Displaying data sets 74301 - 74400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G49307 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4.74367'
Avg. embryo expression (LCM): '0'
AT3G49307 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49307 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49307 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '29.8703'
Avg. expression score in LCM sample: '33.1585'
Tissue used: 'full endosperm'
AT3G49305 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.699 x 10-3 5 0 0 21 100.00% 100.00% 5 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.0116'
Avg. expression score for this sample: '32.8375'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G49305 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49305 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G49305 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.98 x 10-4 22 17 56.41% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49305 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 1 50.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.0116'
Avg. expression score for this sample: '2.02727'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G49305 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.84236 x 10-1 15 3 83.33% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.6175 x 10-2 69 20 77.53% 89 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.43573 x 10-1 139 79 72 158 63.76% 68.70% 218 230 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.803316'
Avg. expression score for this sample: '313.944'
Avg. expression score in LCM sample: '196.599'
Tissue used: 'pure endosperm, no chalazal'
AT3G49300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.6688 x 10-2 100 65 60.61% 165 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.81 x 10-4 16 26 38.10% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.81829 x 10-1 359 74 205 225 82.91% 52.33% 433 430 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.803316'
Avg. expression score for this sample: '388.55'
Avg. expression score in LCM sample: '196.599'
Tissue used: 'full endosperm'
AT3G49300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 3 0 2 3 100.00% 60.00% 3 5 TAIR8 Avg. embryo expression (dissected): '13.1816'
Avg. embryo expression (LCM): '0'
AT3G49290 ABIL2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 2 1 0 50.00% 0.00% 4 1 TAIR8 Avg. embryo expression (dissected): '6.06989'
Avg. embryo expression (LCM): '4.19456'
AT3G49290 ABIL2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49290 ABIL2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.72527 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49290 ABIL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 2 1 1 50.00% 50.00% 4 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.680172'
Avg. expression score for this sample: '10.0756'
Avg. expression score in LCM sample: '3.93904'
Tissue used: 'full endosperm'
AT3G49290 ABIL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 3 0 2 25.00% 100.00% 4 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.680172'
Avg. expression score for this sample: '7.95807'
Avg. expression score in LCM sample: '3.93904'
Tissue used: 'pure endosperm, no chalazal'
AT3G49290 ABIL2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.3706 x 10-2 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.34274 x 10-1 19 2 90.48% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.090226'
Avg. expression score for this sample: '6.37744'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G49270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 9.0226 x 10-2 0 0 0 11 100.00% 0 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.090226'
Avg. expression score for this sample: '24.3'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G49270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Avg. embryo expression (dissected): '1.42725'
Avg. embryo expression (LCM): '0'
AT3G49270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49260 iqd21 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.01291 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49260 iqd21 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.08197 x 10-1 5 6 45.45% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49260 iqd21 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.3544 x 10-1 89 46 61 89 65.93% 59.33% 135 150 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.66796'
Avg. expression score for this sample: '92.6253'
Avg. expression score in LCM sample: '11.8171'
Tissue used: 'full endosperm'
AT3G49260 iqd21 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.54052 x 10-1 78 101 29 41 43.58% 58.57% 179 70 TAIR8 Avg. embryo expression (dissected): '307.652'
Avg. embryo expression (LCM): '81.5177'
AT3G49260 iqd21 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.38126 x 10-1 41 25 20 64 62.12% 76.19% 66 84 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.66796'
Avg. expression score for this sample: '94.3263'
Avg. expression score in LCM sample: '11.8171'
Tissue used: 'pure endosperm, no chalazal'
AT3G49260 iqd21 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.32336 x 10-1 15 3 83.33% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49250 DMS3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49250 DMS3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '90.0327'
Avg. expression score in LCM sample: '39.1259'
Tissue used: 'pure endosperm, no chalazal'
AT3G49250 DMS3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '174.306'
Avg. embryo expression (LCM): '149.058'
AT3G49250 DMS3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49250 DMS3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49250 DMS3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '122.695'
Avg. expression score in LCM sample: '39.1259'
Tissue used: 'full endosperm'
AT3G49240 emb1796 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.27386 x 10-1 14 2 0 4 87.50% 100.00% 16 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.17269'
Avg. expression score for this sample: '1044.62'
Avg. expression score in LCM sample: '169.776'
Tissue used: 'full endosperm'
AT3G49240 emb1796 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.46467 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49240 emb1796 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.2349 x 10-1 14 7 2 9 66.67% 81.82% 21 11 TAIR8 Avg. embryo expression (dissected): '1592.9'
Avg. embryo expression (LCM): '1755'
