| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G356938 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1003 | 357 | 1037 | 398 | 73.75% | 27.74% | 1360 | 1435 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G356938 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.0596 x 10-3 | 58 | 12 | 81 | 23 | 82.86% | 22.12% | 70 | 104 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0040596' χ2 p-value for Mo17 x B73: '5.53e-22' Biased in favor of strain: 'B73' |
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| GRMZM2G356894 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.054 x 10-3 | 152 | 100 | 153 | 83 | 60.32% | 35.17% | 252 | 236 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.001054' χ2 p-value for Mo17 x B73: '5.20e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G356894 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.64106 x 10-2 | 38 | 9 | 32 | 43 | 80.85% | 57.33% | 47 | 75 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.03913' χ2 p-value for Mo17 x B73: '.0864106' Biased in favor of strain: '' |
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| GRMZM2G356839 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.26 x 10-6 | 142 | 48 | 116 | 53 | 74.74% | 31.36% | 190 | 169 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.14e-12' χ2 p-value for Mo17 x B73: '1.26e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G356839 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.4514 x 10-2 | 93 | 28 | 42 | 53 | 76.86% | 55.79% | 121 | 95 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0173877' χ2 p-value for Mo17 x B73: '.024514' Biased in favor of strain: '' |
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| GRMZM2G356817 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.65 x 10-5 | 497 | 325 | 430 | 323 | 60.46% | 42.90% | 822 | 753 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.98e-09' χ2 p-value for Mo17 x B73: '.0000965' Biased in favor of strain: 'B73' |
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| GRMZM2G356817 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.612707 x 10-1 | 231 | 181 | 164 | 294 | 56.07% | 64.19% | 412 | 458 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.03e-06' χ2 p-value for Mo17 x B73: '.2612707' Biased in favor of strain: '' |
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| GRMZM2G356676 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 7 | 0 | 3 | 0.00% | 100.00% | 7 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G356676 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 5 | 0 | 9 | 28.57% | 100.00% | 7 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0325079' χ2 p-value for Mo17 x B73: '.0338949' Biased in favor of strain: '' |
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| GRMZM2G356653 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G356653 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 3 | 0 | 100.00% | 0.00% | 2 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G356579 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 22 | 234 | 16 | 332 | 8.59% | 95.40% | 256 | 348 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17' |
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| GRMZM2G356579 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.67 x 10-25 | 26 | 117 | 11 | 269 | 18.18% | 96.07% | 143 | 280 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.13e-35' χ2 p-value for Mo17 x B73: '1.67e-25' Biased in favor of strain: 'Mo17' |
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| GRMZM2G356545 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.54 x 10-5 | 56 | 3 | 37 | 8 | 94.92% | 17.78% | 59 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.20e-12' χ2 p-value for Mo17 x B73: '.0000154' Biased in favor of strain: 'B73' |
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| GRMZM2G356545 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.21 x 10-5 | 72 | 9 | 62 | 28 | 88.89% | 31.11% | 81 | 90 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000221' χ2 p-value for Mo17 x B73: '8.34e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G356423 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 1 | 5 | 66.67% | 83.33% | 3 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: '' |
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| GRMZM2G356423 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 5 | 2 | 100.00% | 28.57% | 2 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0325094' Biased in favor of strain: '' |
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| GRMZM2G356256 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 1 | 0 | 0.00% | 0.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G356256 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G356204 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.15 x 10-26 | 134 | 6 | 116 | 2 | 95.71% | 1.69% | 140 | 118 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.83e-27' χ2 p-value for Mo17 x B73: '9.15e-26' Biased in favor of strain: 'B73' |
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| GRMZM2G356204 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.11 x 10-9 | 86 | 4 | 67 | 3 | 95.56% | 4.29% | 90 | 70 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.11e-09' χ2 p-value for Mo17 x B73: '1.72e-28' Biased in favor of strain: 'B73' |
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| GRMZM2G356198 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.16 x 10-6 | 446 | 297 | 406 | 285 | 60.03% | 41.24% | 743 | 691 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.60e-08' χ2 p-value for Mo17 x B73: '4.16e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G356198 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.5812 x 10-3 | 289 | 108 | 231 | 254 | 72.80% | 52.37% | 397 | 485 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0095812' χ2 p-value for Mo17 x B73: '2.41e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G356178 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.663317 x 10-1 | 78 | 71 | 52 | 120 | 52.35% | 69.77% | 149 | 172 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5663317' χ2 p-value for Mo17 x B73: '2.16e-07' Biased in favor of strain: '' |
