Displaying data sets 75501 - 75600 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G47500 CDF3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.11091 x 10-1 104 52 19 79 66.67% 80.61% 156 98 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.587853'
Avg. expression score for this sample: '70.5054'
Avg. expression score in LCM sample: '24.0017'
Tissue used: 'full endosperm'
AT3G47500 CDF3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.01586 x 10-1 40 17 31 40 70.18% 56.34% 57 71 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.587853'
Avg. expression score for this sample: '45.6482'
Avg. expression score in LCM sample: '24.0017'
Tissue used: 'pure endosperm, no chalazal'
AT3G47500 CDF3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3 x 10-5 136 22 86.08% 158 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47500 CDF3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1334 x 10-2 127 34 78.88% 161 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47490 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.47527 x 10-1 51 15 77.27% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47490 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.49212 x 10-1 64 36 64.00% 100 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.20195 x 10-1 10 3 2 10 76.92% 83.33% 13 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.240186'
Avg. expression score for this sample: '11.3653'
Avg. expression score in LCM sample: '3.32173'
Tissue used: 'pure endosperm, no chalazal'
AT3G47490 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.91329 x 10-1 9 15 1 2 37.50% 66.67% 24 3 TAIR8 Avg. embryo expression (dissected): '16.7956'
Avg. embryo expression (LCM): '21.2617'
AT3G47490 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.61905 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.86139 x 10-1 11 10 6 31 52.38% 83.78% 21 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.240186'
Avg. expression score for this sample: '14.8968'
Avg. expression score in LCM sample: '3.32173'
Tissue used: 'full endosperm'
AT3G47480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.05106'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G47480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G47480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 6 3 66.67% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G47470 LHCA4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.0629 x 10-2 796 567 299 186 58.40% 38.35% 1363 485 TAIR8 Avg. embryo expression (dissected): '4711.96'
Avg. embryo expression (LCM): '2215.17'
AT3G47470 LHCA4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.8056 x 10-2 135 87 60.81% 222 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47470 LHCA4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 981 401 409 643 70.98% 61.12% 1382 1052 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.547801'
Avg. expression score for this sample: '2244.84'
Avg. expression score in LCM sample: '952.689'
Tissue used: 'full endosperm'
AT3G47470 LHCA4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.30952 x 10-1 144 87 62.34% 231 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47470 LHCA4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.24127 x 10-1 92 53 63.45% 145 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47470 LHCA4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.73703 x 10-1 879 299 274 345 74.62% 55.74% 1178 619 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.547801'
Avg. expression score for this sample: '2853.34'
Avg. expression score in LCM sample: '952.689'
Tissue used: 'pure endosperm, no chalazal'
AT3G47460 ATSMC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.29805 x 10-1 144 78 68 98 64.86% 59.04% 222 166 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.534247'
Avg. expression score for this sample: '87.8882'
Avg. expression score in LCM sample: '59.3796'
Tissue used: 'pure endosperm, no chalazal'
AT3G47460 ATSMC2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.6687 x 10-2 23 22 51.11% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47460 ATSMC2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.22313 x 10-1 97 37 72.39% 134 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47460 ATSMC2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.36413 x 10-1 32 14 69.57% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47460 ATSMC2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.51276 x 10-1 204 188 71 48 52.04% 40.34% 392 119 TAIR8 Avg. embryo expression (dissected): '190.094'
Avg. embryo expression (LCM): '184.674'
AT3G47460 ATSMC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 190 90 156 306 67.86% 66.23% 280 462 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.534247'
Avg. expression score for this sample: '113.838'
Avg. expression score in LCM sample: '59.3796'
Tissue used: 'full endosperm'
AT3G47450 NOA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 18 6 12 15 75.00% 55.56% 24 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.52639'
Avg. expression score for this sample: '27.0232'
Avg. expression score in LCM sample: '3.86555'
Tissue used: 'full endosperm'
AT3G47450 NOA1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 19 11 63.33% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47450 NOA1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.56274 x 10-1 19 9 67.86% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47450 NOA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.15438 x 10-1 15 7 7 5 68.18% 41.67% 22 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.52639'
Avg. expression score for this sample: '20.797'
Avg. expression score in LCM sample: '3.86555'
Tissue used: 'pure endosperm, no chalazal'
AT3G47450 NOA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.30801 x 10-1 20 12 9 10 62.50% 52.63% 32 19 TAIR8 Avg. embryo expression (dissected): '65.3941'
Avg. embryo expression (LCM): '36.3948'
AT3G47450 NOA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.1362 x 10-2 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47440 TIP5;1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47440 TIP5;1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '2.73777'
Avg. embryo expression (LCM): '0'
AT3G47440 TIP5;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.44566'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G47440 TIP5;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 2 6 0.00% 75.00% 1 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.78325'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G47440 TIP5;1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.54545 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47440 TIP5;1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.54545 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47430 PEX11B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47430 PEX11B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47430 PEX11B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.297156'
Avg. embryo expression (LCM): '1.28097'
