| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT3G47140 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G47140 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT3G47130 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 5 | 2 | 1 | 3 | 71.43% | 75.00% | 7 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.710382' Avg. expression score for this sample: '3.2453' Avg. expression score in LCM sample: '1.36691' Tissue used: 'full endosperm' |
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| AT3G47130 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.0 x 10-5 | 0 | 32 | 0.00% | 32 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G47130 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.268567' Avg. embryo expression (LCM): '0' |
||||||
| AT3G47130 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G47130 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.25 x 10-4 | 22 | 0 | 100.00% | 22 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G47130 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.42857 x 10-1 | 0 | 0 | 4 | 0 | 0.00% | 0 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.710382' Avg. expression score for this sample: '1.20493' Avg. expression score in LCM sample: '1.36691' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT3G47120 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.44991 x 10-1 | 1648 | 411 | 904 | 1105 | 80.04% | 55.00% | 2059 | 2009 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '2.4e-10' Avg. expression score for this sample: '1343.48' Avg. expression score in LCM sample: '245.338' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G47120 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.9 x 10-9 | 354 | 70 | 83.49% | 424 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G47120 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.3 x 10-14 | 3650 | 1968 | 64.97% | 5618 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G47120 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.6 x 10-14 | 2007 | 485 | 870 | 1773 | 80.54% | 67.08% | 2492 | 2643 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '2.4e-10' Avg. expression score for this sample: '1061.3' Avg. expression score in LCM sample: '245.338' Tissue used: 'full endosperm' |
|||||
| AT3G47120 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.7 x 10-9 | 1646 | 1107 | 393 | 343 | 59.79% | 46.60% | 2753 | 736 | TAIR8 |
Avg. embryo expression (dissected): '1751.77' Avg. embryo expression (LCM): '922.578' |
||||
| AT3G47120 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 6077 | 798 | 88.39% | 6875 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G47110 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.3 x 10-6 | 68 | 4 | 94.44% | 72 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G47110 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.20031 x 10-1 | 10 | 1 | 9 | 19 | 90.91% | 67.86% | 11 | 28 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '4.88407' Avg. expression score in LCM sample: '.955364' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G47110 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.16051 x 10-1 | 27 | 11 | 2 | 1 | 71.05% | 33.33% | 38 | 3 | TAIR8 |
Avg. embryo expression (dissected): '6.92629' Avg. embryo expression (LCM): '7.7612' |
||||
| AT3G47110 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.88514 x 10-1 | 13 | 3 | 81.25% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G47110 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G47110 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.64356 x 10-1 | 32 | 13 | 14 | 17 | 71.11% | 54.84% | 45 | 31 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '7.28162' Avg. expression score in LCM sample: '.955364' Tissue used: 'full endosperm' |
|||||
| AT3G47100 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '3.29828' Avg. expression score in LCM sample: '2.74851' Tissue used: 'full endosperm' |
|||||||
| AT3G47100 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G47100 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '14.5274' Avg. embryo expression (LCM): '7.0328' |
||||||
| AT3G47100 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G47100 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G47100 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.45805' Avg. expression score in LCM sample: '2.74851' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT3G47090 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.427458' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT3G47090 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G47090 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G47090 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.80217' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT3G47090 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.725245' Avg. embryo expression (LCM): '.414433' |
||||||
| AT3G47090 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G47080 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.7 x 10-19 | 273 | 13 | 95.45% | 286 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G47080 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 48 | 8 | 29 | 22 | 85.71% | 43.14% | 56 | 51 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.016928' Avg. expression score for this sample: '132.746' Avg. expression score in LCM sample: '47.9446' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G47080 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.27996 x 10-1 | 37 | 20 | 14 | 8 | 64.91% | 36.36% | 57 | 22 | TAIR8 |
Avg. embryo expression (dissected): '163.873' Avg. embryo expression (LCM): '104.299' |
||||
| AT3G47080 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.31 x 10-4 | 186 | 36 | 83.78% | 222 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G47080 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 25 | 9 | 73.53% | 34 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G47080 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.745 x 10-3 | 213 | 57 | 107 | 247 | 78.89% | 69.77% | 270 | 354 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.016928' Avg. expression score for this sample: '240.008' Avg. expression score in LCM sample: '47.9446' Tissue used: 'full endosperm' |
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| AT3G47070 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.93294 x 10-1 | 22 | 6 | 7 | 18 | 78.57% | 72.00% | 28 | 25 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.635912' Avg. expression score for this sample: '63.9184' Avg. expression score in LCM sample: '8.80405' Tissue used: 'full endosperm' |
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| AT3G47070 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.00439 x 10-1 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G47070 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.27996 x 10-1 | 27 | 35 | 10 | 7 | 43.55% | 41.18% | 62 | 17 | TAIR8 |
Avg. embryo expression (dissected): '80.2374' Avg. embryo expression (LCM): '50.7618' |
||||
| AT3G47070 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.47231 x 10-1 | 5 | 4 | 55.56% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G47070 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.07405 x 10-1 | 9 | 0 | 100.00% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G47070 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 17 | 6 | 8 | 10 | 73.91% | 55.56% | 23 | 18 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.635912' Avg. expression score for this sample: '31.2452' Avg. expression score in LCM sample: '8.80405' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G47060 | ftsh7 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.02786 x 10-1 | 90 | 51 | 35 | 68 | 63.83% | 66.02% | 141 | 103 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '6.6e-07' Avg. expression score for this sample: '52.0672' Avg. expression score in LCM sample: '48.4149' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT3G47060 | ftsh7 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.8745 x 10-2 | 58 | 7 | 89.23% | 65 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G47060 | ftsh7 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.59 x 10-4 | 366 | 56 | 86.73% | 422 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G47060 | ftsh7 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.1 x 10-11 | 211 | 48 | 39 | 241 | 81.47% | 86.07% | 259 | 280 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '6.6e-07' Avg. expression score for this sample: '75.1023' Avg. expression score in LCM sample: '48.4149' Tissue used: 'full endosperm' |