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| GRMZM2G356178 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.34036 x 10-1 | 157 | 111 | 105 | 226 | 58.58% | 68.28% | 268 | 331 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0049903' χ2 p-value for Mo17 x B73: '.534036' Biased in favor of strain: '' |
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| GRMZM2G356076 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.07 x 10-7 | 9 | 46 | 2 | 35 | 16.36% | 94.59% | 55 | 37 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.07e-07' χ2 p-value for Mo17 x B73: '5.79e-08' Biased in favor of strain: 'Mo17' |
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| GRMZM2G356076 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.1886 x 10-3 | 5 | 28 | 5 | 35 | 15.15% | 87.50% | 33 | 40 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.44e-10' χ2 p-value for Mo17 x B73: '.0051886' Biased in favor of strain: 'Mo17' |
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| GRMZM2G356034 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.218734 x 10-1 | 20 | 17 | 31 | 14 | 54.05% | 31.11% | 37 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6218734' χ2 p-value for Mo17 x B73: '.0112701' Biased in favor of strain: '' |
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| GRMZM2G356034 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 0 | 7 | 0.00% | 100.00% | 3 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.0613688' Biased in favor of strain: '' |
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| GRMZM2G355906 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 3 | 1 | 66.67% | 25.00% | 3 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G355906 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 0 | 0 | 66.67% | 3 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G355806 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.016996 x 10-1 | 26 | 34 | 22 | 34 | 43.33% | 60.71% | 60 | 56 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3016996' χ2 p-value for Mo17 x B73: '.1088094' Biased in favor of strain: '' |
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| GRMZM2G355806 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.016994 x 10-1 | 23 | 19 | 3 | 53 | 54.76% | 94.64% | 42 | 56 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1016994' χ2 p-value for Mo17 x B73: '8.95e-06' Biased in favor of strain: '' |
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| GRMZM2G355771 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.892111 x 10-1 | 132 | 121 | 136 | 117 | 52.17% | 46.25% | 253 | 253 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4892111' χ2 p-value for Mo17 x B73: '.2322747' Biased in favor of strain: '' |
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| GRMZM2G355771 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.728305 x 10-1 | 108 | 58 | 70 | 146 | 65.06% | 67.59% | 166 | 216 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6605749' χ2 p-value for Mo17 x B73: '.7728305' Biased in favor of strain: '' |
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| GRMZM2G355752 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 522 | 84 | 432 | 110 | 86.14% | 20.30% | 606 | 542 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G355752 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 3 | 0 | 100.00% | 0.00% | 3 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G355679 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.45 x 10-10 | 0 | 61 | 1 | 44 | 0.00% | 97.78% | 61 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.71e-15' χ2 p-value for Mo17 x B73: '1.45e-10' Biased in favor of strain: 'Mo17' |
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| GRMZM2G355679 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.68 x 10-9 | 2 | 58 | 11 | 116 | 3.33% | 91.34% | 60 | 127 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.31e-25' χ2 p-value for Mo17 x B73: '3.68e-09' Biased in favor of strain: 'Mo17' |
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| GRMZM2G355636 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.09 x 10-18 | 558 | 247 | 462 | 235 | 69.32% | 33.72% | 805 | 697 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.86e-28' χ2 p-value for Mo17 x B73: '8.09e-18' Biased in favor of strain: 'B73' |
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| GRMZM2G355636 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.98807 x 10-2 | 117 | 38 | 103 | 57 | 75.48% | 35.62% | 155 | 160 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0198807' χ2 p-value for Mo17 x B73: '8.13e-17' Biased in favor of strain: '' |
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| GRMZM2G355572 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.66 x 10-7 | 946 | 735 | 556 | 371 | 56.28% | 40.02% | 1681 | 927 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.66e-07' χ2 p-value for Mo17 x B73: '1.23e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G355572 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.610678 x 10-1 | 42 | 15 | 75 | 86 | 73.68% | 53.42% | 57 | 161 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2610678' χ2 p-value for Mo17 x B73: '.0003617' Biased in favor of strain: '' |
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| GRMZM2G355523 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.989623 x 10-1 | 74 | 66 | 76 | 60 | 52.86% | 44.12% | 140 | 136 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4989623' χ2 p-value for Mo17 x B73: '.170067' Biased in favor of strain: '' |
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| GRMZM2G355523 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 3.4 x 10-8 | 57 | 73 | 78 | 24 | 43.85% | 23.53% | 130 | 102 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.40e-08' χ2 p-value for Mo17 x B73: '2.42e-20' Biased in favor of strain: '' |
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| GRMZM2G355499 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G355499 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G355450 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.46 x 10-7 | 388 | 237 | 500 | 347 | 62.08% | 40.97% | 625 | 847 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.54e-09' χ2 p-value for Mo17 x B73: '1.46e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G355450 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.81157 x 10-2 | 230 | 90 | 215 | 207 | 71.88% | 49.05% | 320 | 422 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0481157' χ2 p-value for Mo17 x B73: '1.64e-14' Biased in favor of strain: '' |
