Displaying data sets 74601 - 74700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G48820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 4 0 0 33.33% 6 0 TAIR8 Avg. embryo expression (dissected): '36.842'
Avg. embryo expression (LCM): '21.5631'
AT3G48820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 3 4 8 62.50% 66.67% 8 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '45.2685'
Avg. expression score in LCM sample: '17.6669'
Tissue used: 'full endosperm'
AT3G48820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.877 x 10-2 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 3 0 3 40.00% 100.00% 5 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '37.9879'
Avg. expression score in LCM sample: '17.6669'
Tissue used: 'pure endosperm, no chalazal'
AT3G48810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 2 6 13 66.67% 68.42% 6 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '45.4264'
Avg. expression score in LCM sample: '45.299'
Tissue used: 'pure endosperm, no chalazal'
AT3G48810 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 23 10 69.70% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 11 4 7 13 73.33% 65.00% 15 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '46.8432'
Avg. expression score in LCM sample: '45.299'
Tissue used: 'full endosperm'
AT3G48810 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.6564 x 10-2 23 2 92.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.93038 x 10-1 12 12 1 4 50.00% 80.00% 24 5 TAIR8 Avg. embryo expression (dissected): '95.3798'
Avg. embryo expression (LCM): '77.4236'
AT3G48810 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48800 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48800 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '996.195'
Avg. embryo expression (LCM): '587.365'
AT3G48800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1065.11'
Avg. expression score in LCM sample: '174.053'
Tissue used: 'full endosperm'
AT3G48800 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '811.732'
Avg. expression score in LCM sample: '174.053'
Tissue used: 'pure endosperm, no chalazal'
AT3G48800 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48790 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48790 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '1.82366'
Avg. embryo expression (LCM): '0'
AT3G48790 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '.49466'
Avg. expression score in LCM sample: '1.411'
Tissue used: 'pure endosperm, no chalazal'
AT3G48790 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.7619 x 10-2 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 4 0 0 0 100.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '1.37189'
Avg. expression score in LCM sample: '1.411'
Tissue used: 'full endosperm'
AT3G48780 SPT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.3787 x 10-2 46 6 16 43 88.46% 72.88% 52 59 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.113641'
Avg. expression score for this sample: '122.25'
Avg. expression score in LCM sample: '61.6725'
Tissue used: 'full endosperm'
AT3G48780 SPT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.50048 x 10-1 57 23 71.25% 80 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48780 SPT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 36 5 21 16 87.80% 43.24% 41 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.113641'
Avg. expression score for this sample: '62.7208'
Avg. expression score in LCM sample: '61.6725'
Tissue used: 'pure endosperm, no chalazal'
AT3G48780 SPT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.6 x 10-6 177 14 92.67% 191 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48780 SPT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 8 2 80.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48780 SPT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.91329 x 10-1 14 6 5 2 70.00% 28.57% 20 7 TAIR8 Avg. embryo expression (dissected): '43.6325'
Avg. embryo expression (LCM): '49.0412'
AT3G48770 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 1 3 3 1 25.00% 25.00% 4 4 TAIR8 Avg. embryo expression (dissected): '2.46558'
Avg. embryo expression (LCM): '5.53833'
AT3G48770 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 4 0.00% 100.00% 1 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.14116'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G48770 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.2779 x 10-2 11 18 37.93% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.17685'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G48770 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.90184 x 10-1 79 6 92.94% 85 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.2 x 10-7 292 47 86.14% 339 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.49859 x 10-1 84 39 42 56 68.29% 57.14% 123 98 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.057698'
Avg. expression score for this sample: '130.488'
Avg. expression score in LCM sample: '101.313'
Tissue used: 'pure endosperm, no chalazal'
AT3G48760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.39098 x 10-1 36 12 75.00% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.49811 x 10-1 56 43 21 19 56.57% 47.50% 99 40 TAIR8 Avg. embryo expression (dissected): '113.917'
Avg. embryo expression (LCM): '78.6292'
AT3G48760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.314 x 10-3 135 23 61 147 85.44% 70.67% 158 208 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.057698'
Avg. expression score for this sample: '194.389'
Avg. expression score in LCM sample: '101.313'
Tissue used: 'full endosperm'
AT3G48760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.3 x 10-6 106 89 54.36% 195 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48750 CDC2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.50576 x 10-1 31 13 70.45% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48750 CDC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.68883 x 10-1 29 18 11 23 61.70% 67.65% 47 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '100.809'
Avg. expression score in LCM sample: '107.515'
Tissue used: 'full endosperm'
AT3G48750 CDC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.3191 x 10-1 22 3 8 8 88.00% 50.00% 25 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '90.2646'
Avg. expression score in LCM sample: '107.515'
Tissue used: 'pure endosperm, no chalazal'
AT3G48750 CDC2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.413 x 10-3 40 4 90.91% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48750 CDC2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.31857 x 10-1 9 4 3 1 69.23% 25.00% 13 4 TAIR8 Avg. embryo expression (dissected): '55.8054'
Avg. embryo expression (LCM): '52.6204'
