Displaying data sets 75101 - 75200 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G48131 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G48131 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G48120 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.88663 x 10-1 38 50 3 11 43.18% 78.57% 88 14 TAIR8 Avg. embryo expression (dissected): '718.547'
Avg. embryo expression (LCM): '370.34'
AT3G48120 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.3195 x 10-2 95 22 81.20% 117 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.1897 x 10-1 50 38 17 69 56.82% 80.23% 88 86 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.176524'
Avg. expression score for this sample: '1161.44'
Avg. expression score in LCM sample: '251.819'
Tissue used: 'pure endosperm, no chalazal'
AT3G48120 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.72591 x 10-1 10 5 66.67% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48120 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.6849 x 10-2 115 27 80.99% 142 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.35368 x 10-1 69 35 29 108 66.35% 78.83% 104 137 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.176524'
Avg. expression score for this sample: '742.831'
Avg. expression score in LCM sample: '251.819'
Tissue used: 'full endosperm'
AT3G48115 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.3274 x 10-2 108 25 27 46 81.20% 63.01% 133 73 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.02046'
Avg. expression score for this sample: '433.519'
Avg. expression score in LCM sample: '157.473'
Tissue used: 'full endosperm'
AT3G48115 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.59151 x 10-1 75 17 13 18 81.52% 58.06% 92 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.02046'
Avg. expression score for this sample: '379.832'
Avg. expression score in LCM sample: '157.473'
Tissue used: 'pure endosperm, no chalazal'
AT3G48115 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.54117 x 10-1 17 18 5 0 48.57% 0.00% 35 5 TAIR8 Avg. embryo expression (dissected): '158.367'
Avg. embryo expression (LCM): '134.553'
AT3G48115 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.02955 x 10-1 29 11 72.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48115 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.4176 x 10-2 57 9 86.36% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48115 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.4008 x 10-2 11 9 55.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48110 EDD1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.3213 x 10-2 27 4 87.10% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48110 EDD1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.9 x 10-10 81 3 96.43% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48110 EDD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.78081 x 10-1 30 30 29 67 50.00% 69.79% 60 96 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.689281'
Avg. expression score for this sample: '26.5764'
Avg. expression score in LCM sample: '13.1546'
Tissue used: 'full endosperm'
AT3G48110 EDD1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.38476 x 10-1 41 18 69.49% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48110 EDD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.51385 x 10-1 22 15 5 23 59.46% 82.14% 37 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.689281'
Avg. expression score for this sample: '21.3959'
Avg. expression score in LCM sample: '13.1546'
Tissue used: 'pure endosperm, no chalazal'
AT3G48110 EDD1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.54448 x 10-1 71 83 12 17 46.10% 58.62% 154 29 TAIR8 Avg. embryo expression (dissected): '77.3529'
Avg. embryo expression (LCM): '92.833'
AT3G48100 RR5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.424136'
Avg. embryo expression (LCM): '1.83355'
AT3G48100 RR5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48100 RR5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G48100 RR5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48100 RR5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48100 RR5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.386402'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G48090 EDS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.27386 x 10-1 16 2 0 2 88.89% 100.00% 18 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.130014'
Avg. expression score for this sample: '3.7553'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G48090 EDS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.130014'
Avg. expression score for this sample: '1.32494'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G48090 EDS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.49917 x 10-1 7 2 1 0 77.78% 0.00% 9 1 TAIR8 Avg. embryo expression (dissected): '1.98046'
Avg. embryo expression (LCM): '0'
AT3G48090 EDS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.4789 x 10-2 11 9 55.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48090 EDS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48090 EDS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.58587 x 10-1 28 7 80.00% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48080 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.43081 x 10-1 14 4 77.78% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48080 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.88877 x 10-1 11 13 2 3 45.83% 60.00% 24 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.481761'
