| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G353729 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.98865 x 10-2 | 194 | 162 | 328 | 206 | 54.49% | 38.58% | 356 | 534 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0898865' χ2 p-value for Mo17 x B73: '1.30e-07' Biased in favor of strain: '' |
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| GRMZM2G353729 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.1937 x 10-3 | 5 | 16 | 0 | 21 | 23.81% | 100.00% | 21 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000031' χ2 p-value for Mo17 x B73: '.0011937' Biased in favor of strain: 'Mo17' |
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| GRMZM2G353718 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.316146 x 10-1 | 29 | 9 | 10 | 13 | 76.32% | 56.52% | 38 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0011769' χ2 p-value for Mo17 x B73: '.5316146' Biased in favor of strain: '' |
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| GRMZM2G353718 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.57801 x 10-2 | 7 | 10 | 16 | 10 | 41.18% | 38.46% | 17 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0257801' χ2 p-value for Mo17 x B73: '.0022819' Biased in favor of strain: '' |
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| GRMZM2G353553 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.929801 x 10-1 | 13 | 6 | 8 | 6 | 68.42% | 42.86% | 19 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1082937' χ2 p-value for Mo17 x B73: '.5929801' Biased in favor of strain: '' |
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| GRMZM2G353553 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.0716 x 10-2 | 193 | 159 | 260 | 454 | 54.83% | 63.59% | 352 | 714 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.46e-06' χ2 p-value for Mo17 x B73: '.080716' Biased in favor of strain: '' |
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| GRMZM2G353548 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.166645 x 10-1 | 17 | 9 | 19 | 3 | 65.38% | 13.64% | 26 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1166645' χ2 p-value for Mo17 x B73: '.0006467' Biased in favor of strain: '' |
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| GRMZM2G353548 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.170598 x 10-1 | 11 | 7 | 15 | 11 | 61.11% | 42.31% | 18 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170598' χ2 p-value for Mo17 x B73: '.008418' Biased in favor of strain: '' |
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| GRMZM2G353497 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.73 x 10-6 | 0 | 33 | 0 | 22 | 0.00% | 100.00% | 33 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.22e-09' χ2 p-value for Mo17 x B73: '2.73e-06' Biased in favor of strain: 'Mo17' |
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| GRMZM2G353497 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G353485 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.43 x 10-8 | 34 | 1 | 55 | 0 | 97.14% | 0.00% | 35 | 55 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.43e-08' χ2 p-value for Mo17 x B73: '1.21e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G353485 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.96 x 10-4 | 0 | 25 | 0 | 23 | 0.00% | 100.00% | 25 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.54e-12' χ2 p-value for Mo17 x B73: '.000696' Biased in favor of strain: 'Mo17' |
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| GRMZM2G353446 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G353446 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 4 | 0.00% | 100.00% | 1 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G353444 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 5 | 0.00% | 100.00% | 1 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: '' |
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| GRMZM2G353444 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G353213 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1141 | 444 | 890 | 433 | 71.99% | 32.73% | 1585 | 1323 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.32e-36' Biased in favor of strain: 'B73' |
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| GRMZM2G353213 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2618 | 458 | 1349 | 1137 | 85.11% | 45.74% | 3076 | 2486 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G353209 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.42 x 10-5 | 345 | 240 | 214 | 121 | 58.97% | 36.12% | 585 | 335 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000142' χ2 p-value for Mo17 x B73: '3.75e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G353209 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.064083 x 10-1 | 172 | 105 | 197 | 128 | 62.09% | 39.38% | 277 | 325 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1064083' χ2 p-value for Mo17 x B73: '1.75e-25' Biased in favor of strain: '' |
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| GRMZM2G353195 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.059032 x 10-1 | 7 | 3 | 9 | 1 | 70.00% | 10.00% | 10 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2059032' χ2 p-value for Mo17 x B73: '.011412' Biased in favor of strain: '' |
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| GRMZM2G353195 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 29 | 4 | 3 | 2 | 87.88% | 40.00% | 33 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0097406' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: '' |
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| GRMZM2G353147 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.4418 x 10-3 | 226 | 166 | 217 | 122 | 57.65% | 35.99% | 392 | 339 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0024418' χ2 p-value for Mo17 x B73: '2.47e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G353147 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.0 x 10-10 | 241 | 46 | 144 | 114 | 83.97% | 44.19% | 287 | 258 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.00e-10' χ2 p-value for Mo17 x B73: '1.86e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G353076 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 2 | 0 | 0.00% | 0.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G353076 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G352959 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 0 | 4 | 0.00% | 100.00% | 3 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G352959 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 0 | 13 | 0.00% | 100.00% | 4 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046775' χ2 p-value for Mo17 x B73: '.0107875' Biased in favor of strain: '' |
