Displaying data sets 79601 - 79700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G28930 AIG2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28930 AIG2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28925 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28925 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28925 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G28925 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G28925 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28925 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G28920 HB34 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.48416 x 10-1 25 49 21 22 33.78% 51.16% 74 43 TAIR8 Avg. embryo expression (dissected): '301.231'
Avg. embryo expression (LCM): '283.409'
AT3G28920 HB34 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.56595 x 10-1 23 13 63.89% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28920 HB34 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.61115 x 10-1 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28920 HB34 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.25003 x 10-1 11 4 73.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28920 HB34 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.9387 x 10-2 40 42 24 47 48.78% 66.20% 82 71 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.275982'
Avg. expression score for this sample: '126.216'
Avg. expression score in LCM sample: '13.7719'
Tissue used: 'full endosperm'
AT3G28920 HB34 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.86064 x 10-1 27 21 14 49 56.25% 77.78% 48 63 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.275982'
Avg. expression score for this sample: '170.445'
Avg. expression score in LCM sample: '13.7719'
Tissue used: 'pure endosperm, no chalazal'
AT3G28918 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G28918 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G28918 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28918 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G28918 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28918 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28917 MIF2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 433 0 100.00% 433 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28917 MIF2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 76 0 100.00% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28917 MIF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.3 x 10-6 44 0 0 9 100.00% 100.00% 44 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '29.3265'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G28917 MIF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 209 0 0 109 100.00% 100.00% 209 109 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '115.028'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G28917 MIF2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.705519'
Avg. embryo expression (LCM): '0'
AT3G28917 MIF2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 30 0 100.00% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28910 MYB30 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.3735 x 10-2 36 0 100.00% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28910 MYB30 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.58647 x 10-1 40 29 7 10 57.97% 58.82% 69 17 TAIR8 Avg. embryo expression (dissected): '224.315'
Avg. embryo expression (LCM): '164.392'
AT3G28910 MYB30 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.123 x 10-2 14 2 0 8 87.50% 100.00% 16 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.4e-06'
Avg. expression score for this sample: '38.4219'
Avg. expression score in LCM sample: '4.62984'
Tissue used: 'pure endosperm, no chalazal'
AT3G28910 MYB30 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.366 x 10-3 63 0 100.00% 63 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28910 MYB30 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.096 x 10-3 167 3 98.24% 170 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28910 MYB30 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.8 x 10-5 50 4 9 56 92.59% 86.15% 54 65 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.4e-06'
Avg. expression score for this sample: '126.108'
Avg. expression score in LCM sample: '4.62984'
Tissue used: 'full endosperm'
AT3G28900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.70345 x 10-1 17 16 12 17 51.52% 58.62% 33 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.042289'
Avg. expression score for this sample: '149.304'
Avg. expression score in LCM sample: '28.4993'
Tissue used: 'full endosperm'
AT3G28900 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.19161 x 10-1 60 69 10 14 46.51% 58.33% 129 24 TAIR8 Avg. embryo expression (dissected): '296.204'
Avg. embryo expression (LCM): '673.579'
AT3G28900 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.95 x 10-4 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28900 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8 x 10-7 39 2 95.12% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28900 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.6831 x 10-2 14 3 82.35% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.16221 x 10-1 25 21 18 21 54.35% 53.85% 46 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.042289'
Avg. expression score for this sample: '104.728'
Avg. expression score in LCM sample: '28.4993'
Tissue used: 'pure endosperm, no chalazal'
AT3G28899 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.09172'
Avg. expression score in LCM sample: '23.4579'
Tissue used: 'pure endosperm, no chalazal'
AT3G28899 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28899 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28899 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.5128'
Avg. expression score in LCM sample: '23.4579'
Tissue used: 'full endosperm'
AT3G28899 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28899 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G28890 RLP43 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.126723'
Avg. embryo expression (LCM): '1.0926'
AT3G28890 RLP43 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28890 RLP43 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.0946 x 10-2 230 1 99.57% 231 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28890 RLP43 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.012 x 10-3 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28890 RLP43 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.8404 x 10-2 16 0 0 1 100.00% 100.00% 16 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.006016'
Avg. expression score for this sample: '4.70075'
Avg. expression score in LCM sample: '1.92543'
Tissue used: 'pure endosperm, no chalazal'
AT3G28890 RLP43 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.27386 x 10-1 16 2 0 2 88.89% 100.00% 18 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.006016'
Avg. expression score for this sample: '3.45074'
Avg. expression score in LCM sample: '1.92543'
Tissue used: 'full endosperm'
AT3G28880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.84773 x 10-1 28 2 5 1 93.33% 16.67% 30 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.311128'
Avg. expression score for this sample: '6.65268'
Avg. expression score in LCM sample: '1.17583'
Tissue used: 'full endosperm'
AT3G28880 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28880 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.70916 x 10-1 10 1 14 0 90.91% 0.00% 11 14 TAIR8 Avg. embryo expression (dissected): '10.55'
Avg. embryo expression (LCM): '8.57751'
AT3G28880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 16 0 7 1 100.00% 12.50% 16 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.311128'
Avg. expression score for this sample: '6.84309'
Avg. expression score in LCM sample: '1.17583'
Tissue used: 'pure endosperm, no chalazal'
AT3G28880 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0625 x 10-1 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28880 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.15 x 10-4 47 0 100.00% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28870 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28870 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G28870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.628895'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G28870 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G28870 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28860 ABCB19 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.0887 x 10-2 153 56 73.21% 209 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28860 ABCB19 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.95463 x 10-1 890 773 237 206 53.52% 46.50% 1663 443 TAIR8 Avg. embryo expression (dissected): '422.922'
Avg. embryo expression (LCM): '299.522'
AT3G28860 ABCB19 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.70929 x 10-1 527 285 278 606 64.90% 68.55% 812 884 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.964892'
Avg. expression score for this sample: '231.785'
Avg. expression score in LCM sample: '467.629'
Tissue used: 'pure endosperm, no chalazal'
AT3G28860 ABCB19 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.5 x 10-20 499 91 84.58% 590 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28860 ABCB19 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.7 x 10-16 720 181 79.91% 901 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28860 ABCB19 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 579 398 585 1387 59.26% 70.33% 977 1972 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.964892'
Avg. expression score for this sample: '209.86'
Avg. expression score in LCM sample: '467.629'
Tissue used: 'full endosperm'
AT3G28857 PRE5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G28857 PRE5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.393923'
Avg. embryo expression (LCM): '0'
AT3G28857 PRE5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28857 PRE5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28857 PRE5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28857 PRE5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G28850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.82043 x 10-1 4 1 0 5 80.00% 100.00% 5 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000758'
Avg. expression score for this sample: '45.985'
Avg. expression score in LCM sample: '21.2385'
Tissue used: 'pure endosperm, no chalazal'
AT3G28850 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 56 10 84.85% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28850 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.7126 x 10-1 162 30 84.38% 192 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.57 x 10-3 52 5 11 38 91.23% 77.55% 57 49 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000758'
Avg. expression score for this sample: '91.5109'
Avg. expression score in LCM sample: '21.2385'
Tissue used: 'full endosperm'
AT3G28850 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28850 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 3 0 2 40.00% 100.00% 5 2 TAIR8 Avg. embryo expression (dissected): '50.1167'
Avg. embryo expression (LCM): '24.2004'
AT3G28840 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.514825'
Avg. embryo expression (LCM): '0'
AT3G28840 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28840 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28840 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G28840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G28830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 8 0 3 0 100.00% 0.00% 8 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003369'
Avg. expression score for this sample: '7.44661'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G28830 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.89899 x 10-1 0 4 0.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28830 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 2 1 33.33% 0 3 TAIR8 Avg. embryo expression (dissected): '10.8605'
Avg. embryo expression (LCM): '0'
AT3G28830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.97 x 10-4 9 0 31 2 100.00% 6.06% 9 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003369'
Avg. expression score for this sample: '32.299'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G28830 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.7037 x 10-1 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28830 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0922 x 10-1 0 4 0.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.979 x 10-3 13 0 100.00% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.7497 x 10-2 0 2 1 23 0.00% 95.83% 2 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.270062'
Avg. expression score for this sample: '22.8137'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G28820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.6 x 10-5 0 17 0 0 0.00% 17 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.270062'
Avg. expression score for this sample: '6.73011'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G28820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 0 3 0.00% 100.00% 1 3 TAIR8 Avg. embryo expression (dissected): '4.77438'
Avg. embryo expression (LCM): '0'
AT3G28820 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28810 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G28810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 4.28571 x 10-1 0 0 4 0 0.00% 0 4 TAIR8 Avg. embryo expression (dissected): '4.57411'
Avg. embryo expression (LCM): '.96701'