AT3G47430 PEX11B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47430 PEX11B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G47430 PEX11B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G47420 G3Pp1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 24 19 14 40 55.81% 74.07% 43 54 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.02425'
Avg. expression score for this sample: '37.738'
Avg. expression score in LCM sample: '14.6097'
Tissue used: 'pure endosperm, no chalazal'
AT3G47420 G3Pp1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.817 x 10-3 58 7 34 103 89.23% 75.18% 65 137 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.02425'
Avg. expression score for this sample: '47.0293'
Avg. expression score in LCM sample: '14.6097'
Tissue used: 'full endosperm'
AT3G47420 G3Pp1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.98 x 10-4 200 123 61.92% 323 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47420 G3Pp1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.65975 x 10-1 148 37 80.00% 185 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47420 G3Pp1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.9079 x 10-2 17 14 54.84% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47420 G3Pp1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.77512 x 10-1 12 11 0 2 52.17% 100.00% 23 2 TAIR8 Avg. embryo expression (dissected): '11.5491'
Avg. embryo expression (LCM): '3.74246'
AT3G47410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '8.21671'
Avg. embryo expression (LCM): '0'
AT3G47410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.375 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 0 1 50.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '310.31'
Avg. expression score in LCM sample: '86.2033'
Tissue used: 'full endosperm'
AT3G47410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 1 0 100.00% 0.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '359.904'
Avg. expression score in LCM sample: '86.2033'
Tissue used: 'pure endosperm, no chalazal'
AT3G47410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47400 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.283102'
Avg. embryo expression (LCM): '0'
AT3G47400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.375058'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G47400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.352858'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G47390 PHS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.88168 x 10-1 3 3 3 4 50.00% 57.14% 6 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.536507'
Avg. expression score for this sample: '33.3171'
Avg. expression score in LCM sample: '24.619'
Tissue used: 'full endosperm'
AT3G47390 PHS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 2 2 4 33.33% 66.67% 3 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.536507'
Avg. expression score for this sample: '39.2661'
Avg. expression score in LCM sample: '24.619'
Tissue used: 'pure endosperm, no chalazal'
AT3G47390 PHS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.72984 x 10-1 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47390 PHS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.02053 x 10-1 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47390 PHS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.37186 x 10-1 5 0 3 1 100.00% 25.00% 5 4 TAIR8 Avg. embryo expression (dissected): '68.3075'
Avg. embryo expression (LCM): '48.3882'
AT3G47390 PHS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.18481 x 10-1 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47380 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47380 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G47380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G47380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.916014'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G47380 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47380 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.42857 x 10-1 0 6 0.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.9 x 10-9 672 183 78.60% 855 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.9 x 10-7 862 265 76.49% 1127 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.8363 x 10-2 461 227 321 798 67.01% 71.31% 688 1119 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.102872'
Avg. expression score for this sample: '663.243'
Avg. expression score in LCM sample: '324.001'
Tissue used: 'full endosperm'
AT3G47370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.18243 x 10-1 887 801 113 105 52.55% 48.17% 1688 218 TAIR8 Avg. embryo expression (dissected): '1460.91'
Avg. embryo expression (LCM): '2403.55'
AT3G47370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.8248 x 10-2 217 129 62.72% 346 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.61274 x 10-1 426 164 225 368 72.20% 62.06% 590 593 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.102872'
Avg. expression score for this sample: '694.44'
Avg. expression score in LCM sample: '324.001'
Tissue used: 'pure endosperm, no chalazal'
AT3G47360 HSD3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.44444 x 10-1 5 0 0 0 100.00% 5 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.447032'
Avg. expression score for this sample: '4.16258'
Avg. expression score in LCM sample: '1.58737'
Tissue used: 'pure endosperm, no chalazal'
AT3G47360 HSD3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.77617 x 10-1 11 0 3 0 100.00% 0.00% 11 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.447032'
Avg. expression score for this sample: '8.72182'
Avg. expression score in LCM sample: '1.58737'
Tissue used: 'full endosperm'
AT3G47360 HSD3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 17 3 85.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47360 HSD3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47360 HSD3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47360 HSD3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 3 0 100.00% 0.00% 1 3 TAIR8 Avg. embryo expression (dissected): '5.2448'
Avg. embryo expression (LCM): '0'
AT3G47350 HSD2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '.819345'
Avg. embryo expression (LCM): '0'
AT3G47350 HSD2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47350 HSD2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 2 0 100.00% 0.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.972567'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G47350 HSD2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47350 HSD2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 1 1 2 80.00% 66.67% 5 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.94686'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G47350 HSD2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.6087 x 10-2 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47348 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47348 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47348 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8.45135'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G47348 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47348 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '8.86237'
Avg. embryo expression (LCM): '0'
AT3G47348 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.10126'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'