Displaying data sets 77001 - 77100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G45140 LOX2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.00634'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G45140 LOX2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 3 0 0 25.00% 4 0 TAIR8 Avg. embryo expression (dissected): '9.29867'
Avg. embryo expression (LCM): '7.5477'
AT3G45140 LOX2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45140 LOX2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 99 0 100.00% 99 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45130 LAS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 7 3 70.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45130 LAS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.89536 x 10-1 21 15 58.33% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45130 LAS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45130 LAS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.6447 x 10-2 58 56 34 63 50.88% 64.95% 114 97 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.42841'
Avg. expression score for this sample: '195.498'
Avg. expression score in LCM sample: '233.653'
Tissue used: 'full endosperm'
AT3G45130 LAS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 2 3 2 71.43% 40.00% 7 5 TAIR8 Avg. embryo expression (dissected): '16.7504'
Avg. embryo expression (LCM): '3.46617'
AT3G45130 LAS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.32627 x 10-1 62 31 33 88 66.67% 72.73% 93 121 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.42841'
Avg. expression score for this sample: '224.25'
Avg. expression score in LCM sample: '233.653'
Tissue used: 'pure endosperm, no chalazal'
AT3G45110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G45110 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G45110 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45110 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.999602'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G45110 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45100 SETH2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0599 x 10-1 82 63 56.55% 145 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45100 SETH2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.10196 x 10-1 88 34 57 69 72.13% 54.76% 122 126 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.584318'
Avg. expression score for this sample: '60.4413'
Avg. expression score in LCM sample: '44.4906'
Tissue used: 'full endosperm'
AT3G45100 SETH2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.23884 x 10-1 54 29 3 0 65.06% 0.00% 83 3 TAIR8 Avg. embryo expression (dissected): '72.197'
Avg. embryo expression (LCM): '73.2667'
AT3G45100 SETH2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 53 23 15 23 69.74% 60.53% 76 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.584318'
Avg. expression score for this sample: '58.1592'
Avg. expression score in LCM sample: '44.4906'
Tissue used: 'pure endosperm, no chalazal'
AT3G45100 SETH2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.3 x 10-16 112 2 98.25% 114 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45100 SETH2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.69432 x 10-1 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45093 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45093 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45093 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '127.568'
Avg. expression score in LCM sample: '12.1993'
Tissue used: 'full endosperm'
AT3G45093 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45093 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '163.097'
Avg. expression score in LCM sample: '12.1993'
Tissue used: 'pure endosperm, no chalazal'
AT3G45093 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4.8186'
Avg. embryo expression (LCM): '0'
AT3G45090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.10123 x 10-1 116 50 46 16 69.88% 25.81% 166 62 TAIR8 Avg. embryo expression (dissected): '407.068'
Avg. embryo expression (LCM): '256.434'
AT3G45090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.2 x 10-12 83 50 167 63 62.41% 27.39% 133 230 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.7e-11'
Avg. expression score for this sample: '369.636'
Avg. expression score in LCM sample: '197.173'
Tissue used: 'pure endosperm, no chalazal'
AT3G45090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.2 x 10-20 252 62 80.25% 314 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.38544 x 10-1 13 11 54.17% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.0438 x 10-2 347 260 57.17% 607 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.4898 x 10-2 149 44 169 161 77.20% 48.79% 193 330 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.7e-11'
Avg. expression score for this sample: '336.566'
Avg. expression score in LCM sample: '197.173'
Tissue used: 'full endosperm'
AT3G45080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.8 x 10-7 6 0 1 61 100.00% 98.39% 6 62 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.9e-07'
Avg. expression score for this sample: '59.448'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G45080 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.24419 x 10-1 99 0 100.00% 99 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.44444 x 10-1 4 0 0 1 100.00% 100.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.9e-07'
Avg. expression score for this sample: '10.3837'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G45080 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.98371'
Avg. embryo expression (LCM): '0'
AT3G45080 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45080 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45070 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45070 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.1315 x 10-1 36 1 97.30% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.0 x 10-30 13 0 0 246 100.00% 100.00% 13 246 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.8e-34'
Avg. expression score for this sample: '83.9916'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G45070 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 494 0 100.00% 494 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45070 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '1.66904'
Avg. embryo expression (LCM): '0'
AT3G45070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.25 x 10-4 7 0 0 24 100.00% 100.00% 7 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.8e-34'
Avg. expression score for this sample: '21.9247'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G45060 NRT2.6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '21.155'
Avg. expression score in LCM sample: '4.80622'
Tissue used: 'pure endosperm, no chalazal'
AT3G45060 NRT2.6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '19.8555'
Avg. embryo expression (LCM): '10.9636'
AT3G45060 NRT2.6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '22.8387'
Avg. expression score in LCM sample: '4.80622'
Tissue used: 'full endosperm'
AT3G45060 NRT2.6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45060 NRT2.6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45060 NRT2.6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45050 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45050 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '9.08412'
Avg. embryo expression (LCM): '10.1348'
AT3G45050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.76501'
Avg. expression score in LCM sample: '5.08548'
Tissue used: 'pure endosperm, no chalazal'
AT3G45050 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45050 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 2 1 33.33% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.32769'
Avg. expression score in LCM sample: '5.08548'
Tissue used: 'full endosperm'
AT3G45040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 15 4 7 8 78.95% 53.33% 19 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.743836'
Avg. expression score for this sample: '372.473'
Avg. expression score in LCM sample: '156.562'
Tissue used: 'full endosperm'
AT3G45040 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.4834 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45040 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.686 x 10-3 19 1 95.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45040 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.20461 x 10-1 9 2 81.82% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.64087 x 10-1 14 7 11 14 66.67% 56.00% 21 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.743836'
Avg. expression score for this sample: '906.635'
Avg. expression score in LCM sample: '156.562'
Tissue used: 'pure endosperm, no chalazal'
AT3G45040 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 2 4 4 0.00% 50.00% 2 8 TAIR8 Avg. embryo expression (dissected): '263.272'
Avg. embryo expression (LCM): '86.516'
AT3G45030 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.45096 x 10-1 105 122 26 19 46.26% 42.22% 227 45 TAIR8 Avg. embryo expression (dissected): '709.324'
Avg. embryo expression (LCM): '509.439'
AT3G45030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.99003 x 10-1 61 24 20 36 71.76% 64.29% 85 56 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.860485'
Avg. expression score for this sample: '285.218'
Avg. expression score in LCM sample: '61.1433'
Tissue used: 'pure endosperm, no chalazal'
AT3G45030 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.4277 x 10-2 48 13 78.69% 61 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45030 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.37089 x 10-1 19 10 65.52% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 46 15 36 55 75.41% 60.44% 61 91 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.860485'
Avg. expression score for this sample: '146.886'
Avg. expression score in LCM sample: '61.1433'
Tissue used: 'full endosperm'
AT3G45030 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.041 x 10-3 89 17 83.96% 106 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45020 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.74067 x 10-1 23 12 65.71% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.05768 x 10-1 47 16 35 32 74.60% 47.76% 63 67 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.044249'
Avg. expression score for this sample: '76.5618'
Avg. expression score in LCM sample: '12.8754'
Tissue used: 'pure endosperm, no chalazal'
AT3G45020 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.87379 x 10-1 60 36 11 7 62.50% 38.89% 96 18 TAIR8 Avg. embryo expression (dissected): '96.6224'
Avg. embryo expression (LCM): '115.501'
AT3G45020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.0214 x 10-2 43 18 67 73 70.49% 52.14% 61 140 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.044249'
Avg. expression score for this sample: '65.0249'
Avg. expression score in LCM sample: '12.8754'
Tissue used: 'full endosperm'
AT3G45020 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.64 x 10-4 8 22 26.67% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45020 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.0 x 10-9 68 6 91.89% 74 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45010 scpl48 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 529 5 99.06% 534 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45010 scpl48 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.4417 x 10-2 161 99 61.92% 260 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45010 scpl48 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.76 x 10-4 1313 186 682 798 87.59% 53.92% 1499 1480 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.094361'
Avg. expression score for this sample: '1338.37'
Avg. expression score in LCM sample: '840.001'
Tissue used: 'full endosperm'
AT3G45010 scpl48 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.7 x 10-12 100 4 96.15% 104 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45010 scpl48 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.33338 x 10-1 45 12 22 9 78.95% 29.03% 57 31 TAIR8 Avg. embryo expression (dissected): '109.234'
Avg. embryo expression (LCM): '11.039'
AT3G45010 scpl48 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.5799 x 10-2 712 151 472 386 82.50% 44.99% 863 858 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.094361'
Avg. expression score for this sample: '1292.64'
Avg. expression score in LCM sample: '840.001'
Tissue used: 'pure endosperm, no chalazal'
AT3G45000 VPS24.2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.6985 x 10-1 1 1 5 3 50.00% 37.50% 2 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '188.835'
Avg. expression score in LCM sample: '64.0094'
Tissue used: 'pure endosperm, no chalazal'
AT3G45000 VPS24.2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 1 0 0.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '59.6539'
Avg. embryo expression (LCM): '21.0356'
AT3G45000 VPS24.2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.81659 x 10-1 4 2 1 8 66.67% 88.89% 6 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '55.5349'
Avg. expression score in LCM sample: '64.0094'
Tissue used: 'full endosperm'
AT3G45000 VPS24.2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45000 VPS24.2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G45000 VPS24.2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.38462 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G44990 XTH31 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G44990 XTH31 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G44990 XTH31 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G44990 XTH31 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G44990 XTH31 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G44990 XTH31 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G44980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G44980 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G44980 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G44980 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G44980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G44980 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'