GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM5G871336	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.09 x 10^-11	260	123	318	170	67.89%	34.84%	383	488	RefGen V2	χ2 p-value for B73 x Mo17: '2.55e-12' χ2 p-value for Mo17 x B73: '2.09e-11' Biased in favor of strain: 'B73'
GRMZM5G871336	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.85313 x 10^-2	176	109	46	135	61.75%	74.59%	285	181	RefGen V2	χ2 p-value for B73 x Mo17: '.0785313' χ2 p-value for Mo17 x B73: '.0238194' Biased in favor of strain: ''
GRMZM5G871297	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.716705 x 10^-1	100	90	97	93	52.63%	48.95%	190	190	RefGen V2	χ2 p-value for B73 x Mo17: '.4681599' χ2 p-value for Mo17 x B73: '.7716705' Biased in favor of strain: ''
GRMZM5G871297	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.060895 x 10^-1	111	74	85	143	60.00%	62.72%	185	228	RefGen V2	χ2 p-value for B73 x Mo17: '.0544036' χ2 p-value for Mo17 x B73: '.2060895' Biased in favor of strain: ''
GRMZM5G871275	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	3	4	0	25.00%	0.00%	4	4	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM5G871275	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	1	1	0.00%	50.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: ''
GRMZM5G871154	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.25 x 10^-14	56	0	78	0	100.00%	0.00%	56	78	RefGen V2	χ2 p-value for B73 x Mo17: '7.25e-14' χ2 p-value for Mo17 x B73: '1.03e-18' Biased in favor of strain: 'B73'
GRMZM5G871154	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		16	0	0	0	100.00%		16	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G871143	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.380107 x 10^-1	418	462	334	510	47.50%	60.43%	880	844	RefGen V2	χ2 p-value for B73 x Mo17: '.1380107' χ2 p-value for Mo17 x B73: '1.38e-09' Biased in favor of strain: ''
GRMZM5G871143	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.486343 x 10^-1	732	268	370	674	73.20%	64.56%	1000	1044	RefGen V2	χ2 p-value for B73 x Mo17: '.0000117' χ2 p-value for Mo17 x B73: '.1486343' Biased in favor of strain: ''
GRMZM5G871126	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.107708 x 10^-1	147	104	102	117	58.57%	53.42%	251	219	RefGen V2	χ2 p-value for B73 x Mo17: '.0066449' χ2 p-value for Mo17 x B73: '.3107708' Biased in favor of strain: ''
GRMZM5G871126	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.118816 x 10^-1	86	46	89	110	65.15%	55.28%	132	199	RefGen V2	χ2 p-value for B73 x Mo17: '.7118816' χ2 p-value for Mo17 x B73: '.0006531' Biased in favor of strain: ''
GRMZM5G871093	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.82906 x 10^-2	51	72	54	79	41.46%	59.40%	123	133	RefGen V2	χ2 p-value for B73 x Mo17: '.0582906' χ2 p-value for Mo17 x B73: '.0301758' Biased in favor of strain: ''
GRMZM5G871093	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.23 x 10^-6	30	47	13	90	38.96%	87.38%	77	103	RefGen V2	χ2 p-value for B73 x Mo17: '2.51e-07' χ2 p-value for Mo17 x B73: '8.23e-06' Biased in favor of strain: 'Mo17'
GRMZM5G870959	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.013675 x 10^-1	91	54	66	76	62.76%	53.52%	145	142	RefGen V2	χ2 p-value for B73 x Mo17: '.0021214' χ2 p-value for Mo17 x B73: '.4013675' Biased in favor of strain: ''
GRMZM5G870959	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.29169 x 10^-1	50	30	85	150	62.50%	63.83%	80	235	RefGen V2	χ2 p-value for B73 x Mo17: '.429169' χ2 p-value for Mo17 x B73: '.3562512' Biased in favor of strain: ''
GRMZM5G870932	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.62 x 10^-7	263	162	146	272	61.88%	65.07%	425	418	RefGen V2	χ2 p-value for B73 x Mo17: '9.62e-07' χ2 p-value for Mo17 x B73: '7.14e-10' Biased in favor of strain: ''
GRMZM5G870932	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.35 x 10^-16	2747	1763	1274	3470	60.91%	73.15%	4510	4744	RefGen V2	χ2 p-value for B73 x Mo17: '2.35e-16' χ2 p-value for Mo17 x B73: '2.92e-21' Biased in favor of strain: 'Mo17'
GRMZM5G870752	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	6009	768	6439	974	88.67%	13.14%	6777	7413	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G870752	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	5877	436	2756	770	93.09%	21.84%	6313	3526	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G870629	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	87	87	110	92	50.00%	45.54%	174	202	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.2053429' Biased in favor of strain: ''
GRMZM5G870629	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	0	8	4	100.00%	33.33%	9	12	RefGen V2	χ2 p-value for B73 x Mo17: '.0338955' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM5G870592	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	3	10	20	25.00%	66.67%	4	30	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0678892' Biased in favor of strain: ''
GRMZM5G870592	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.547205 x 10^-1	41	68	32	58	37.61%	64.44%	109	90	RefGen V2	χ2 p-value for B73 x Mo17: '1.24e-10' χ2 p-value for Mo17 x B73: '.6547205' Biased in favor of strain: ''
GRMZM5G870572	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.987646 x 10^-1	165	71	96	79	69.92%	45.14%	236	175	RefGen V2	χ2 p-value for B73 x Mo17: '9.42e-10' χ2 p-value for Mo17 x B73: '.1987646' Biased in favor of strain: ''
GRMZM5G870572	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.963039 x 10^-1	184	80	93	157	69.70%	62.80%	264	250	RefGen V2	χ2 p-value for B73 x Mo17: '.2963039' χ2 p-value for Mo17 x B73: '.1946586' Biased in favor of strain: ''
GRMZM5G870446	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.444 x 10^-4	81	38	59	26	68.07%	30.59%	119	85	RefGen V2	χ2 p-value for B73 x Mo17: '.0000809' χ2 p-value for Mo17 x B73: '.0003444' Biased in favor of strain: 'B73'
GRMZM5G870446	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	4	4	0	63.64%	0.00%	11	4	RefGen V2	χ2 p-value for B73 x Mo17: '.8311576' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: ''
GRMZM5G870176	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.58 x 10^-9	527	346	484	318	60.37%	39.65%	873	802	RefGen V2	χ2 p-value for B73 x Mo17: '9.02e-10' χ2 p-value for Mo17 x B73: '4.58e-09' Biased in favor of strain: 'B73'
GRMZM5G870176	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.181943 x 10^-1	358	154	315	484	69.92%	60.58%	512	799	RefGen V2	χ2 p-value for B73 x Mo17: '.1181943' χ2 p-value for Mo17 x B73: '.0002599' Biased in favor of strain: ''
GRMZM5G870170	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	2	0	4	66.67%	100.00%	6	4	RefGen V2	χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM5G870170	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G870080	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.242 x 10^-4	92	50	122	65	64.79%	34.76%	142	187	RefGen V2	χ2 p-value for B73 x Mo17: '.0004242' χ2 p-value for Mo17 x B73: '.0000307' Biased in favor of strain: 'B73'
GRMZM5G870080	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.780535 x 10^-1	56	29	43	52	65.88%	54.74%	85	95	RefGen V2	χ2 p-value for B73 x Mo17: '.8780535' χ2 p-value for Mo17 x B73: '.0136395' Biased in favor of strain: ''
GRMZM5G870077	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.5273 x 10^-3	498	303	510	418	62.17%	45.04%	801	928	RefGen V2	χ2 p-value for B73 x Mo17: '5.58e-12' χ2 p-value for Mo17 x B73: '.0025273' Biased in favor of strain: 'B73'
GRMZM5G870077	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.33 x 10^-14	1271	414	638	825	75.43%	56.39%	1685	1463	RefGen V2	χ2 p-value for B73 x Mo17: '2.33e-14' χ2 p-value for Mo17 x B73: '7.58e-17' Biased in favor of strain: 'B73'
GRMZM5G869993	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.434868 x 10^-1	100	99	92	123	50.25%	57.21%	199	215	RefGen V2	χ2 p-value for B73 x Mo17: '.9434868' χ2 p-value for Mo17 x B73: '.0344997' Biased in favor of strain: ''
GRMZM5G869993	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.136933 x 10^-1	93	52	63	119	64.14%	65.38%	145	182	RefGen V2	χ2 p-value for B73 x Mo17: '.5182784' χ2 p-value for Mo17 x B73: '.7136933' Biased in favor of strain: ''
GRMZM5G869984	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	8	18	50.00%	69.23%	2	26	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0498602' Biased in favor of strain: ''
