' Biased in favor of strain: ''
GRMZM2G343157	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.1236 x 10^-3	23	47	7	25	32.86%	78.12%	70	32	RefGen V2	χ2 p-value for B73 x Mo17: '.0041236' χ2 p-value for Mo17 x B73: '.0014627' Biased in favor of strain: 'Mo17'
GRMZM2G343157	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.70999 x 10^-2	13	1	2	14	92.86%	87.50%	14	16	RefGen V2	χ2 p-value for B73 x Mo17: '.0376363' χ2 p-value for Mo17 x B73: '.0770999' Biased in favor of strain: ''
GRMZM2G343149	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	4	0	7	0.00%	100.00%	4	7	RefGen V2	χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: ''
GRMZM2G343149	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	6	3	10	14.29%	76.92%	7	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0032832' χ2 p-value for Mo17 x B73: '.4327677' Biased in favor of strain: ''
GRMZM2G343139	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.1 x 10^-14	148	23	154	45	86.55%	22.61%	171	199	RefGen V2	χ2 p-value for B73 x Mo17: '1.19e-21' χ2 p-value for Mo17 x B73: '1.10e-14' Biased in favor of strain: 'B73'
GRMZM2G343139	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.94215 x 10^-2	394	132	157	371	74.90%	70.27%	526	528	RefGen V2	χ2 p-value for B73 x Mo17: '.0000612' χ2 p-value for Mo17 x B73: '.0794215' Biased in favor of strain: ''
GRMZM2G343080	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.92674 x 10^-1	283	157	139	122	64.32%	46.74%	440	261	RefGen V2	χ2 p-value for B73 x Mo17: '1.89e-09' χ2 p-value for Mo17 x B73: '.292674' Biased in favor of strain: ''
GRMZM2G343080	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.51 x 10^-5	185	46	92	79	80.09%	46.20%	231	171	RefGen V2	χ2 p-value for B73 x Mo17: '.0000151' χ2 p-value for Mo17 x B73: '1.36e-08' Biased in favor of strain: 'B73'
GRMZM2G343048	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.457786 x 10^-1	96	64	87	75	60.00%	46.30%	160	162	RefGen V2	χ2 p-value for B73 x Mo17: '.011412' χ2 p-value for Mo17 x B73: '.3457786' Biased in favor of strain: ''
GRMZM2G343048	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	2.7871 x 10^-3	49	45	44	17	52.13%	27.87%	94	61	RefGen V2	χ2 p-value for B73 x Mo17: '.0027871' χ2 p-value for Mo17 x B73: '1.29e-10' Biased in favor of strain: ''
GRMZM2G343024	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.290879 x 10^-1	256	203	242	221	55.77%	47.73%	459	463	RefGen V2	χ2 p-value for B73 x Mo17: '.0133674' χ2 p-value for Mo17 x B73: '.3290879' Biased in favor of strain: ''
GRMZM2G343024	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.628282 x 10^-1	280	112	165	296	71.43%	64.21%	392	461	RefGen V2	χ2 p-value for B73 x Mo17: '.0455097' χ2 p-value for Mo17 x B73: '.2628282' Biased in favor of strain: ''
GRMZM2G342907	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.47 x 10^-5	5	31	4	166	13.89%	97.65%	36	170	RefGen V2	χ2 p-value for B73 x Mo17: '.0000147' χ2 p-value for Mo17 x B73: '1.92e-35' Biased in favor of strain: 'Mo17'
GRMZM2G342907	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	6	0	3	0.00%	100.00%	6	3	RefGen V2	χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: ''
GRMZM2G342856	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		10	4	7	2	71.43%	22.22%	14	9	RefGen V2	χ2 p-value for B73 x Mo17: '.1088094' χ2 p-value for Mo17 x B73: '.0955807' Biased in favor of strain: ''
GRMZM2G342856	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	7	0	50.00%	0.00%	2	7	RefGen V2	χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: ''
GRMZM2G342821	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.52 x 10^-6	42	8	38	5	84.00%	11.63%	50	43	RefGen V2	χ2 p-value for B73 x Mo17: '1.52e-06' χ2 p-value for Mo17 x B73: '4.84e-07' Biased in favor of strain: 'B73'
GRMZM2G342821	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	0	0.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G342807	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.26 x 10^-28	175	20	330	53	89.74%	13.84%	195	383	RefGen V2	χ2 p-value for B73 x Mo17: '1.26e-28' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G342807	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		20	0	8	0	100.00%	0.00%	20	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0015655' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: ''
GRMZM2G342738	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.66 x 10^-4	83	43	95	28	65.87%	22.76%	126	123	RefGen V2	χ2 p-value for B73 x Mo17: '.000366' χ2 p-value for Mo17 x B73: '1.53e-09' Biased in favor of strain: 'B73'
GRMZM2G342738	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.635524 x 10^-1	12	1	5	5	92.31%	50.00%	13	10	RefGen V2	χ2 p-value for B73 x Mo17: '.0498614' χ2 p-value for Mo17 x B73: '.2635524' Biased in favor of strain: ''
GRMZM2G342693	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.68 x 10^-12	2	54	1	61	3.57%	98.39%	56	62	RefGen V2	χ2 p-value for B73 x Mo17: '3.68e-12' χ2 p-value for Mo17 x B73: '2.54e-14' Biased in favor of strain: 'Mo17'
GRMZM2G342693	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	47	308	44	568	13.24%	92.81%	355	612	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17'
GRMZM2G342687	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	3	1	100.00%	25.00%	3	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G342687	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		13	2	8	0	86.67%	0.00%	15	8	RefGen V2	χ2 p-value for B73 x Mo17: '.1003509' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: ''
GRMZM2G342685	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.990752 x 10^-1	85	65	41	49	56.67%	54.44%	150	90	RefGen V2	χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.3990752' Biased in favor of strain: ''
GRMZM2G342685	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	1.2444 x 10^-3	826	496	382	264	62.48%	40.87%	1322	646	RefGen V2	χ2 p-value for B73 x Mo17: '.0012444' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G342655	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	1	100.00%	100.00%	1	1	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G342655	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.82783 x 10^-1	6	9	8	15	40.00%	65.22%	15	23	RefGen V2	χ2 p-value for B73 x Mo17: '.0284579' χ2 p-value for Mo17 x B73: '.882783' Biased in favor of strain: ''

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