AT3G49240 emb1796 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.74625 x 10-1 25 12 67.57% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49240 emb1796 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 10 4 0 2 71.43% 100.00% 14 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.17269'
Avg. expression score for this sample: '592.502'
Avg. expression score in LCM sample: '169.776'
Tissue used: 'pure endosperm, no chalazal'
AT3G49240 emb1796 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 22 4 84.62% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G49230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G49230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G49220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 12 10 3 3 54.55% 50.00% 22 6 TAIR8 Avg. embryo expression (dissected): '29.323'
Avg. embryo expression (LCM): '6.74396'
AT3G49220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 3 3 9 40.00% 75.00% 5 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.91552'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G49220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.88817'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G49220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.89 x 10-4 42 0 100.00% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 25 0 100.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '.580835'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G49210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 4.44444 x 10-1 0 0 0 5 100.00% 0 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '7.06304'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G49210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.161829'
Avg. embryo expression (LCM): '0'
AT3G49210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.2381 x 10-1 8 2 80.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 12 2 85.71% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.106868'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G49200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G49200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.151456'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G49200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 30 11 73.17% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.02797 x 10-1 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 2 0 1 0.00% 100.00% 2 1 TAIR8 Avg. embryo expression (dissected): '.770394'
Avg. embryo expression (LCM): '2.92615'
AT3G49190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.30769 x 10-1 2 0 0 5 100.00% 100.00% 2 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.00377'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G49190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 1 0 50.00% 0.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.449612'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G49180 RID3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.856872'
Avg. expression score in LCM sample: '1.95482'
Tissue used: 'pure endosperm, no chalazal'
AT3G49180 RID3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49180 RID3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.2381 x 10-1 1 2 2 0 33.33% 0.00% 3 2 TAIR8 Avg. embryo expression (dissected): '10.5093'
Avg. embryo expression (LCM): '7.53515'
AT3G49180 RID3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 1 3 100.00% 75.00% 1 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.42627'
Avg. expression score in LCM sample: '1.95482'
Tissue used: 'full endosperm'
AT3G49180 RID3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49180 RID3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49170 EMB2261 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.9899 x 10-2 277 80 77.59% 357 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49170 EMB2261 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.44105 x 10-1 409 235 63.51% 644 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49170 EMB2261 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.64412 x 10-1 5 4 55.56% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49170 EMB2261 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.51898 x 10-1 25 18 5 15 58.14% 75.00% 43 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.662245'
Avg. expression score for this sample: '26.164'
Avg. expression score in LCM sample: '15.2417'
Tissue used: 'pure endosperm, no chalazal'
AT3G49170 EMB2261 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.18573 x 10-1 40 2 34 54 95.24% 61.36% 42 88 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.662245'
Avg. expression score for this sample: '47.0933'
Avg. expression score in LCM sample: '15.2417'
Tissue used: 'full endosperm'
AT3G49170 EMB2261 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.7791 x 10-1 75 54 20 16 58.14% 44.44% 129 36 TAIR8 Avg. embryo expression (dissected): '111.749'
Avg. embryo expression (LCM): '122.019'
AT3G49160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.25237 x 10-1 37 65 10 12 36.27% 54.55% 102 22 TAIR8 Avg. embryo expression (dissected): '112.264'
Avg. embryo expression (LCM): '49.3929'
AT3G49160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.8768 x 10-1 13 5 72.22% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.7 x 10-6 68 2 97.14% 70 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.8 x 10-5 56 36 49 268 60.87% 84.54% 92 317 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002845'
Avg. expression score for this sample: '144.725'
Avg. expression score in LCM sample: '19.8716'
Tissue used: 'full endosperm'
AT3G49160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.19006 x 10-1 64 56 18 78 53.33% 81.25% 120 96 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002845'
Avg. expression score for this sample: '120.853'
Avg. expression score in LCM sample: '19.8716'
Tissue used: 'pure endosperm, no chalazal'
AT3G49160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.08125 x 10-1 86 30 74.14% 116 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49150 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.07401'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G49150 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G49150 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.451512'
Avg. embryo expression (LCM): '0'
AT3G49150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.267074'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G49150 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'