||||
| AT3G47060 | ftsh7 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.66451 x 10-1 | 63 | 76 | 24 | 22 | 45.32% | 47.83% | 139 | 46 | TAIR8 |
Avg. embryo expression (dissected): '61.1921' Avg. embryo expression (LCM): '49.9957' |
|||
| AT3G47060 | ftsh7 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.7 x 10-16 | 518 | 36 | 93.50% | 554 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G47050 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G47050 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G47050 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT3G47050 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.33333 x 10-1 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G47050 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G47050 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 1 | 1 | 0 | 0.00% | 0.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.355557' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT3G47040 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 4 | 0 | 5 | 5 | 100.00% | 50.00% | 4 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '3.74777' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT3G47040 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.76508 x 10-1 | 9 | 2 | 81.82% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G47040 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 3 | 5 | 0 | 1 | 37.50% | 100.00% | 8 | 1 | TAIR8 |
Avg. embryo expression (dissected): '2.61447' Avg. embryo expression (LCM): '2.6373' |
||||
| AT3G47040 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G47040 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.15789 x 10-1 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G47040 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 0 | 3 | 100.00% | 100.00% | 1 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '2.31118' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G47030 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.81141 x 10-1 | 4 | 8 | 3 | 3 | 33.33% | 50.00% | 12 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.035066' Avg. expression score for this sample: '26.9815' Avg. expression score in LCM sample: '6.18782' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G47030 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.1417 x 10-1 | 0 | 2 | 0.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G47030 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0206 x 10-2 | 129 | 73 | 63.86% | 202 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G47030 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.91355 x 10-1 | 1 | 5 | 6 | 7 | 16.67% | 53.85% | 6 | 13 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.035066' Avg. expression score for this sample: '25.6003' Avg. expression score in LCM sample: '6.18782' Tissue used: 'full endosperm' |
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| AT3G47030 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.610773' Avg. embryo expression (LCM): '0' |
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| AT3G47030 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.8241 x 10-2 | 19 | 72 | 20.88% | 91 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G47020 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G47020 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G47020 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT3G47020 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G47020 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G47020 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.192887' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT3G47010 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '10.9421' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT3G47010 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G47010 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '33.114' Avg. embryo expression (LCM): '31.6727' |
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| AT3G47010 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G47010 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G47010 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '8.23888' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G47000 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.62137 x 10-1 | 2 | 0 | 8 | 5 | 100.00% | 38.46% | 2 | 13 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '59.9371' Avg. expression score in LCM sample: '31.4388' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G47000 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G47000 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.565 x 10-3 | 14 | 0 | 100.00% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G47000 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.97226 x 10-1 | 13 | 4 | 6 | 12 | 76.47% | 66.67% | 17 | 18 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '82.6572' Avg. expression score in LCM sample: '31.4388' Tissue used: 'full endosperm' |
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| AT3G47000 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.08392 x 10-1 | 5 | 1 | 1 | 0 | 83.33% | 0.00% | 6 | 1 | TAIR8 |
Avg. embryo expression (dissected): '127.163' Avg. embryo expression (LCM): '127.457' |
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| AT3G47000 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.7 x 10-4 | 49 | 4 | 92.45% | 53 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G46990 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.119 x 10-3 | 23 | 2 | 92.00% | 25 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G46990 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.87875 x 10-1 | 10 | 7 | 2 | 13 | 58.82% | 86.67% | 17 | 15 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.349609' Avg. expression score for this sample: '178.986' Avg. expression score in LCM sample: '55.8227' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G46990 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.08161 x 10-1 | 4 | 12 | 3 | 2 | 25.00% | 40.00% | 16 | 5 | TAIR8 |
Avg. embryo expression (dissected): '283.657' Avg. embryo expression (LCM): '278.336' |
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| AT3G46990 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 1 | 66.67% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G46990 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.83561 x 10-1 | 3 | 3 | 50.00% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G46990 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.70982 x 10-1 | 20 | 18 | 21 | 30 | 52.63% | 58.82% | 38 | 51 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.349609' Avg. expression score for this sample: '257.842' Avg. expression score in LCM sample: '55.8227' Tissue used: 'full endosperm' |
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| AT3G46980 | PHT4;3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.7 x 10-5 | 505 | 116 | 154 | 311 | 81.32% | 66.88% | 621 | 465 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000022' Avg. expression score for this sample: '175.044' Avg. expression score in LCM sample: '159.737' Tissue used: 'full endosperm' |
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| AT3G46980 | PHT4;3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.165 x 10-3 | 277 | 137 | 66.91% | 414 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G46980 | PHT4;3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.8422 x 10-2 | 166 | 84 | 48 | 20 | 66.40% | 29.41% | 250 | 68 | TAIR8 |
Avg. embryo expression (dissected): '109.109' Avg. embryo expression (LCM): '77.7125' |
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| AT3G46980 | PHT4;3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.41248 x 10-1 | 70 | 21 | 76.92% | 91 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G46980 | PHT4;3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 698 | 25 | 96.54% | 723 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G46980 | PHT4;3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.56585 x 10-1 | 234 | 41 | 114 | 131 | 85.09% | 53.47% | 275 | 245 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000022' Avg. expression score for this sample: '125.273' Avg. expression score in LCM sample: '159.737' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G46970 | PHS2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0121 x 10-2 | 162 | 46 | 77.88% | 208 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G46970 | PHS2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 447 | 12 | 97.39% | 459 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |