Displaying data sets 75301 - 75400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G47810 MAG1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.1 x 10-5 214 41 83.92% 255 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47810 MAG1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.03607 x 10-1 953 356 72.80% 1309 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47810 MAG1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 2138 237 90.02% 2375 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47810 MAG1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.8 x 10-9 205 730 80 308 21.93% 79.38% 935 388 TAIR8 Avg. embryo expression (dissected): '920.126'
Avg. embryo expression (LCM): '406.622'
AT3G47810 MAG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.7995 x 10-2 380 385 158 855 49.67% 84.40% 765 1013 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.8e-08'
Avg. expression score for this sample: '804.546'
Avg. expression score in LCM sample: '303.791'
Tissue used: 'pure endosperm, no chalazal'
AT3G47810 MAG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.3 x 10-9 457 378 216 1290 54.73% 85.66% 835 1506 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.8e-08'
Avg. expression score for this sample: '698.599'
Avg. expression score in LCM sample: '303.791'
Tissue used: 'full endosperm'
AT3G47800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.92317 x 10-1 6 5 11 8 54.55% 42.11% 11 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.36787'
Avg. expression score for this sample: '9.9179'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G47800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 3 0 2 66.67% 100.00% 9 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.36787'
Avg. expression score for this sample: '7.68773'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G47800 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.49796 x 10-1 338 328 50.75% 666 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47800 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.72808 x 10-1 36 22 15 5 62.07% 25.00% 58 20 TAIR8 Avg. embryo expression (dissected): '50.956'
Avg. embryo expression (LCM): '47.1323'
AT3G47800 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.071 x 10-3 813 237 77.43% 1050 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47800 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.66649 x 10-1 8 2 80.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47790 ABCA8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.32143 x 10-1 25 1 96.15% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47790 ABCA8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47790 ABCA8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.253038'
Avg. embryo expression (LCM): '0'
AT3G47790 ABCA8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 22 0 100.00% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47790 ABCA8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.2e-10'
Avg. expression score for this sample: '1.7612'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G47790 ABCA8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.2 x 10-10 14 0 0 72 100.00% 100.00% 14 72 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.2e-10'
Avg. expression score for this sample: '60.8485'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G47780 ABCA7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.616 x 10-2 14 4 7 33 77.78% 82.50% 18 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.074327'
Avg. expression score for this sample: '4.15181'
Avg. expression score in LCM sample: '1.54328'
Tissue used: 'full endosperm'
AT3G47780 ABCA7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.46917 x 10-1 176 61 74.26% 237 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47780 ABCA7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.6 x 10-6 4 16 20.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47780 ABCA7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 3 2 10 57.14% 83.33% 7 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.074327'
Avg. expression score for this sample: '1.99376'
Avg. expression score in LCM sample: '1.54328'
Tissue used: 'pure endosperm, no chalazal'
AT3G47780 ABCA7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.39608 x 10-1 80 32 71.43% 112 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47780 ABCA7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.35052 x 10-1 3 13 0 0 18.75% 16 0 TAIR8 Avg. embryo expression (dissected): '1.42414'
Avg. embryo expression (LCM): '.8791'
AT3G47770 ABCA6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G47770 ABCA6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47770 ABCA6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G47770 ABCA6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.06731'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G47770 ABCA6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47770 ABCA6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47760 ABCA5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47760 ABCA5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47760 ABCA5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G47760 ABCA5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47760 ABCA5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '.96701'
AT3G47760 ABCA5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.342105'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G47750 ABCA4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 0 3 1 100.00% 25.00% 4 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.8142'
Avg. expression score in LCM sample: '.514427'
Tissue used: 'full endosperm'
AT3G47750 ABCA4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47750 ABCA4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47750 ABCA4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.96107 x 10-1 9 14 3 4 39.13% 57.14% 23 7 TAIR8 Avg. embryo expression (dissected): '12.7593'
Avg. embryo expression (LCM): '6.6686'
AT3G47750 ABCA4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.50749 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47750 ABCA4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.18298'
Avg. expression score in LCM sample: '.514427'
Tissue used: 'pure endosperm, no chalazal'
AT3G47740 ABCA3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G47740 ABCA3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47740 ABCA3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G47740 ABCA3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.063977'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G47740 ABCA3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47740 ABCA3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47730 ABCA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 10 5 66.67% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47730 ABCA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.9 x 10-9 206 24 89.57% 230 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47730 ABCA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.85732 x 10-1 52 38 13 7 57.78% 35.00% 90 20 TAIR8 Avg. embryo expression (dissected): '71.563'
Avg. embryo expression (LCM): '39.3711'
AT3G47730 ABCA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.115 x 10-2 110 28 79.71% 138 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47730 ABCA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.37358 x 10-1 43 9 19 27 82.69% 58.70% 52 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.597905'
Avg. expression score for this sample: '42.0066'
Avg. expression score in LCM sample: '29.5281'
Tissue used: 'pure endosperm, no chalazal'
AT3G47730 ABCA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.14807 x 10-1 71 19 45 63 78.89% 58.33% 90 108 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.597905'
Avg. expression score for this sample: '72.8121'
Avg. expression score in LCM sample: '29.5281'
Tissue used: 'full endosperm'
AT3G47720 SRO4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.61433'
Avg. expression score in LCM sample: '1.24932'
Tissue used: 'full endosperm'
AT3G47720 SRO4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47720 SRO4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47720 SRO4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.222084'
Avg. expression score in LCM sample: '1.24932'
Tissue used: 'pure endosperm, no chalazal'
AT3G47720 SRO4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47720 SRO4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G47710 BNQ3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G47710 BNQ3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47710 BNQ3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G47710 BNQ3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G47710 BNQ3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47710 BNQ3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47700 MAG2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.6123 x 10-2 61 5 92.42% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47700 MAG2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47700 MAG2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.05438 x 10-1 11 8 3 16 57.89% 84.21% 19 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.011579'
Avg. expression score for this sample: '54.1205'
Avg. expression score in LCM sample: '34.4519'
Tissue used: 'pure endosperm, no chalazal'
AT3G47700 MAG2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.24026 x 10-1 82 24 77.36% 106 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47700 MAG2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 7 0 3 22.22% 100.00% 9 3 TAIR8 Avg. embryo expression (dissected): '37.1982'
Avg. embryo expression (LCM): '44.4071'
AT3G47700 MAG2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.761 x 10-3 45 9 5 33 83.33% 86.84% 54 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.011579'
Avg. expression score for this sample: '67.0004'
Avg. expression score in LCM sample: '34.4519'
Tissue used: 'full endosperm'
AT3G47690 EB1a endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 6 7 8 20 46.15% 71.43% 13 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.585844'
Avg. expression score for this sample: '36.433'
Avg. expression score in LCM sample: '20.048'
Tissue used: 'full endosperm'
AT3G47690 EB1a endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47690 EB1a endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 12 8 60.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47690 EB1a embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 6 0 4 40.00% 100.00% 10 4 TAIR8 Avg. embryo expression (dissected): '32.4219'
Avg. embryo expression (LCM): '44.7211'
AT3G47690 EB1a endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1944 x 10-2 22 3 88.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47690 EB1a endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.55643 x 10-1 3 7 4 10 30.00% 71.43% 10 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.585844'
Avg. expression score for this sample: '38.8123'
Avg. expression score in LCM sample: '20.048'
Tissue used: 'pure endosperm, no chalazal'
AT3G47680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '63.6664'
Avg. expression score in LCM sample: '11.3321'
Tissue used: 'pure endosperm, no chalazal'
AT3G47680 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '83.348'
Avg. expression score in LCM sample: '11.3321'
Tissue used: 'full endosperm'
AT3G47680 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '51.995'
Avg. embryo expression (LCM): '27.6665'
AT3G47680 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47675 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47675 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47675 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47675 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '101.812'
Avg. expression score in LCM sample: '20.6947'
Tissue used: 'pure endosperm, no chalazal'
AT3G47675 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '95.3074'
Avg. embryo expression (LCM): '35.3775'
AT3G47675 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '218.863'
Avg. expression score in LCM sample: '20.6947'
Tissue used: 'full endosperm'
AT3G47670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.84078 x 10-1 8 1 3 9 88.89% 75.00% 9 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.753614'
Avg. expression score for this sample: '47.9213'
Avg. expression score in LCM sample: '10.7442'
Tissue used: 'full endosperm'
AT3G47670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '18.5799'
Avg. embryo expression (LCM): '14.907'
AT3G47670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 18 6 75.00% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 1 0 66.67% 0.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.753614'
Avg. expression score for this sample: '21.6855'
Avg. expression score in LCM sample: '10.7442'
Tissue used: 'pure endosperm, no chalazal'
AT3G47670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 18 5 78.26% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.75486 x 10-1 18 10 64.29% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 4 2 9 20.00% 81.82% 5 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.586439'
Avg. expression score for this sample: '4.54331'
Avg. expression score in LCM sample: '.514427'
Tissue used: 'pure endosperm, no chalazal'
AT3G47660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.81251 x 10-1 7 11 4 4 38.89% 50.00% 18 8 TAIR8 Avg. embryo expression (dissected): '6.71761'
Avg. embryo expression (LCM): '2.64986'
AT3G47660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.29223 x 10-1 27 13 1 14 67.50% 93.33% 40 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.586439'
Avg. expression score for this sample: '7.41933'
Avg. expression score in LCM sample: '.514427'
Tissue used: 'full endosperm'