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| GRMZM2G352898 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.083652 x 10-1 | 16 | 7 | 8 | 9 | 69.57% | 52.94% | 23 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0605689' χ2 p-value for Mo17 x B73: '.8083652' Biased in favor of strain: '' |
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| GRMZM2G352898 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 1 | 0 | 100.00% | 0.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G352883 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.905175 x 10-1 | 280 | 195 | 236 | 239 | 58.95% | 50.32% | 475 | 475 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000962' χ2 p-value for Mo17 x B73: '.8905175' Biased in favor of strain: '' |
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| GRMZM2G352883 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.73 x 10-6 | 702 | 237 | 302 | 422 | 74.76% | 58.29% | 939 | 724 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.43e-07' χ2 p-value for Mo17 x B73: '1.73e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G352708 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.9686 x 10-2 | 28 | 10 | 31 | 19 | 73.68% | 38.00% | 38 | 50 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0035005' χ2 p-value for Mo17 x B73: '.089686' Biased in favor of strain: '' |
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| GRMZM2G352708 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.373516 x 10-1 | 106 | 10 | 29 | 52 | 91.38% | 64.20% | 116 | 81 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.64e-08' χ2 p-value for Mo17 x B73: '.6373516' Biased in favor of strain: '' |
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| GRMZM2G352678 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.88396 x 10-1 | 230 | 227 | 97 | 52 | 50.33% | 34.90% | 457 | 149 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.888396' χ2 p-value for Mo17 x B73: '.0002273' Biased in favor of strain: '' |
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| GRMZM2G352678 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.1412 x 10-2 | 77 | 6 | 12 | 8 | 92.77% | 40.00% | 83 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.54e-07' χ2 p-value for Mo17 x B73: '.011412' Biased in favor of strain: '' |
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| GRMZM2G352618 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.21 x 10-18 | 355 | 66 | 271 | 101 | 84.32% | 27.15% | 421 | 372 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.21e-18' Biased in favor of strain: 'B73' |
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| GRMZM2G352618 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.39 x 10-15 | 844 | 240 | 331 | 364 | 77.86% | 52.37% | 1084 | 695 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.39e-15' χ2 p-value for Mo17 x B73: '1.32e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G352607 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.457497 x 10-1 | 94 | 67 | 91 | 76 | 58.39% | 45.51% | 161 | 167 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0333455' χ2 p-value for Mo17 x B73: '.2457497' Biased in favor of strain: '' |
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| GRMZM2G352607 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999997 x 10-1 | 47 | 18 | 16 | 32 | 72.31% | 66.67% | 65 | 48 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3346806' χ2 p-value for Mo17 x B73: '.9999997' Biased in favor of strain: '' |
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| GRMZM2G352601 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.25094 x 10-2 | 4 | 15 | 3 | 11 | 21.05% | 78.57% | 19 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0116169' χ2 p-value for Mo17 x B73: '.0325094' Biased in favor of strain: 'Mo17' |
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| GRMZM2G352601 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 0 | 8 | 100.00% | 100.00% | 5 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G352431 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.254423 x 10-1 | 55 | 43 | 63 | 28 | 56.12% | 30.77% | 98 | 91 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2254423' χ2 p-value for Mo17 x B73: '.0002435' Biased in favor of strain: '' |
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| GRMZM2G352431 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 4.25 x 10-8 | 22 | 42 | 47 | 27 | 34.38% | 36.49% | 64 | 74 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.25e-08' χ2 p-value for Mo17 x B73: '3.64e-08' Biased in favor of strain: '' |
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| GRMZM2G352428 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.498174 x 10-1 | 15 | 22 | 9 | 27 | 40.54% | 75.00% | 37 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2498174' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: '' |
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| GRMZM2G352428 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 4 | 1 | 4 | 63.64% | 80.00% | 11 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8311576' χ2 p-value for Mo17 x B73: '.5270893' Biased in favor of strain: '' |
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| GRMZM2G352415 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 13843 | 4799 | 15101 | 6036 | 74.26% | 28.56% | 18642 | 21137 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G352415 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 6307 | 776 | 3897 | 2471 | 89.04% | 38.80% | 7083 | 6368 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G352274 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.22517 x 10-1 | 119 | 166 | 161 | 157 | 41.75% | 49.37% | 285 | 318 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0053686' χ2 p-value for Mo17 x B73: '.822517' Biased in favor of strain: '' |
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| GRMZM2G352274 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 2 | 7 | 83.33% | 77.78% | 6 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.4795002' Biased in favor of strain: '' |
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| GRMZM2G352234 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.388827 x 10-1 | 18 | 14 | 19 | 17 | 56.25% | 47.22% | 32 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795001' χ2 p-value for Mo17 x B73: '.7388827' Biased in favor of strain: '' |
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| GRMZM2G352234 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.55002 x 10-2 | 13 | 0 | 10 | 8 | 100.00% | 44.44% | 13 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0107877' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM2G352159 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 21 | 13 | 12 | 12 | 61.76% | 50.00% | 34 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.170067' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G352159 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 1 | 6 | 75.00% | 85.71% | 4 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7236798' χ2 p-value for Mo17 x B73: '.2850494' Biased in favor of strain: '' |
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| GRMZM2G352132 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.36 x 10-9 | 646 | 439 | 785 | 569 | 59.54% | 42.02% | 1085 | 1354 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.29e-10' χ2 p-value for Mo17 x B73: '4.36e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G352132 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.173108 x 10-1 | 58 | 99 | 60 | 140 | 36.94% | 70.00% | 157 | 200 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.77e-15' χ2 p-value for Mo17 x B73: '.3173108' Biased in favor of strain: '' |
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| GRMZM2G352129 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.916855 x 10-1 | 381 | 264 | 349 | 372 | 59.07% | 51.60% | 645 | 721 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.09e-06' χ2 p-value for Mo17 x B73: '.3916855' Biased in favor of strain: '' |
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| GRMZM2G352129 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.99473 x 10-2 | 745 | 322 | 336 | 591 | 69.82% | 63.75% | 1067 | 927 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0287991' χ2 p-value for Mo17 x B73: '.0599473' Biased in favor of strain: '' |
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| GRMZM2G352042 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.850494 x 10-1 | 5 | 9 | 2 | 10 | 35.71% | 83.33% | 14 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2850494' χ2 p-value for Mo17 x B73: '.0209213' Biased in favor of strain: '' |
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| GRMZM2G352042 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 1 | 3 | 4 | 90.91% | 57.14% | 11 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0880834' χ2 p-value for Mo17 x B73: '.59298' Biased in favor of strain: '' |
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| GRMZM2G352023 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 5 | 3 | 1 | 64.29% | 25.00% | 14 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2850494' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G352023 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 3 | 17 | 0.00% | 85.00% | 4 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046775' χ2 p-value for Mo17 x B73: '.0819903' Biased in favor of strain: '' |
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| GRMZM2G351941 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.947 x 10-4 | 39 | 14 | 36 | 8 | 73.58% | 18.18% | 53 | 44 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0005947' χ2 p-value for Mo17 x B73: '.0000243' Biased in favor of strain: 'B73' |
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| GRMZM2G351941 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.0405 x 10-3 | 29 | 3 | 16 | 10 | 90.62% | 38.46% | 32 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0040405' χ2 p-value for Mo17 x B73: '.0022819' Biased in favor of strain: 'B73' |
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| GRMZM2G351937 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.173105 x 10-1 | 36 | 28 | 28 | 51 | 56.25% | 64.56% | 64 | 79 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0096618' Biased in favor of strain: '' |
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| GRMZM2G351937 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.03371 x 10-1 | 103 | 47 | 72 | 84 | 68.67% | 53.85% | 150 | 156 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.603371' χ2 p-value for Mo17 x B73: '.0006817' Biased in favor of strain: '' |
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| GRMZM2G351921 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.42 x 10-21 | 307 | 40 | 188 | 43 | 88.47% | 18.61% | 347 | 231 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.42e-21' Biased in favor of strain: 'B73' |
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| GRMZM2G351921 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.9 x 10-9 | 72 | 1 | 125 | 4 | 98.63% | 3.10% | 73 | 129 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.90e-09' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G351810 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G351810 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 0 | 0 | 100.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G351786 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 6 | 0 | 50.00% | 0.00% | 4 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G351786 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 3 | 3 | 2 | 57.14% | 40.00% | 7 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5929702' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: '' |
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| GRMZM2G351775 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.647471 x 10-1 | 204 | 198 | 152 | 214 | 50.75% | 58.47% | 402 | 366 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7647471' χ2 p-value for Mo17 x B73: '.001192' Biased in favor of strain: '' |
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| GRMZM2G351775 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.315 x 10-4 | 281 | 51 | 124 | 168 | 84.64% | 57.53% | 332 | 292 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.75e-12' χ2 p-value for Mo17 x B73: '.0009315' Biased in favor of strain: 'B73' |