AT3G48750 CDC2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.17814 x 10-1 7 2 77.78% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48745 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48745 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G48745 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G48745 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48745 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48745 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G48740 SWEET11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.02247 x 10-1 163 75 166 249 68.49% 60.00% 238 415 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.466714'
Avg. expression score for this sample: '1205.07'
Avg. expression score in LCM sample: '643.592'
Tissue used: 'pure endosperm, no chalazal'
AT3G48740 SWEET11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.4634 x 10-2 17 3 85.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48740 SWEET11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28656 x 10-1 6 7 4 12 46.15% 75.00% 13 16 TAIR8 Avg. embryo expression (dissected): '80.3914'
Avg. embryo expression (LCM): '9.63243'
AT3G48740 SWEET11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.5738 x 10-2 35 32 52.24% 67 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48740 SWEET11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.6793 x 10-2 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48740 SWEET11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.78298 x 10-1 215 107 178 366 66.77% 67.28% 322 544 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.466714'
Avg. expression score for this sample: '682.601'
Avg. expression score in LCM sample: '643.592'
Tissue used: 'full endosperm'
AT3G48730 GSA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '71.9754'
Avg. expression score in LCM sample: '50.7813'
Tissue used: 'full endosperm'
AT3G48730 GSA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48730 GSA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48730 GSA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '54.5652'
Avg. expression score in LCM sample: '50.7813'
Tissue used: 'pure endosperm, no chalazal'
AT3G48730 GSA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48730 GSA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '278.26'
Avg. embryo expression (LCM): '326.523'
AT3G48720 DCF embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G48720 DCF endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48720 DCF endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48720 DCF endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.502492'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G48720 DCF endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G48720 DCF endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.988 x 10-3 38 4 90.48% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.54622 x 10-1 5 3 6 8 62.50% 57.14% 8 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '116.582'
Avg. expression score in LCM sample: '33.8052'
Tissue used: 'pure endosperm, no chalazal'
AT3G48710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.47336 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.23107 x 10-1 9 5 2 3 64.29% 60.00% 14 5 TAIR8 Avg. embryo expression (dissected): '205.735'
Avg. embryo expression (LCM): '262.135'
AT3G48710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.21033 x 10-1 10 6 7 23 62.50% 76.67% 16 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '195.77'
Avg. expression score in LCM sample: '33.8052'
Tissue used: 'full endosperm'
AT3G48710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.53015 x 10-1 24 7 77.42% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48700 CXE13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48700 CXE13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '92.6803'
Avg. expression score in LCM sample: '124.477'
Tissue used: 'full endosperm'
AT3G48700 CXE13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '158.966'
Avg. expression score in LCM sample: '124.477'
Tissue used: 'pure endosperm, no chalazal'
AT3G48700 CXE13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48700 CXE13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '56.8074'
Avg. embryo expression (LCM): '152.386'
AT3G48700 CXE13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48690 CXE12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.799 x 10-3 112 48 70.00% 160 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48690 CXE12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.91253 x 10-1 126 125 28 38 50.20% 57.58% 251 66 TAIR8 Avg. embryo expression (dissected): '515.388'
Avg. embryo expression (LCM): '337.512'
AT3G48690 CXE12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.8 x 10-11 476 91 104 311 83.95% 74.94% 567 415 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.5e-19'
Avg. expression score for this sample: '1297.72'
Avg. expression score in LCM sample: '131.252'
Tissue used: 'full endosperm'
AT3G48690 CXE12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.7272 x 10-1 574 115 83.31% 689 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48690 CXE12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.92146 x 10-1 3327 736 81.89% 4063 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48690 CXE12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.1 x 10-9 311 57 37 123 84.51% 76.88% 368 160 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.5e-19'
Avg. expression score for this sample: '485.874'
Avg. expression score in LCM sample: '131.252'
Tissue used: 'pure endosperm, no chalazal'
AT3G48680 GAMMA CAL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 16 2 8 7 88.89% 46.67% 18 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.12648'
Avg. expression score for this sample: '134.289'
Avg. expression score in LCM sample: '98.5936'
Tissue used: 'pure endosperm, no chalazal'
AT3G48680 GAMMA CAL2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.51 x 10-4 98 9 91.59% 107 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48680 GAMMA CAL2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.10898 x 10-1 16 4 1 0 80.00% 0.00% 20 1 TAIR8 Avg. embryo expression (dissected): '141.322'
Avg. embryo expression (LCM): '135.231'
AT3G48680 GAMMA CAL2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.762 x 10-3 2 6 25.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48680 GAMMA CAL2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.84058 x 10-1 35 17 67.31% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48680 GAMMA CAL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.47358 x 10-1 76 11 31 48 87.36% 60.76% 87 79 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.12648'
Avg. expression score for this sample: '110.578'
Avg. expression score in LCM sample: '98.5936'
Tissue used: 'full endosperm'
AT3G48675 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.00796'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G48675 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48675 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48675 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G48675 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G48675 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.61739'
Avg. embryo expression (LCM): '0'