| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G359331 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.73 x 10-7 | 43 | 7 | 33 | 3 | 86.00% | 8.33% | 50 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.56e-07' χ2 p-value for Mo17 x B73: '5.73e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G359331 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.624131 x 10-1 | 32 | 2 | 14 | 17 | 94.12% | 54.84% | 34 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0006851' χ2 p-value for Mo17 x B73: '.1624131' Biased in favor of strain: '' |
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| GRMZM2G359322 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 55 | 40 | 49 | 49 | 57.89% | 50.00% | 95 | 98 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1238122' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G359322 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.630244 x 10-1 | 9 | 2 | 8 | 14 | 81.82% | 63.64% | 11 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2864275' χ2 p-value for Mo17 x B73: '.7630244' Biased in favor of strain: '' |
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| GRMZM2G359305 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 4 | 100.00% | 0 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G359305 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 4 | 100.00% | 0 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G359304 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 2 | 2 | 100.00% | 50.00% | 1 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G359304 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G359298 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.022 x 10-4 | 11 | 35 | 14 | 50 | 23.91% | 78.12% | 46 | 64 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004022' χ2 p-value for Mo17 x B73: '6.80e-06' Biased in favor of strain: 'Mo17' |
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| GRMZM2G359298 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G359260 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.946258 x 10-1 | 26 | 29 | 28 | 29 | 47.27% | 50.88% | 55 | 57 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6858304' χ2 p-value for Mo17 x B73: '.8946258' Biased in favor of strain: '' |
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| GRMZM2G359260 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.424731 x 10-1 | 75 | 39 | 29 | 45 | 65.79% | 60.81% | 114 | 74 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8424731' χ2 p-value for Mo17 x B73: '.2852527' Biased in favor of strain: '' |
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| GRMZM2G359234 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.103548 x 10-1 | 85 | 138 | 76 | 97 | 38.12% | 56.07% | 223 | 173 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003865' χ2 p-value for Mo17 x B73: '.1103548' Biased in favor of strain: '' |
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| GRMZM2G359234 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.32885 x 10-2 | 91 | 28 | 86 | 109 | 76.47% | 55.90% | 119 | 195 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0232885' χ2 p-value for Mo17 x B73: '.0014221' Biased in favor of strain: '' |
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| GRMZM2G359217 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.68499 x 10-2 | 169 | 138 | 190 | 154 | 55.05% | 44.77% | 307 | 344 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0768499' χ2 p-value for Mo17 x B73: '.0522595' Biased in favor of strain: '' |
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| GRMZM2G359217 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.850496 x 10-1 | 31 | 4 | 17 | 46 | 88.57% | 73.02% | 35 | 63 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0059776' χ2 p-value for Mo17 x B73: '.2850496' Biased in favor of strain: '' |
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| GRMZM2G359127 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.012 x 10-4 | 40 | 7 | 29 | 6 | 85.11% | 17.14% | 47 | 35 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.48e-06' χ2 p-value for Mo17 x B73: '.0001012' Biased in favor of strain: 'B73' |
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| GRMZM2G359127 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.68 x 10-8 | 151 | 24 | 44 | 18 | 86.29% | 29.03% | 175 | 62 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.68e-08' χ2 p-value for Mo17 x B73: '3.25e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G359070 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.486153 x 10-1 | 132 | 128 | 125 | 122 | 50.77% | 49.39% | 260 | 247 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8040807' χ2 p-value for Mo17 x B73: '.8486153' Biased in favor of strain: '' |
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| GRMZM2G359070 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.99242 x 10-2 | 95 | 22 | 52 | 73 | 81.20% | 58.40% | 117 | 125 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0008563' χ2 p-value for Mo17 x B73: '.0499242' Biased in favor of strain: '' |
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| GRMZM2G359033 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 16 | 5 | 0 | 3 | 76.19% | 100.00% | 21 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0163773' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G359033 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.42281 x 10-2 | 5 | 21 | 9 | 43 | 19.23% | 82.69% | 26 | 52 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.88e-07' χ2 p-value for Mo17 x B73: '.0142281' Biased in favor of strain: '' |
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| GRMZM2G358931 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 221 | 221 | 226 | 238 | 50.00% | 51.29% | 442 | 464 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.5774686' Biased in favor of strain: '' |
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| GRMZM2G358931 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.639615 x 10-1 | 387 | 151 | 192 | 354 | 71.93% | 64.84% | 538 | 546 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.009565' χ2 p-value for Mo17 x B73: '.3639615' Biased in favor of strain: '' |
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| GRMZM2G358877 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.5387 x 10-3 | 219 | 159 | 187 | 133 | 57.94% | 41.56% | 378 | 320 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0020282' χ2 p-value for Mo17 x B73: '.0025387' Biased in favor of strain: 'B73' |