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| GRMZM2G351747 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.33 x 10-13 | 196 | 59 | 173 | 60 | 76.86% | 25.75% | 255 | 233 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.55e-18' χ2 p-value for Mo17 x B73: '1.33e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G351747 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.75 x 10-19 | 160 | 0 | 91 | 7 | 100.00% | 7.14% | 160 | 98 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.75e-19' χ2 p-value for Mo17 x B73: '7.47e-36' Biased in favor of strain: 'B73' |
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| GRMZM2G351716 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.74 x 10-6 | 20 | 0 | 22 | 0 | 100.00% | 0.00% | 20 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.74e-06' χ2 p-value for Mo17 x B73: '2.73e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G351716 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G351599 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.32 x 10-4 | 0 | 12 | 0 | 19 | 0.00% | 100.00% | 12 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.0000131' Biased in favor of strain: 'Mo17' |
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| GRMZM2G351599 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G351582 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 3100 | 517 | 2956 | 477 | 85.71% | 13.89% | 3617 | 3433 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G351582 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.6 x 10-25 | 1037 | 193 | 534 | 579 | 84.31% | 52.02% | 1230 | 1113 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.60e-25' Biased in favor of strain: 'B73' |
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| GRMZM2G351577 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.001795 x 10-1 | 61 | 41 | 43 | 48 | 59.80% | 52.75% | 102 | 91 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0476704' χ2 p-value for Mo17 x B73: '.6001795' Biased in favor of strain: '' |
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| GRMZM2G351577 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.026055 x 10-1 | 65 | 24 | 60 | 69 | 73.03% | 53.49% | 89 | 129 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2026055' χ2 p-value for Mo17 x B73: '.0014977' Biased in favor of strain: '' |
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| GRMZM2G351514 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 2 | 1 | 50.00% | 33.33% | 2 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G351514 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 3 | 5 | 50.00% | 62.50% | 4 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4794928' χ2 p-value for Mo17 x B73: '.8025872' Biased in favor of strain: '' |
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| GRMZM2G351505 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | MEG | 7.74 x 10-6 | 92 | 0 | 0 | 20 | 100.00% | 100.00% | 92 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.67e-22' χ2 p-value for Mo17 x B73: '7.74e-06' Biased in favor of strain: '' |
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| GRMZM2G351505 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | MEG | 1.43059 x 10-2 | 22 | 0 | 0 | 12 | 100.00% | 100.00% | 22 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009112' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G351484 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.86683 x 10-2 | 283 | 238 | 227 | 286 | 54.32% | 55.75% | 521 | 513 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0486683' χ2 p-value for Mo17 x B73: '.0091897' Biased in favor of strain: '' |
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| GRMZM2G351484 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.69 x 10-6 | 428 | 383 | 151 | 467 | 52.77% | 75.57% | 811 | 618 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.75e-17' χ2 p-value for Mo17 x B73: '2.69e-06' Biased in favor of strain: 'Mo17' |
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| GRMZM2G351482 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.4105 x 10-3 | 16 | 39 | 18 | 39 | 29.09% | 68.42% | 55 | 57 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0019266' χ2 p-value for Mo17 x B73: '.0054105' Biased in favor of strain: 'Mo17' |
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| GRMZM2G351482 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.07 x 10-10 | 78 | 0 | 19 | 0 | 100.00% | 0.00% | 78 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.24e-10' χ2 p-value for Mo17 x B73: '7.07e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G351454 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.39 x 10-9 | 120 | 229 | 157 | 329 | 34.38% | 67.70% | 349 | 486 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.39e-09' χ2 p-value for Mo17 x B73: '6.09e-15' Biased in favor of strain: 'Mo17' |
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| GRMZM2G351454 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.316854 x 10-1 | 120 | 101 | 71 | 163 | 54.30% | 69.66% | 221 | 234 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000096' χ2 p-value for Mo17 x B73: '.3316854' Biased in favor of strain: '' |
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| GRMZM2G351387 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.74 x 10-9 | 537 | 357 | 539 | 297 | 60.07% | 35.53% | 894 | 836 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.74e-09' χ2 p-value for Mo17 x B73: '5.77e-17' Biased in favor of strain: 'B73' |
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| GRMZM2G351387 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.32 x 10-7 | 687 | 238 | 338 | 402 | 74.27% | 54.32% | 925 | 740 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.32e-07' χ2 p-value for Mo17 x B73: '1.06e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G351382 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 3 | 4 | 1 | 25.00% | 20.00% | 4 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: '' |
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| GRMZM2G351382 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 3 | 4 | 100.00% | 57.14% | 4 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.59298' Biased in favor of strain: '' |
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| GRMZM2G351373 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 2 | 0 | 100.00% | 0.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G351373 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 2 | 0 | 100.00% | 0.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |