Displaying data sets 73101 - 73200 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G51070 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.10898 x 10-1 15 0 5 1 100.00% 16.67% 15 6 TAIR8 Avg. embryo expression (dissected): '118.029'
Avg. embryo expression (LCM): '127.407'
AT3G51070 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.0 x 10-13 157 2 98.74% 159 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51070 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 18 2 11 10 90.00% 47.62% 20 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.770034'
Avg. expression score for this sample: '198.379'
Avg. expression score in LCM sample: '21.2973'
Tissue used: 'pure endosperm, no chalazal'
AT3G51060 STY1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.2694'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G51060 STY1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51060 STY1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51060 STY1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '37.1852'
Avg. embryo expression (LCM): '28.2191'
AT3G51060 STY1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.82561'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G51060 STY1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51057 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51057 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G51057 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51057 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G51057 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G51057 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51050 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.689 x 10-2 168 50 77.06% 218 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.89638 x 10-1 142 46 74 127 75.53% 63.18% 188 201 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.170072'
Avg. expression score for this sample: '267.755'
Avg. expression score in LCM sample: '214.869'
Tissue used: 'full endosperm'
AT3G51050 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.22997 x 10-1 65 60 49 40 52.00% 44.94% 125 89 TAIR8 Avg. embryo expression (dissected): '226.947'
Avg. embryo expression (LCM): '146.056'
AT3G51050 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7 x 10-19 315 21 93.75% 336 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51050 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.464 x 10-3 70 13 84.34% 83 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.85239 x 10-1 98 32 41 92 75.38% 69.17% 130 133 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.170072'
Avg. expression score for this sample: '182.78'
Avg. expression score in LCM sample: '214.869'
Tissue used: 'pure endosperm, no chalazal'
AT3G51040 RTH endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.66465 x 10-1 35 11 14 21 76.09% 60.00% 46 35 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.600761'
Avg. expression score for this sample: '167.059'
Avg. expression score in LCM sample: '37.9353'
Tissue used: 'pure endosperm, no chalazal'
AT3G51040 RTH endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.492 x 10-2 60 46 56.60% 106 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51040 RTH endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.77123 x 10-1 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51040 RTH embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.23036 x 10-1 18 17 5 0 51.43% 0.00% 35 5 TAIR8 Avg. embryo expression (dissected): '114.097'
Avg. embryo expression (LCM): '67.2386'
AT3G51040 RTH endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.8847 x 10-1 50 17 22 40 74.63% 64.52% 67 62 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.600761'
Avg. expression score for this sample: '156.117'
Avg. expression score in LCM sample: '37.9353'
Tissue used: 'full endosperm'
AT3G51040 RTH endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.2 x 10-5 78 8 90.70% 86 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51030 TRX1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.0 x 10-9 447 70 86.46% 517 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51030 TRX1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.02478 x 10-1 16 12 2 1 57.14% 33.33% 28 3 TAIR8 Avg. embryo expression (dissected): '31.3078'
Avg. embryo expression (LCM): '46.7556'
AT3G51030 TRX1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.87574 x 10-1 72 0 100.00% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51030 TRX1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.4 x 10-24 98 5 0 162 95.15% 100.00% 103 162 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.2e-26'
Avg. expression score for this sample: '139.801'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G51030 TRX1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.9062 x 10-2 12 0 0 6 100.00% 100.00% 12 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.2e-26'
Avg. expression score for this sample: '18.7416'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G51030 TRX1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2 x 10-6 132 21 86.27% 153 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51020 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G51020 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G51020 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51020 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.642644'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G51010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.77618 x 10-1 78 19 31 58 80.41% 65.17% 97 89 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '529.453'
Avg. expression score in LCM sample: '307.716'
Tissue used: 'pure endosperm, no chalazal'
AT3G51010 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.26224 x 10-1 148 95 60.91% 243 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51010 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.87395 x 10-1 18 11 62.07% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51010 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.4097 x 10-1 93 80 29 28 53.76% 49.12% 173 57 TAIR8 Avg. embryo expression (dissected): '871.62'
Avg. embryo expression (LCM): '793.175'
AT3G51010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.95467 x 10-1 137 51 84 96 72.87% 53.33% 188 180 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '405.649'
Avg. expression score in LCM sample: '307.716'
Tissue used: 'full endosperm'
AT3G51010 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.4 x 10-6 218 49 81.65% 267 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51000 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4 x 10-26 1653 8 99.52% 1661 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51000 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 11 12 1 4 47.83% 80.00% 23 5 TAIR8 Avg. embryo expression (dissected): '48.1822'
Avg. embryo expression (LCM): '10.4362'
AT3G51000 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.3 x 10-14 825 5 99.40% 830 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 883 171 86 4262 83.78% 98.02% 1054 4348 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1432.53'
Avg. expression score in LCM sample: '106.648'
Tissue used: 'full endosperm'
AT3G51000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.9 x 10-12 127 53 21 305 70.56% 93.56% 180 326 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '458.412'
Avg. expression score in LCM sample: '106.648'
Tissue used: 'pure endosperm, no chalazal'
AT3G51000 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 4299 5 99.88% 4304 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G50990 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 132 1 99.25% 133 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G50990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.7 x 10-18 148 0 0 9 100.00% 100.00% 148 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.4e-22'
Avg. expression score for this sample: '35.5425'
Avg. expression score in LCM sample: '7.01091'
Tissue used: 'full endosperm'
AT3G50990 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.461927'
Avg. embryo expression (LCM): '1.00469'
AT3G50990 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.1554 x 10-2 2647 0 100.00% 2647 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G50990 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 101 0 100.00% 101 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G50990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.6 x 10-5 46 1 0 0 97.87% 47 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.4e-22'
Avg. expression score for this sample: '13.8843'
Avg. expression score in LCM sample: '7.01091'
Tissue used: 'pure endosperm, no chalazal'
AT3G50980 XERO1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '40.8808'
Avg. expression score in LCM sample: '2.30757'
Tissue used: 'pure endosperm, no chalazal'
AT3G50980 XERO1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G50980 XERO1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G50980 XERO1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '26.8832'
Avg. embryo expression (LCM): '0'
AT3G50980 XERO1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '124.506'
Avg. expression score in LCM sample: '2.30757'
Tissue used: 'full endosperm'
AT3G50980 XERO1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G50970 LTI30 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.29371 x 10-1 9 4 69.23% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G50970 LTI30 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.747287'
Avg. embryo expression (LCM): '0'
AT3G50970 LTI30 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.6681 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G50970 LTI30 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.57394 x 10-1 1 4 2 25 20.00% 92.59% 5 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.262434'
Avg. expression score for this sample: '41.0021'
Avg. expression score in LCM sample: '1.89603'
Tissue used: 'full endosperm'
AT3G50970 LTI30 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.262434'
Avg. expression score for this sample: '9.65966'
Avg. expression score in LCM sample: '1.89603'
Tissue used: 'pure endosperm, no chalazal'
AT3G50970 LTI30 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.67693 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G50960 PLP3a endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G50960 PLP3a endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 2 2 6 50.00% 75.00% 4 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '95.3991'
Avg. expression score in LCM sample: '27.6174'
Tissue used: 'full endosperm'
AT3G50960 PLP3a embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '34.7913'
Avg. embryo expression (LCM): '19.8802'
AT3G50960 PLP3a endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.26058 x 10-1 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G50960 PLP3a endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G50960 PLP3a endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 1 2 100.00% 66.67% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '41.427'
Avg. expression score in LCM sample: '27.6174'
Tissue used: 'pure endosperm, no chalazal'
AT3G50950 ZAR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.24183 x 10-1 8 8 6 7 50.00% 53.85% 16 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.050333'
Avg. expression score for this sample: '32.0842'
Avg. expression score in LCM sample: '6.59936'
Tissue used: 'pure endosperm, no chalazal'
AT3G50950 ZAR1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.0641 x 10-2 91 15 85.85% 106 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G50950 ZAR1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.0333 x 10-1 11 1 91.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G50950 ZAR1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.15024 x 10-1 8 36 6 21 18.18% 77.78% 44 27 TAIR8 Avg. embryo expression (dissected): '106.607'
Avg. embryo expression (LCM): '27.3149'
AT3G50950 ZAR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.708 x 10-3 39 16 14 87 70.91% 86.14% 55 101 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.050333'
Avg. expression score for this sample: '80.3092'
Avg. expression score in LCM sample: '6.59936'
Tissue used: 'full endosperm'
AT3G50950 ZAR1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.751 x 10-3 171 22 88.60% 193 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G50940 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G50940 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G50940 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G50940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.23217'
Avg. expression score in LCM sample: '1.95482'
Tissue used: 'pure endosperm, no chalazal'
AT3G50940 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G50940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.23737'
Avg. expression score in LCM sample: '1.95482'
Tissue used: 'full endosperm'
AT3G50930 BCS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.7 x 10-8 121 91 21 357 57.08% 94.44% 212 378 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.7e-07'
Avg. expression score for this sample: '123.695'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G50930 BCS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.9 x 10-6 421 45 90.34% 466 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G50930 BCS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.54886 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G50930 BCS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.219 x 10-2 39 79 5 16 33.05% 76.19% 118 21 TAIR8 Avg. embryo expression (dissected): '64.8673'
Avg. embryo expression (LCM): '4.34527'
AT3G50930 BCS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.18368 x 10-1 409 80 83.64% 489 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G50930 BCS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.80129 x 10-1 1 11 1 11 8.33% 91.67% 12 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.7e-07'
Avg. expression score for this sample: '11.6389'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G50925 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G50925 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G50925 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G50925 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G50925 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G50925 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'