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| GRMZM2G358877 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.43 x 10-7 | 121 | 18 | 61 | 38 | 87.05% | 38.38% | 139 | 99 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.43e-07' χ2 p-value for Mo17 x B73: '2.38e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G358830 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 4 | 3 | 0 | 69.23% | 0.00% | 13 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1655179' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G358830 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.939308 x 10-1 | 41 | 13 | 11 | 13 | 75.93% | 54.17% | 54 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1489231' χ2 p-value for Mo17 x B73: '.1939308' Biased in favor of strain: '' |
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| GRMZM2G358827 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 6433 | 11707 | 8429 | 18422 | 35.46% | 68.61% | 18140 | 26851 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17' |
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| GRMZM2G358827 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 11363 | 4309 | 5719 | 7752 | 72.51% | 57.55% | 15672 | 13471 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G358791 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.279302 x 10-1 | 58 | 65 | 58 | 91 | 47.15% | 61.07% | 123 | 149 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5279302' χ2 p-value for Mo17 x B73: '.0068621' Biased in favor of strain: '' |
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| GRMZM2G358791 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 6 | 0 | 18 | 0.00% | 100.00% | 6 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: '' |
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| GRMZM2G358768 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.18489 x 10-2 | 38 | 19 | 42 | 20 | 66.67% | 32.26% | 57 | 62 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0118489' χ2 p-value for Mo17 x B73: '.005206' Biased in favor of strain: 'B73' |
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| GRMZM2G358768 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.170749 x 10-1 | 41 | 4 | 7 | 11 | 91.11% | 61.11% | 45 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0005043' χ2 p-value for Mo17 x B73: '.6170749' Biased in favor of strain: '' |
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| GRMZM2G358693 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.529 x 10-4 | 116 | 64 | 133 | 78 | 64.44% | 36.97% | 180 | 211 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001063' χ2 p-value for Mo17 x B73: '.0001529' Biased in favor of strain: 'B73' |
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| GRMZM2G358693 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.980249 x 10-1 | 12 | 28 | 20 | 50 | 30.00% | 71.43% | 40 | 70 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.68e-07' χ2 p-value for Mo17 x B73: '.3980249' Biased in favor of strain: '' |
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| GRMZM2G358540 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G358540 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 24 | 4 | 2 | 1 | 85.71% | 33.33% | 28 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0325109' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: '' |
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| GRMZM2G358491 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.981198 x 10-1 | 36 | 16 | 31 | 30 | 69.23% | 49.18% | 52 | 61 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0055457' χ2 p-value for Mo17 x B73: '.8981198' Biased in favor of strain: '' |
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| GRMZM2G358491 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.716078 x 10-1 | 4 | 7 | 7 | 18 | 36.36% | 72.00% | 11 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0330044' χ2 p-value for Mo17 x B73: '.5716078' Biased in favor of strain: '' |
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| GRMZM2G358467 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.129077 x 10-1 | 66 | 49 | 67 | 26 | 57.39% | 27.96% | 115 | 93 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1129077' χ2 p-value for Mo17 x B73: '.0000212' Biased in favor of strain: '' |
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| GRMZM2G358467 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.700716 x 10-1 | 14 | 3 | 24 | 29 | 82.35% | 54.72% | 17 | 53 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1700716' χ2 p-value for Mo17 x B73: '.064973' Biased in favor of strain: '' |
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| GRMZM2G358386 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.084818 x 10-1 | 197 | 215 | 203 | 220 | 47.82% | 52.01% | 412 | 423 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3751886' χ2 p-value for Mo17 x B73: '.4084818' Biased in favor of strain: '' |
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| GRMZM2G358386 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G358381 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.108693 x 10-1 | 344 | 410 | 326 | 368 | 45.62% | 53.03% | 754 | 694 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0162355' χ2 p-value for Mo17 x B73: '.1108693' Biased in favor of strain: '' |
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| GRMZM2G358381 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.767426 x 10-1 | 395 | 198 | 257 | 444 | 66.61% | 63.34% | 593 | 701 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9767426' χ2 p-value for Mo17 x B73: '.061554' Biased in favor of strain: '' |
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| GRMZM2G358311 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.492601 x 10-1 | 510 | 335 | 312 | 277 | 60.36% | 47.03% | 845 | 589 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.74e-09' χ2 p-value for Mo17 x B73: '.1492601' Biased in favor of strain: '' |
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| GRMZM2G358311 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.23869 x 10-2 | 585 | 251 | 314 | 507 | 69.98% | 61.75% | 836 | 821 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0423869' χ2 p-value for Mo17 x B73: '.0028259' Biased in favor of strain: '' |
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| GRMZM2G358238 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.011932 x 10-1 | 644 | 499 | 521 | 517 | 56.34% | 49.81% | 1143 | 1038 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000018' χ2 p-value for Mo17 x B73: '.9011932' Biased in favor of strain: '' |
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| GRMZM2G358238 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 623 | 15 | 417 | 43 | 97.65% | 9.35% | 638 | 460 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G358161 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 3 | 6 | 0.00% | 66.67% | 3 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G358161 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G358153 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G358153 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 1 | 0 | 75.00% | 0.00% | 4 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7236798' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G358076 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.22 x 10-28 | 1 | 135 | 3 | 132 | 0.74% | 97.78% | 136 | 135 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.47e-30' χ2 p-value for Mo17 x B73: '1.22e-28' Biased in favor of strain: 'Mo17' |
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| GRMZM2G358076 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.22 x 10-14 | 0 | 46 | 0 | 119 | 0.00% | 100.00% | 46 | 119 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.66e-22' χ2 p-value for Mo17 x B73: '1.22e-14' Biased in favor of strain: 'Mo17' |
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| GRMZM2G358059 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.4 x 10-29 | 4170 | 2821 | 3277 | 2424 | 59.65% | 42.52% | 6991 | 5701 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.35e-29' Biased in favor of strain: 'B73' |
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| GRMZM2G358059 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.76 x 10-28 | 2019 | 600 | 1018 | 1290 | 77.09% | 55.89% | 2619 | 2308 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.09e-29' χ2 p-value for Mo17 x B73: '4.76e-28' Biased in favor of strain: 'B73' |
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| GRMZM2G358051 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.35 x 10-6 | 556 | 417 | 519 | 374 | 57.14% | 41.88% | 973 | 893 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.35e-06' χ2 p-value for Mo17 x B73: '1.22e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G358051 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.801 x 10-4 | 129 | 31 | 83 | 34 | 80.62% | 29.06% | 160 | 117 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001801' χ2 p-value for Mo17 x B73: '6.18e-18' Biased in favor of strain: 'B73' |
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| GRMZM2G358050 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 19 | 19 | 25 | 22 | 50.00% | 46.81% | 38 | 47 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.6616799' Biased in favor of strain: '' |
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| GRMZM2G358050 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 1.439 x 10-4 | 0 | 11 | 9 | 1 | 0.00% | 10.00% | 11 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.73e-06' χ2 p-value for Mo17 x B73: '.0001439' Biased in favor of strain: '' |
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| GRMZM2G357923 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.157447 x 10-1 | 1052 | 1015 | 987 | 931 | 50.90% | 48.54% | 2067 | 1918 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4157447' χ2 p-value for Mo17 x B73: '.2010078' Biased in favor of strain: '' |
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| GRMZM2G357923 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.21 x 10-15 | 1229 | 387 | 760 | 976 | 76.05% | 56.22% | 1616 | 1736 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.21e-15' χ2 p-value for Mo17 x B73: '2.65e-20' Biased in favor of strain: 'B73' |
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| GRMZM2G357873 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.02 x 10-6 | 273 | 39 | 145 | 77 | 87.50% | 34.68% | 312 | 222 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '5.02e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G357873 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1258 | 150 | 695 | 426 | 89.35% | 38.00% | 1408 | 1121 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G357834 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.95 x 10-5 | 47 | 5 | 26 | 3 | 90.38% | 10.34% | 52 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.73e-09' χ2 p-value for Mo17 x B73: '.0000195' Biased in favor of strain: 'B73' |
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| GRMZM2G357834 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.1 x 10-9 | 255 | 52 | 89 | 54 | 83.06% | 37.76% | 307 | 143 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.10e-09' χ2 p-value for Mo17 x B73: '2.26e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G357804 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.985864 x 10-1 | 68 | 80 | 50 | 57 | 45.95% | 53.27% | 148 | 107 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3239399' χ2 p-value for Mo17 x B73: '.4985864' Biased in favor of strain: '' |
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| GRMZM2G357804 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.119612 x 10-1 | 78 | 21 | 46 | 68 | 78.79% | 59.65% | 99 | 114 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0105164' χ2 p-value for Mo17 x B73: '.1119612' Biased in favor of strain: '' |
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| GRMZM2G357688 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 0 | 2 | 100.00% | 100.00% | 7 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G357688 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 4 | 100.00% | 100.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G357683 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.071251 x 10-1 | 79 | 83 | 77 | 74 | 48.77% | 49.01% | 162 | 151 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7533162' χ2 p-value for Mo17 x B73: '.8071251' Biased in favor of strain: '' |
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| GRMZM2G357683 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.112994 x 10-1 | 33 | 24 | 29 | 43 | 57.89% | 59.72% | 57 | 72 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1600453' χ2 p-value for Mo17 x B73: '.2112994' Biased in favor of strain: '' |
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| GRMZM2G357667 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G357667 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 0 | 6 | 0.00% | 100.00% | 4 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046775' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G357660 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.46 x 10-8 | 503 | 341 | 529 | 347 | 59.60% | 39.61% | 844 | 876 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.46e-08' χ2 p-value for Mo17 x B73: '7.79e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G357660 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.054837 x 10-1 | 118 | 67 | 62 | 37 | 63.78% | 37.37% | 185 | 99 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4054837' χ2 p-value for Mo17 x B73: '6.30e-10' Biased in favor of strain: '' |
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| GRMZM2G357636 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 5 | 4 | 44.44% | 0 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.7388827' Biased in favor of strain: '' |
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| GRMZM2G357636 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.355 x 10-4 | 27 | 1 | 14 | 1 | 96.43% | 6.67% | 28 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0008355' χ2 p-value for Mo17 x B73: '8.24e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G357631 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.173105 x 10-1 | 78 | 66 | 57 | 33 | 54.17% | 36.67% | 144 | 90 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.011412' Biased in favor of strain: '' |
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| GRMZM2G357631 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.63478 x 10-2 | 18 | 1 | 9 | 8 | 94.74% | 47.06% | 19 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0094445' χ2 p-value for Mo17 x B73: '.0863478' Biased in favor of strain: '' |
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| GRMZM2G357620 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.23 x 10-20 | 272 | 97 | 216 | 56 | 73.71% | 20.59% | 369 | 272 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.23e-20' χ2 p-value for Mo17 x B73: '2.97e-22' Biased in favor of strain: 'B73' |
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| GRMZM2G357620 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 1 | 17 | 0.00% | 94.44% | 1 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.0124193' Biased in favor of strain: '' |
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| GRMZM2G357595 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.43122 x 10-2 | 166 | 96 | 120 | 93 | 63.36% | 43.66% | 262 | 213 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000153' χ2 p-value for Mo17 x B73: '.0643122' Biased in favor of strain: '' |
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| GRMZM2G357595 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.864221 x 10-1 | 9 | 1 | 2 | 9 | 90.00% | 81.82% | 10 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1175272' χ2 p-value for Mo17 x B73: '.2864221' Biased in favor of strain: '' |
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| GRMZM2G357455 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.0 x 10-19 | 128 | 3 | 104 | 9 | 97.71% | 7.96% | 131 | 113 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.12e-28' χ2 p-value for Mo17 x B73: '4.00e-19' Biased in favor of strain: 'B73' |
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| GRMZM2G357455 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.74 x 10-8 | 83 | 5 | 69 | 1 | 94.32% | 1.43% | 88 | 70 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.74e-08' χ2 p-value for Mo17 x B73: '5.29e-31' Biased in favor of strain: 'B73' |
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| GRMZM2G357399 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.6631 x 10-3 | 144 | 80 | 99 | 61 | 64.29% | 38.12% | 224 | 160 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000019' χ2 p-value for Mo17 x B73: '.0026631' Biased in favor of strain: 'B73' |
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| GRMZM2G357399 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.124226 x 10-1 | 44 | 41 | 29 | 63 | 51.76% | 68.48% | 85 | 92 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0035624' χ2 p-value for Mo17 x B73: '.7124226' Biased in favor of strain: '' |
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| GRMZM2G357349 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.24 x 10-8 | 38 | 0 | 29 | 0 | 100.00% | 0.00% | 38 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.07e-10' χ2 p-value for Mo17 x B73: '7.24e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G357349 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 18 | 0 | 4 | 0 | 100.00% | 0.00% | 18 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026999' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G357296 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1856 | 83 | 1945 | 109 | 95.72% | 5.31% | 1939 | 2054 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G357296 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 3257 | 89 | 1850 | 229 | 97.34% | 11.01% | 3346 | 2079 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G357112 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.111 x 10-4 | 23 | 0 | 11 | 0 | 100.00% | 0.00% | 23 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.62e-06' χ2 p-value for Mo17 x B73: '.0009111' Biased in favor of strain: 'B73' |
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| GRMZM2G357112 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 2 | 0 | 100.00% | 0.00% | 7 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0613697' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM2G357040 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 2 | 7 | 5 | 33.33% | 41.67% | 3 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G357040 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 5 | 1 | 12 | 28.57% | 92.31% | 7 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0325079' χ2 p-value for Mo17 x B73: '.0498602' Biased in favor of strain: '' |
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| GRMZM2G357034 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 3 | 60.00% | 0 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: '' |
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| GRMZM2G357034 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |