Displaying data sets 76001 - 76100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G46670 UGT76E11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 2 1 0 0 66.67% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.73615'
Avg. expression score in LCM sample: '2.54274'
Tissue used: 'pure endosperm, no chalazal'
AT3G46670 UGT76E11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 1 0 0 66.67% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.16621'
Avg. expression score in LCM sample: '2.54274'
Tissue used: 'full endosperm'
AT3G46668 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '30.9213'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G46668 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46668 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '26.7128'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G46668 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46668 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46668 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '25.5851'
Avg. embryo expression (LCM): '73.543'
AT3G46666 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G46666 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46666 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G46666 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46666 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.566538'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G46666 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46660 UGT76E12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.4932 x 10-2 17 0 100.00% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46660 UGT76E12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46660 UGT76E12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.4 x 10-6 182 3 98.38% 185 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46660 UGT76E12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 1 2 1 50.00% 33.33% 2 3 TAIR8 Avg. embryo expression (dissected): '4.24324'
Avg. embryo expression (LCM): '4.70947'
AT3G46660 UGT76E12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 4 5 100.00% 55.56% 3 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.450839'
Avg. expression score for this sample: '5.50505'
Avg. expression score in LCM sample: '5.51172'
Tissue used: 'pure endosperm, no chalazal'
AT3G46660 UGT76E12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.52023 x 10-1 16 2 3 6 88.89% 66.67% 18 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.450839'
Avg. expression score for this sample: '7.90027'
Avg. expression score in LCM sample: '5.51172'
Tissue used: 'full endosperm'
AT3G46658 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.70622 x 10-1 13 1 2 9 92.86% 81.82% 14 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.127131'
Avg. expression score for this sample: '4.98895'
Avg. expression score in LCM sample: '2.36636'
Tissue used: 'full endosperm'
AT3G46658 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.83891 x 10-1 19 0 100.00% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46658 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 1 3 100.00% 75.00% 2 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.127131'
Avg. expression score for this sample: '1.38878'
Avg. expression score in LCM sample: '2.36636'
Tissue used: 'pure endosperm, no chalazal'
AT3G46658 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.6619 x 10-2 202 10 95.28% 212 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46658 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46658 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 8 4 5 1 66.67% 16.67% 12 6 TAIR8 Avg. embryo expression (dissected): '4.33315'
Avg. embryo expression (LCM): '1.34377'
AT3G46650 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 2.82051 x 10-1 6 1 0 0 85.71% 7 0 TAIR8 Avg. embryo expression (dissected): '1.54544'
Avg. embryo expression (LCM): '0'
AT3G46650 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.44444 x 10-1 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.2381 x 10-1 1 0 4 0 100.00% 0.00% 1 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.163707'
Avg. expression score for this sample: '.987401'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G46650 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.49887 x 10-1 6 10 1 4 37.50% 80.00% 16 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.163707'
Avg. expression score for this sample: '2.29702'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G46650 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.956 x 10-3 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46640 PCL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.32796 x 10-1 357 102 77.78% 459 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46640 PCL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.41748 x 10-1 82 24 77.36% 106 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46640 PCL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.9 x 10-14 497 56 89.87% 553 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46640 PCL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.14477 x 10-1 140 104 66 65 57.38% 49.62% 244 131 TAIR8 Avg. embryo expression (dissected): '213.717'
Avg. embryo expression (LCM): '53.9265'
AT3G46640 PCL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.69338 x 10-1 197 72 108 194 73.23% 64.24% 269 302 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.5e-06'
Avg. expression score for this sample: '169.51'
Avg. expression score in LCM sample: '89.8631'
Tissue used: 'pure endosperm, no chalazal'
AT3G46640 PCL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.1 x 10-8 201 35 129 434 85.17% 77.09% 236 563 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.5e-06'
Avg. expression score for this sample: '205.473'
Avg. expression score in LCM sample: '89.8631'
Tissue used: 'full endosperm'
AT3G46630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.17082 x 10-1 8 1 4 11 88.89% 73.33% 9 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.584973'
Avg. expression score for this sample: '47.2748'
Avg. expression score in LCM sample: '18.8427'
Tissue used: 'full endosperm'
AT3G46630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 10 3 76.92% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 2 1 1 66.67% 50.00% 6 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.584973'
Avg. expression score for this sample: '32.8357'
Avg. expression score in LCM sample: '18.8427'
Tissue used: 'pure endosperm, no chalazal'
AT3G46630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 9 3 75.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46630 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.0773 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46630 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.81251 x 10-1 9 9 2 6 50.00% 75.00% 18 8 TAIR8 Avg. embryo expression (dissected): '92.011'
Avg. embryo expression (LCM): '44.2815'
AT3G46620 RDUF1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.537 x 10-3 1206 962 265 254 55.63% 48.94% 2168 519 TAIR8 Avg. embryo expression (dissected): '5064.84'
Avg. embryo expression (LCM): '333.669'
AT3G46620 RDUF1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 7468 598 92.59% 8066 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46620 RDUF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.3 x 10-12 3324 910 1000 1644 78.51% 62.18% 4234 2644 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8957.56'
Avg. expression score in LCM sample: '461.323'
Tissue used: 'pure endosperm, no chalazal'