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| GRMZM2G355381 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G355381 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 2 | 2 | 100.00% | 50.00% | 1 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G355342 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.51 x 10-16 | 0 | 104 | 0 | 66 | 0.00% | 100.00% | 104 | 66 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.02e-24' χ2 p-value for Mo17 x B73: '4.51e-16' Biased in favor of strain: 'Mo17' |
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| GRMZM2G355342 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.6 x 10-17 | 2 | 49 | 0 | 141 | 3.92% | 100.00% | 51 | 141 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.99e-21' χ2 p-value for Mo17 x B73: '4.60e-17' Biased in favor of strain: 'Mo17' |
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| GRMZM2G355021 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 2 | 0 | 100.00% | 0.00% | 7 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G355021 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G354956 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G354956 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G354867 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.060416 x 10-1 | 28 | 55 | 41 | 57 | 33.73% | 58.16% | 83 | 98 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0030403' χ2 p-value for Mo17 x B73: '.1060416' Biased in favor of strain: '' |
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| GRMZM2G354867 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.935107 x 10-1 | 10 | 37 | 7 | 22 | 21.28% | 75.86% | 47 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.08e-11' χ2 p-value for Mo17 x B73: '.2935107' Biased in favor of strain: '' |
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| GRMZM2G354855 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 0 | 2 | 50.00% | 100.00% | 4 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G354855 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 2 | 7 | 75.00% | 77.78% | 4 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7236798' χ2 p-value for Mo17 x B73: '.4795002' Biased in favor of strain: '' |
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| GRMZM2G354834 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.63 x 10-26 | 387 | 83 | 224 | 50 | 82.34% | 18.25% | 470 | 274 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '7.63e-26' Biased in favor of strain: 'B73' |
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| GRMZM2G354834 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.996181 x 10-1 | 95 | 52 | 101 | 131 | 64.63% | 56.47% | 147 | 232 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5996181' χ2 p-value for Mo17 x B73: '.0009804' Biased in favor of strain: '' |
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| GRMZM2G354621 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.66347 x 10-2 | 131 | 95 | 132 | 62 | 57.96% | 31.96% | 226 | 194 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0166347' χ2 p-value for Mo17 x B73: '5.02e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G354621 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.700838 x 10-1 | 110 | 43 | 32 | 40 | 71.90% | 55.56% | 153 | 72 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1700838' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM2G354615 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.36516 x 10-2 | 17 | 33 | 19 | 41 | 34.00% | 68.33% | 50 | 60 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0236516' χ2 p-value for Mo17 x B73: '.0045087' Biased in favor of strain: 'Mo17' |
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| GRMZM2G354615 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 2 | 1 | 100.00% | 33.33% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: '' |
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| GRMZM2G354579 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | MEG | 1.06 x 10-22 | 713 | 0 | 2 | 102 | 100.00% | 98.08% | 713 | 104 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.06e-22' Biased in favor of strain: '' |
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| GRMZM2G354579 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | MEG | 0.0 | 5654 | 3 | 7 | 1856 | 99.95% | 99.62% | 5657 | 1863 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G354560 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.11 x 10-15 | 2 | 70 | 3 | 76 | 2.78% | 96.20% | 72 | 79 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.11e-15' χ2 p-value for Mo17 x B73: '2.15e-16' Biased in favor of strain: 'Mo17' |
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| GRMZM2G354560 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.83997 x 10-2 | 2 | 16 | 3 | 23 | 11.11% | 88.46% | 18 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.73e-07' χ2 p-value for Mo17 x B73: '.0183997' Biased in favor of strain: '' |
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| GRMZM2G354558 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 0 | 1 | 100.00% | 100.00% | 7 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G354558 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | MEG | 1.43059 x 10-2 | 54 | 0 | 0 | 12 | 100.00% | 100.00% | 54 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.03e-07' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G354539 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.012 x 10-4 | 37 | 72 | 27 | 65 | 33.94% | 70.65% | 109 | 92 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0008012' χ2 p-value for Mo17 x B73: '.0000744' Biased in favor of strain: 'Mo17' |
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| GRMZM2G354539 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5654 x 10-3 | 3 | 13 | 0 | 20 | 18.75% | 100.00% | 16 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000478' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: 'Mo17' |
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| GRMZM2G354525 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.62 x 10-5 | 1 | 18 | 1 | 20 | 5.26% | 95.24% | 19 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000962' χ2 p-value for Mo17 x B73: '.0000338' Biased in favor of strain: 'Mo17' |