Avg. expression score for this sample: '8.43308'
Avg. expression score in LCM sample: '.7055'
Tissue used: 'full endosperm'
AT3G48080 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.50777 x 10-1 11 4 73.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 1 6 50.00% 85.71% 2 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.481761'
Avg. expression score for this sample: '2.09721'
Avg. expression score in LCM sample: '.7055'
Tissue used: 'pure endosperm, no chalazal'
AT3G48080 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 5.2381 x 10-1 4 1 0 0 80.00% 5 0 TAIR8 Avg. embryo expression (dissected): '2.37022'
Avg. embryo expression (LCM): '4.19456'
AT3G48070 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.343 x 10-2 59 23 13 3 71.95% 18.75% 82 16 TAIR8 Avg. embryo expression (dissected): '356.422'
Avg. embryo expression (LCM): '100.506'
AT3G48070 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.22817 x 10-1 154 36 81.05% 190 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.80269 x 10-1 78 19 23 38 80.41% 62.30% 97 61 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.7e-06'
Avg. expression score for this sample: '392.114'
Avg. expression score in LCM sample: '76.2234'
Tissue used: 'pure endosperm, no chalazal'
AT3G48070 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.41403 x 10-1 28 12 70.00% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48070 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.4 x 10-12 298 17 94.60% 315 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.7 x 10-6 193 35 71 221 84.65% 75.68% 228 292 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.7e-06'
Avg. expression score for this sample: '543.364'
Avg. expression score in LCM sample: '76.2234'
Tissue used: 'full endosperm'
AT3G48060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.0604 x 10-2 743 329 291 683 69.31% 70.12% 1072 974 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.204637'
Avg. expression score for this sample: '388.82'
Avg. expression score in LCM sample: '253.936'
Tissue used: 'full endosperm'
AT3G48060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.54831 x 10-1 303 210 164 403 59.06% 71.08% 513 567 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.204637'
Avg. expression score for this sample: '362.997'
Avg. expression score in LCM sample: '253.936'
Tissue used: 'pure endosperm, no chalazal'
AT3G48060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.25041 x 10-1 223 213 71 75 51.15% 51.37% 436 146 TAIR8 Avg. embryo expression (dissected): '346.421'
Avg. embryo expression (LCM): '215.744'
AT3G48060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2 x 10-16 595 120 83.22% 715 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-9 517 130 79.91% 647 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.86986 x 10-1 129 74 63.55% 203 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48057 MIR843A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48057 MIR843A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48057 MIR843A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.91829'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G48057 MIR843A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48057 MIR843A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.40887'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G48057 MIR843A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G48050 SUO embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.95021 x 10-1 21 76 8 40 21.65% 83.33% 97 48 TAIR8 Avg. embryo expression (dissected): '325.257'
Avg. embryo expression (LCM): '223.982'
AT3G48050 SUO endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.2 x 10-22 312 41 88.39% 353 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48050 SUO endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.85 x 10-4 190 185 50.67% 375 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48050 SUO endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0547 x 10-2 25 80 19 93 23.81% 83.04% 105 112 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.02577'
Avg. expression score for this sample: '299.318'
Avg. expression score in LCM sample: '240.678'
Tissue used: 'pure endosperm, no chalazal'
AT3G48050 SUO endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.2 x 10-5 42 4 91.30% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48050 SUO endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.28257 x 10-1 113 158 56 263 41.70% 82.45% 271 319 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.02577'
Avg. expression score for this sample: '388.431'
Avg. expression score in LCM sample: '240.678'
Tissue used: 'full endosperm'
AT3G48040 ROP10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.0376 x 10-2 40 15 10 54 72.73% 84.38% 55 64 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.201787'
Avg. expression score for this sample: '46.0873'
Avg. expression score in LCM sample: '20.0921'
Tissue used: 'full endosperm'
AT3G48040 ROP10 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.4915 x 10-2 16 41 4 8 28.07% 66.67% 57 12 TAIR8 Avg. embryo expression (dissected): '49.1583'
Avg. embryo expression (LCM): '50.1841'
AT3G48040 ROP10 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.508 x 10-3 7 11 38.89% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48040 ROP10 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.87687 x 10-1 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48040 ROP10 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8829 x 10-2 12 13 48.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48040 ROP10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.75442 x 10-1 17 23 9 41 42.50% 82.00% 40 50 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.201787'
Avg. expression score for this sample: '46.2407'
Avg. expression score in LCM sample: '20.0921'
Tissue used: 'pure endosperm, no chalazal'
AT3G48030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.68105 x 10-1 39 14 11 40 73.58% 78.43% 53 51 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.050828'
Avg. expression score for this sample: '122.169'
Avg. expression score in LCM sample: '51.9424'
Tissue used: 'pure endosperm, no chalazal'
AT3G48030 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 9 2 81.82% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48030 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.053 x 10-3 48 2 96.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48030 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 28 36 1 8 43.75% 88.89% 64 9 TAIR8 Avg. embryo expression (dissected): '142.919'
Avg. embryo expression (LCM): '62.3785'
AT3G48030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.26059 x 10-1 37 10 9 27 78.72% 75.00% 47 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.050828'
Avg. expression score for this sample: '88.4797'
Avg. expression score in LCM sample: '51.9424'
Tissue used: 'full endosperm'
AT3G48030 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.42195 x 10-1 33 9 78.57% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48020 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48020 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.31677'
Avg. expression score for this sample: '4.66599'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G48020 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.1677 x 10-1 11 0 1 0 100.00% 0.00% 11 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.31677'
Avg. expression score for this sample: '8.53901'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G48020 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.2244'
Avg. embryo expression (LCM): '0'
AT3G48010 CNGC16 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '.825168'
Avg. embryo expression (LCM): '0'
AT3G48010 CNGC16 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.0226 x 10-2 9 0 0 2 100.00% 100.00% 9 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.92551'
Avg. expression score in LCM sample: '.690802'
Tissue used: 'full endosperm'
AT3G48010 CNGC16 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48010 CNGC16 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48010 CNGC16 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.80702 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48010 CNGC16 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.42857 x 10-1 0 1 3 0 0.00% 0.00% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.10482'
Avg. expression score in LCM sample: '.690802'
Tissue used: 'pure endosperm, no chalazal'
AT3G48000 ALDH2B4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.02562 x 10-1 7 5 4 19 58.33% 82.61% 12 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000024'
Avg. expression score for this sample: '958.693'
Avg. expression score in LCM sample: '390.626'
Tissue used: 'pure endosperm, no chalazal'
AT3G48000 ALDH2B4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.01059 x 10-1 55 7 88.71% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48000 ALDH2B4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.14621 x 10-1 68 10 87.18% 78 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48000 ALDH2B4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.6 x 10-5 52 29 19 175 64.20% 90.21% 81 194 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000024'
Avg. expression score for this sample: '1496.81'
Avg. expression score in LCM sample: '390.626'
Tissue used: 'full endosperm'
AT3G48000 ALDH2B4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.91329 x 10-1 6 16 0 5 27.27% 100.00% 22 5 TAIR8 Avg. embryo expression (dissected): '959.83'
Avg. embryo expression (LCM): '626.045'
AT3G48000 ALDH2B4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.32 x 10-4 172 14 92.47% 186 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47990 SIS3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 16 6 72.73% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47990 SIS3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 14 6 70.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47990 SIS3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 3 100.00% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '202.029'
Avg. expression score in LCM sample: '129.209'
Tissue used: 'pure endosperm, no chalazal'
AT3G47990 SIS3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G47990 SIS3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 5.2381 x 10-1 1 4 0 0 20.00% 5 0 TAIR8 Avg. embryo expression (dissected): '180.269'
Avg. embryo expression (LCM): '112.023'
AT3G47990 SIS3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 2 3 7 50.00% 70.00% 4 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '237.819'
Avg. expression score in LCM sample: '129.209'
Tissue used: 'full endosperm'
AT3G47980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.318733'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G47980 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.265862'
Avg. embryo expression (LCM): '0'