AT3G46620 RDUF1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.8473 x 10-2 886 264 77.04% 1150 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46620 RDUF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 4966 1173 2063 9800 80.89% 82.61% 6139 11863 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8486.1'
Avg. expression score in LCM sample: '461.323'
Tissue used: 'full endosperm'
AT3G46620 RDUF1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 5213 544 90.55% 5757 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46613 RTFL4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46613 RTFL4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46613 RTFL4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46613 RTFL4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G46613 RTFL4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G46613 RTFL4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G46610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.30225 x 10-1 37 13 22 63 74.00% 74.12% 50 85 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.571154'
Avg. expression score for this sample: '173.534'
Avg. expression score in LCM sample: '82.7199'
Tissue used: 'full endosperm'
AT3G46610 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.11406 x 10-1 70 36 66.04% 106 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.14567 x 10-1 21 9 10 5 70.00% 33.33% 30 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.571154'
Avg. expression score for this sample: '105.132'
Avg. expression score in LCM sample: '82.7199'
Tissue used: 'pure endosperm, no chalazal'
AT3G46610 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.3 x 10-6 120 12 90.91% 132 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46610 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46610 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.41314 x 10-1 33 34 14 5 49.25% 26.32% 67 19 TAIR8 Avg. embryo expression (dissected): '296.205'
Avg. embryo expression (LCM): '267.447'
AT3G46600 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 2 0 2 0.00% 100.00% 2 2 TAIR8 Avg. embryo expression (dissected): '34.3434'
Avg. embryo expression (LCM): '5.53833'
AT3G46600 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.1204 x 10-2 22 9 70.97% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 1 100.00% 50.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.022609'
Avg. expression score for this sample: '19.8785'
Avg. expression score in LCM sample: '2.88079'
Tissue used: 'pure endosperm, no chalazal'
AT3G46600 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.31 x 10-3 0 0 0 21 100.00% 0 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.022609'
Avg. expression score for this sample: '37.9025'
Avg. expression score in LCM sample: '2.88079'
Tissue used: 'full endosperm'
AT3G46600 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.17328 x 10-1 26 3 89.66% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46590 TRFL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.893 x 10-3 569 128 81.64% 697 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46590 TRFL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.47716 x 10-1 126 39 76.36% 165 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46590 TRFL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1090 35 96.89% 1125 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46590 TRFL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.26539 x 10-1 115 70 32 14 62.16% 30.43% 185 46 TAIR8 Avg. embryo expression (dissected): '239.35'
Avg. embryo expression (LCM): '151.431'
AT3G46590 TRFL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.4922 x 10-2 241 47 102 136 83.68% 57.14% 288 238 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.8e-12'
Avg. expression score for this sample: '339.077'
Avg. expression score in LCM sample: '175.934'
Tissue used: 'pure endosperm, no chalazal'
AT3G46590 TRFL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.1 x 10-13 543 101 181 517 84.32% 74.07% 644 698 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.8e-12'
Avg. expression score for this sample: '397.741'
Avg. expression score in LCM sample: '175.934'
Tissue used: 'full endosperm'
AT3G46585 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G46585 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46585 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G46585 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46585 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46585 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G46580 MBD5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.39622 x 10-1 16 27 5 6 37.21% 54.55% 43 11 TAIR8 Avg. embryo expression (dissected): '78.3718'
Avg. embryo expression (LCM): '43.7038'
AT3G46580 MBD5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1831 x 10-1 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46580 MBD5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.16543 x 10-1 6 10 3 33 37.50% 91.67% 16 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.107174'
Avg. expression score for this sample: '58.9057'
Avg. expression score in LCM sample: '11.9347'
Tissue used: 'pure endosperm, no chalazal'
AT3G46580 MBD5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 9 2 81.82% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46580 MBD5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.1768 18 18 8 62 50.00% 88.57% 36 70 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.107174'
Avg. expression score for this sample: '60.9918'
Avg. expression score in LCM sample: '11.9347'
Tissue used: 'full endosperm'
AT3G46580 MBD5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.37209 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46570 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46570 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46570 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46570 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.967063'
Avg. embryo expression (LCM): '0'
AT3G46570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G46570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.49603'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G46560 TIM9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 11 3 9 14 78.57% 60.87% 14 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '162.866'
Avg. expression score in LCM sample: '63.0688'
Tissue used: 'full endosperm'
AT3G46560 TIM9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.13833 x 10-1 25 14 64.10% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46560 TIM9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 1 1 100.00% 50.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '244.971'
Avg. expression score in LCM sample: '63.0688'
Tissue used: 'pure endosperm, no chalazal'
AT3G46560 TIM9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-5 64 1 98.46% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46560 TIM9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.45845 x 10-1 4 6 40.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G46560 TIM9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 4.00323 x 10-1 8 3 0 0 72.73% 11 0 TAIR8 Avg. embryo expression (dissected): '830.722'
Avg. embryo expression (LCM): '998.131'
AT3G46550 SOS5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.03719 x 10-1 45 15 35 15 75.00% 30.00% 60 50 TAIR8 Avg. embryo expression (dissected): '331.344'
Avg. embryo expression (LCM): '68.1931'
AT3G46550 SOS5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 x 10-7 74 0 100.00% 74 TAIR8 Mutant effect: 'N/A (not a MEG)'