GRMZM5G869984	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	3	4		57.14%	0	7	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G869788	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.11 x 10^-13	983	525	722	466	65.19%	39.23%	1508	1188	RefGen V2	χ2 p-value for B73 x Mo17: '4.19e-32' χ2 p-value for Mo17 x B73: '1.11e-13' Biased in favor of strain: 'B73'
GRMZM5G869788	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.13 x 10^-11	170	19	324	35	89.95%	9.75%	189	359	RefGen V2	χ2 p-value for B73 x Mo17: '1.13e-11' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G869779	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.67 x 10^-8	120	258	104	200	31.75%	65.79%	378	304	RefGen V2	χ2 p-value for B73 x Mo17: '1.27e-12' χ2 p-value for Mo17 x B73: '3.67e-08' Biased in favor of strain: 'Mo17'
GRMZM5G869779	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.11 x 10^-5	97	137	65	234	41.45%	78.26%	234	299	RefGen V2	χ2 p-value for B73 x Mo17: '2.79e-16' χ2 p-value for Mo17 x B73: '.0000211' Biased in favor of strain: 'Mo17'
GRMZM5G869572	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	1	0	0.00%	0.00%	3	1	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM5G869572	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	1	0	100.00%	0.00%	1	1	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM5G869550	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.35 x 10^-24	140	7	119	5	95.24%	4.03%	147	124	RefGen V2	χ2 p-value for B73 x Mo17: '5.35e-28' χ2 p-value for Mo17 x B73: '1.35e-24' Biased in favor of strain: 'B73'
GRMZM5G869550	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.05 x 10^-6	80	5	33	19	94.12%	36.54%	85	52	RefGen V2	χ2 p-value for B73 x Mo17: '7.93e-08' χ2 p-value for Mo17 x B73: '4.05e-06' Biased in favor of strain: 'B73'
GRMZM5G869532	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	1	0.00%	100.00%	2	1	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM5G869532	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	2	0.00%	100.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM5G869482	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.32645 x 10^-2	9	3	6	14	75.00%	70.00%	12	20	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.0736383' Biased in favor of strain: ''
GRMZM5G869482	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	0	5	18	100.00%	78.26%	7	23	RefGen V2	χ2 p-value for B73 x Mo17: '.0613697' χ2 p-value for Mo17 x B73: '.238185' Biased in favor of strain: ''
GRMZM5G869469	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.07011 x 10^-2	44	28	37	23	61.11%	38.33%	72	60	RefGen V2	χ2 p-value for B73 x Mo17: '.0593464' χ2 p-value for Mo17 x B73: '.0707011' Biased in favor of strain: ''
GRMZM5G869469	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G869422	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.38578 x 10^-1	9	6	12	3	60.00%	20.00%	15	15	RefGen V2	χ2 p-value for B73 x Mo17: '.438578' χ2 p-value for Mo17 x B73: '.0201368' Biased in favor of strain: ''
GRMZM5G869422	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G869403	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.75 x 10^-24	205	468	146	437	30.46%	74.96%	673	583	RefGen V2	χ2 p-value for B73 x Mo17: '3.75e-24' χ2 p-value for Mo17 x B73: '1.89e-33' Biased in favor of strain: 'Mo17'
GRMZM5G869403	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.75441 x 10^-2	81	71	75	188	53.29%	71.48%	152	263	RefGen V2	χ2 p-value for B73 x Mo17: '.0004676' χ2 p-value for Mo17 x B73: '.0975441' Biased in favor of strain: ''
GRMZM5G869350	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.681599 x 10^-1	160	122	100	90	56.74%	47.37%	282	190	RefGen V2	χ2 p-value for B73 x Mo17: '.0236439' χ2 p-value for Mo17 x B73: '.4681599' Biased in favor of strain: ''
GRMZM5G869350	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.1365 x 10^-3	135	103	48	206	56.72%	81.10%	238	254	RefGen V2	χ2 p-value for B73 x Mo17: '.0011365' χ2 p-value for Mo17 x B73: '1.06e-06' Biased in favor of strain: 'Mo17'
GRMZM5G869299	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.720755 x 10^-1	471	444	502	377	51.48%	42.89%	915	879	RefGen V2	χ2 p-value for B73 x Mo17: '.3720755' χ2 p-value for Mo17 x B73: '.0000249' Biased in favor of strain: ''
GRMZM5G869299	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.728577 x 10^-1	32	5	20	31	86.49%	60.78%	37	51	RefGen V2	χ2 p-value for B73 x Mo17: '.0105449' χ2 p-value for Mo17 x B73: '.3728577' Biased in favor of strain: ''
GRMZM5G869196	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	1	1	0	83.33%	0.00%	6	1	RefGen V2	χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM5G869196	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.402912 x 10^-1	24	33	5	7	42.11%	58.33%	57	12	RefGen V2	χ2 p-value for B73 x Mo17: '.0000836' χ2 p-value for Mo17 x B73: '.5402912' Biased in favor of strain: ''
GRMZM5G869161	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	1	1	100.00%	50.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM5G869161	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	0	9	0	100.00%	0.00%	7	9	RefGen V2	χ2 p-value for B73 x Mo17: '.0613697' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: ''
GRMZM5G868917	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.73 x 10^-6	30	0	22	0	100.00%	0.00%	30	22	RefGen V2	χ2 p-value for B73 x Mo17: '4.32e-08' χ2 p-value for Mo17 x B73: '2.73e-06' Biased in favor of strain: 'B73'
GRMZM5G868917	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.35 x 10^-14	111	0	83	0	100.00%	0.00%	111	83	RefGen V2	χ2 p-value for B73 x Mo17: '9.35e-14' χ2 p-value for Mo17 x B73: '5.53e-38' Biased in favor of strain: 'B73'
GRMZM5G868908	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.64 x 10^-6	409	230	360	246	64.01%	40.59%	639	606	RefGen V2	χ2 p-value for B73 x Mo17: '1.43e-12' χ2 p-value for Mo17 x B73: '3.64e-06' Biased in favor of strain: 'B73'
GRMZM5G868908	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.371935 x 10^-1	563	345	361	655	62.00%	64.47%	908	1016	RefGen V2	χ2 p-value for B73 x Mo17: '.0028791' χ2 p-value for Mo17 x B73: '.1371935' Biased in favor of strain: ''
GRMZM5G868868	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.06 x 10^-5	191	45	112	59	80.93%	34.50%	236	171	RefGen V2	χ2 p-value for B73 x Mo17: '2.02e-21' χ2 p-value for Mo17 x B73: '.0000506' Biased in favor of strain: 'B73'
GRMZM5G868868	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.757 x 10^-4	133	34	135	127	79.64%	48.47%	167	262	RefGen V2	χ2 p-value for B73 x Mo17: '.0003757' χ2 p-value for Mo17 x B73: '4.18e-10' Biased in favor of strain: 'B73'
GRMZM5G868757	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.17815 x 10^-2	178	119	172	132	59.93%	43.42%	297	304	RefGen V2	χ2 p-value for B73 x Mo17: '.0006181' χ2 p-value for Mo17 x B73: '.0217815' Biased in favor of strain: 'B73'
GRMZM5G868757	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.544503 x 10^-1	74	22	58	96	77.08%	62.34%	96	154	RefGen V2	χ2 p-value for B73 x Mo17: '.0303858' χ2 p-value for Mo17 x B73: '.2544503' Biased in favor of strain: ''
GRMZM5G868730	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1078	420	1083	341	71.96%	23.95%	1498	1424	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G868730	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.679482 x 10^-1	25	8	25	5	75.76%	16.67%	33	30	RefGen V2	χ2 p-value for B73 x Mo17: '.2679482' χ2 p-value for Mo17 x B73: '6.27e-09' Biased in favor of strain: ''
GRMZM5G868679	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.652088 x 10^-1	21	10	17	13	67.74%	43.33%	31	30	RefGen V2	χ2 p-value for B73 x Mo17: '.0481935' χ2 p-value for Mo17 x B73: '.4652088' Biased in favor of strain: ''
GRMZM5G868679	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.580048 x 10^-1	17	12	18	15	58.62%	45.45%	29	33	RefGen V2	χ2 p-value for B73 x Mo17: '.3580048' χ2 p-value for Mo17 x B73: '.0097401' Biased in favor of strain: ''
GRMZM5G868664	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.3748 x 10^-3	43	20	33	15	68.25%	31.25%	63	48	RefGen V2	χ2 p-value for B73 x Mo17: '.0037588' χ2 p-value for Mo17 x B73: '.0093748' Biased in favor of strain: 'B73'
GRMZM5G868664	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.989608 x 10^-1	21	10	16	57	67.74%	78.08%	31	73	RefGen V2	χ2 p-value for B73 x Mo17: '.8989608' χ2 p-value for Mo17 x B73: '.0385447' Biased in favor of strain: ''
GRMZM5G868647	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.52638 x 10^-2	685	608	720	646	52.98%	47.29%	1293	1366	RefGen V2	χ2 p-value for B73 x Mo17: '.0322443' χ2 p-value for Mo17 x B73: '.0452638' Biased in favor of strain: 'B73'
GRMZM5G868647	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	0.0	167	578	782	431	22.42%	35.53%	745	1213	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM5G868471	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.206714 x 10^-1	13	3	15	9	81.25%	37.50%	16	24	RefGen V2	χ2 p-value for B73 x Mo17: '.0124193' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: ''
GRMZM5G868471	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	5	100.00%	100.00%	1	5	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.1138463' Biased in favor of strain: ''
GRMZM5G868381	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.929801 x 10^-1	6	8	3	10	42.86%	76.92%	14	13	RefGen V2	χ2 p-value for B73 x Mo17: '.5929801' χ2 p-value for Mo17 x B73: '.0522036' Biased in favor of strain: ''
GRMZM5G868381	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	0	3	100.00%	100.00%	4	3	RefGen V2	χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: ''
GRMZM5G868355	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.01739 x 10^-2	210	170	193	127	55.26%	39.69%	380	320	RefGen V2	χ2 p-value for B73 x Mo17: '.0401739' χ2 p-value for Mo17 x B73: '.0002247' Biased in favor of strain: 'B73'
GRMZM5G868355	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.244941 x 10^-1	144	62	55	92	69.90%	62.59%	206	147	RefGen V2	χ2 p-value for B73 x Mo17: '.3244941' χ2 p-value for Mo17 x B73: '.2938184' Biased in favor of strain: ''
GRMZM5G868354	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.3652 x 10^-3	883	764	754	595	53.61%	44.11%	1647	1349	RefGen V2	χ2 p-value for B73 x Mo17: '.0033652' χ2 p-value for Mo17 x B73: '.000015' Biased in favor of strain: 'B73'
GRMZM5G868354	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.062676 x 10^-1	2056	1002	934	1955	67.23%	67.67%	3058	2889	RefGen V2	χ2 p-value for B73 x Mo17: '.5062676' χ2 p-value for Mo17 x B73: '.2524014' Biased in favor of strain: ''
GRMZM5G868273	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.62 x 10^-23	794	316	714	383	71.53%	34.91%	1110	1097	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.62e-23' Biased in favor of strain: 'B73'
GRMZM5G868273	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	727	124	422	353	85.43%	45.55%	851	775	RefGen V2	χ2 p-value for B73 x Mo17: '3.64e-31' χ2 p-value for Mo17 x B73: '1.07e-35' Biased in favor of strain: 'B73'
GRMZM5G868222	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.70562 x 10^-2	56	36	53	23	60.87%	30.26%	92	76	RefGen V2	χ2 p-value for B73 x Mo17: '.0370562' χ2 p-value for Mo17 x B73: '.0005791' Biased in favor of strain: 'B73'
GRMZM5G868222	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.30044 x 10^-2	4	7	31	12	36.36%	27.91%	11	43	RefGen V2	χ2 p-value for B73 x Mo17: '.0330044' χ2 p-value for Mo17 x B73: '6.98e-08' Biased in favor of strain: ''
GRMZM5G868168	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.7329 x 10^-1	68	58	43	47	53.97%	52.22%	126	90	RefGen V2	χ2 p-value for B73 x Mo17: '.3729985' χ2 p-value for Mo17 x B73: '.67329' Biased in favor of strain: ''
GRMZM5G868168	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.70998 x 10^-2	136	37	58	86	78.61%	59.72%	173	144	RefGen V2	χ2 p-value for B73 x Mo17: '.0008589' χ2 p-value for Mo17 x B73: '.0770998' Biased in favor of strain: ''
GRMZM5G868062	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.043364 x 10^-1	122	128	79	112	48.80%	58.64%	250	191	RefGen V2	χ2 p-value for B73 x Mo17: '.7043364' χ2 p-value for Mo17 x B73: '.0169497' Biased in favor of strain: ''
GRMZM5G868062	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.3432 x 10^-3	38	62	25	94	38.00%	78.99%	100	119	RefGen V2	χ2 p-value for B73 x Mo17: '1.19e-09' χ2 p-value for Mo17 x B73: '.0043432' Biased in favor of strain: 'Mo17'
GRMZM5G868047	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.803243 x 10^-1	63	80	79	66	44.06%	45.52%	143	145	RefGen V2	χ2 p-value for B73 x Mo17: '.1551391' χ2 p-value for Mo17 x B73: '.2803243' Biased in favor of strain: ''
GRMZM5G868047	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.10945 x 10^-2	178	120	48	201	59.73%	80.72%	298	249	RefGen V2	χ2 p-value for B73 x Mo17: '.0110945' χ2 p-value for Mo17 x B73: '2.54e-06' Biased in favor of strain: ''

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