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| GRMZM2G354525 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.406422 x 10-1 | 50 | 23 | 3 | 68 | 68.49% | 95.77% | 73 | 71 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7406422' χ2 p-value for Mo17 x B73: '1.96e-07' Biased in favor of strain: '' |
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| GRMZM2G354460 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.54 x 10-8 | 4 | 70 | 5 | 45 | 5.41% | 90.00% | 74 | 50 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.69e-14' χ2 p-value for Mo17 x B73: '1.54e-08' Biased in favor of strain: 'Mo17' |
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| GRMZM2G354460 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.285 x 10-4 | 37 | 3 | 59 | 12 | 92.50% | 16.90% | 40 | 71 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0005285' χ2 p-value for Mo17 x B73: '5.82e-19' Biased in favor of strain: 'B73' |
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| GRMZM2G354338 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.351434 x 10-1 | 38 | 23 | 35 | 30 | 62.30% | 46.15% | 61 | 65 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0547881' χ2 p-value for Mo17 x B73: '.5351434' Biased in favor of strain: '' |
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| GRMZM2G354338 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.64 x 10-8 | 132 | 1 | 74 | 60 | 99.25% | 44.78% | 133 | 134 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.58e-15' χ2 p-value for Mo17 x B73: '7.64e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G354253 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 21 | 1 | 100.00% | 4.55% | 5 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.0000201' Biased in favor of strain: '' |
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| GRMZM2G354253 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G354220 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 1 | 3 | 100.00% | 75.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G354220 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 6 | 2 | 22 | 0.00% | 91.67% | 6 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.0093748' Biased in favor of strain: '' |
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| GRMZM2G354093 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.56 x 10-5 | 112 | 56 | 153 | 66 | 66.67% | 30.14% | 168 | 219 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000156' χ2 p-value for Mo17 x B73: '4.13e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G354093 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.929803 x 10-1 | 27 | 10 | 8 | 20 | 72.97% | 71.43% | 37 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4158126' χ2 p-value for Mo17 x B73: '.5929803' Biased in favor of strain: '' |
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| GRMZM2G354053 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.85 x 10-17 | 618 | 216 | 424 | 211 | 74.10% | 33.23% | 834 | 635 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.85e-17' Biased in favor of strain: 'B73' |
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| GRMZM2G354053 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.48 x 10-17 | 383 | 66 | 245 | 182 | 85.30% | 42.62% | 449 | 427 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.48e-17' χ2 p-value for Mo17 x B73: '5.68e-26' Biased in favor of strain: 'B73' |
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| GRMZM2G354013 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 9 | 23 | 9 | 9 | 28.12% | 50.00% | 32 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0133283' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G354013 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 3 | 5 | 3 | 70.00% | 37.50% | 10 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8230743' χ2 p-value for Mo17 x B73: '.0801183' Biased in favor of strain: '' |
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| GRMZM2G353895 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 25 | 25 | 11 | 22 | 50.00% | 66.67% | 50 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0555111' Biased in favor of strain: '' |
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| GRMZM2G353895 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.753082 x 10-1 | 13 | 27 | 11 | 35 | 32.50% | 76.09% | 40 | 46 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.56e-06' χ2 p-value for Mo17 x B73: '.1753082' Biased in favor of strain: '' |
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| GRMZM2G353788 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 21 | 1 | 6 | 32.26% | 85.71% | 31 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0481935' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: '' |
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| GRMZM2G353788 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 0 | 0 | 0.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G353785 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.110798 x 10-1 | 21 | 16 | 16 | 28 | 56.76% | 63.64% | 37 | 44 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4110798' χ2 p-value for Mo17 x B73: '.0704404' Biased in favor of strain: '' |
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| GRMZM2G353785 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.711317 x 10-1 | 6 | 5 | 6 | 13 | 54.55% | 68.42% | 11 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3937584' χ2 p-value for Mo17 x B73: '.8711317' Biased in favor of strain: '' |
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| GRMZM2G353779 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5815 x 10-3 | 192 | 92 | 129 | 83 | 67.61% | 39.15% | 284 | 212 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.96e-09' χ2 p-value for Mo17 x B73: '.0015815' Biased in favor of strain: 'B73' |
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| GRMZM2G353779 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.626704 x 10-1 | 202 | 90 | 108 | 164 | 69.18% | 60.29% | 292 | 272 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3626704' χ2 p-value for Mo17 x B73: '.0257818' Biased in favor of strain: '' |