| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT3G51350 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '2.96216' Avg. expression score in LCM sample: '2.20469' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G51350 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '3.23354' Avg. expression score in LCM sample: '2.20469' Tissue used: 'full endosperm' |
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| AT3G51350 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '10.5974' Avg. embryo expression (LCM): '16.3136' |
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| AT3G51350 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G51350 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G51350 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G51340 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G51340 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G51340 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '31.7721' Avg. expression score in LCM sample: '7.23137' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G51340 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G51340 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '31.5414' Avg. embryo expression (LCM): '34.9756' |
||||||
| AT3G51340 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '19.9202' Avg. expression score in LCM sample: '7.23137' Tissue used: 'full endosperm' |
|||||||
| AT3G51330 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 4 | 1 | 0 | 2 | 80.00% | 100.00% | 5 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.582043' Avg. expression score for this sample: '5.80807' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT3G51330 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 7 | 8 | 2 | 1 | 46.67% | 33.33% | 15 | 3 | TAIR8 |
Avg. embryo expression (dissected): '22.0795' Avg. embryo expression (LCM): '12.8097' |
||||
| AT3G51330 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.66727 x 10-1 | 35 | 9 | 79.55% | 44 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G51330 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 6 | 0 | 100.00% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G51330 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G51330 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.582043' Avg. expression score for this sample: '3.66877' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G51325 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.10587' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT3G51325 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G51325 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.825953' Avg. embryo expression (LCM): '0' |
||||||
| AT3G51325 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '6.01974' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT3G51325 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G51325 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G51320 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.2441 x 10-2 | 103 | 17 | 85.83% | 120 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G51320 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.7804 x 10-2 | 5 | 7 | 41.67% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G51320 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.80168 x 10-1 | 21 | 9 | 3 | 18 | 70.00% | 85.71% | 30 | 21 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.159833' Avg. expression score for this sample: '60.5787' Avg. expression score in LCM sample: '34.4372' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G51320 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.60765 x 10-1 | 26 | 6 | 12 | 29 | 81.25% | 70.73% | 32 | 41 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.159833' Avg. expression score for this sample: '71.3538' Avg. expression score in LCM sample: '34.4372' Tissue used: 'full endosperm' |
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| AT3G51320 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.78141 x 10-1 | 35 | 35 | 9 | 6 | 50.00% | 40.00% | 70 | 15 | TAIR8 |
Avg. embryo expression (dissected): '166.06' Avg. embryo expression (LCM): '161.214' |
||||
| AT3G51320 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 95 | 31 | 75.40% | 126 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G51310 | VPS35C | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.70672 x 10-1 | 49 | 23 | 68.06% | 72 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G51310 | VPS35C | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.52673 x 10-1 | 13 | 23 | 9 | 4 | 36.11% | 30.77% | 36 | 13 | TAIR8 |
Avg. embryo expression (dissected): '109.735' Avg. embryo expression (LCM): '69.9638' |
|||
| AT3G51310 | VPS35C | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.69697 x 10-1 | 63 | 18 | 30 | 68 | 77.78% | 69.39% | 81 | 98 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.387106' Avg. expression score for this sample: '149.046' Avg. expression score in LCM sample: '34.349' Tissue used: 'full endosperm' |
||||
| AT3G51310 | VPS35C | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.22559 x 10-1 | 7 | 6 | 53.85% | 13 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G51310 | VPS35C | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.9 x 10-6 | 67 | 4 | 94.37% | 71 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G51310 | VPS35C | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.61165 x 10-1 | 23 | 10 | 16 | 23 | 69.70% | 58.97% | 33 | 39 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.387106' Avg. expression score for this sample: '118.254' Avg. expression score in LCM sample: '34.349' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G51300 | ROP1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.76471 x 10-1 | 6 | 1 | 0 | 2 | 85.71% | 100.00% | 7 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.005697' Avg. expression score for this sample: '27.8624' Avg. expression score in LCM sample: '2.7926' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G51300 | ROP1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0942 x 10-2 | 13 | 1 | 0 | 12 | 92.86% | 100.00% | 14 | 12 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.005697' Avg. expression score for this sample: '33.6001' Avg. expression score in LCM sample: '2.7926' Tissue used: 'full endosperm' |
||||
| AT3G51300 | ROP1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 2 | 0 | 1 | 0 | 100.00% | 0.00% | 2 | 1 | TAIR8 |
Avg. embryo expression (dissected): '9.15177' Avg. embryo expression (LCM): '1.19306' |
|||
| AT3G51300 | ROP1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.72776 x 10-1 | 46 | 1 | 97.87% | 47 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G51300 | ROP1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.5065 x 10-2 | 128 | 0 | 100.00% | 128 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G51300 | ROP1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 9 | 0 | 100.00% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G51290 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.50198 x 10-1 | 15 | 6 | 71.43% | 21 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G51290 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.37561 x 10-1 | 5 | 1 | 83.33% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G51290 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.735 x 10-3 | 55 | 39 | 55 | 41 | 58.51% | 42.71% | 94 | 96 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.02034' Avg. expression score for this sample: '370.574' Avg. expression score in LCM sample: '203.463' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G51290 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.05875 x 10-1 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G51290 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.23565 x 10-1 | 28 | 46 | 39 | 30 | 37.84% | 43.48% | 74 | 69 | TAIR8 |
Avg. embryo expression (dissected): '396.214' Avg. embryo expression (LCM): '334.724' |
||||
| AT3G51290 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.29223 x 10-1 | 24 | 10 | 4 | 17 | 70.59% | 80.95% | 34 | 21 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.02034' Avg. expression score for this sample: '275.371' Avg. expression score in LCM sample: '203.463' Tissue used: 'full endosperm' |
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| AT3G51280 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 9.4636 x 10-2 | 140 | 84 | 149 | 238 | 62.50% | 61.50% | 224 | 387 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.151904' Avg. expression score for this sample: '226.353' Avg. expression score in LCM sample: '463.352' Tissue used: 'full endosperm' |
|||||
| AT3G51280 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.2796 x 10-2 | 937 | 695 | 259 | 178 | 57.41% | 40.73% | 1632 | 437 | TAIR8 |
Avg. embryo expression (dissected): '1700.64' Avg. embryo expression (LCM): '1065.21' |
||||
| AT3G51280 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.14471 x 10-1 | 86 | 34 | 71.67% | 120 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G51280 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.64 x 10-3 | 85 | 73 | 53.80% | 158 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G51280 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.83898 x 10-1 | 30 | 10 | 75.00% | 40 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G51280 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.04862 x 10-1 | 517 | 217 | 196 | 271 | 70.44% | 58.03% | 734 | 467 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.151904' Avg. expression score for this sample: '625.652' Avg. expression score in LCM sample: '463.352' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G51270 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.93457 x 10-1 | 59 | 16 | 30 | 24 | 78.67% | 44.44% | 75 | 54 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.935223' Avg. expression score for this sample: '411.963' Avg. expression score in LCM sample: '61.2021' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT3G51270 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.1842 x 10-1 | 81 | 26 | 75.70% | 107 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G51270 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 74 | 56 | 26 | 7 | 56.92% | 21.21% | 130 | 33 | TAIR8 |
Avg. embryo expression (dissected): '834.576' Avg. embryo expression (LCM): '753.515' |
||||
| AT3G51270 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.78286 x 10-1 | 93 | 24 | 42 | 54 | 79.49% | 56.25% | 117 | 96 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.935223' Avg. expression score for this sample: '386.769' Avg. expression score in LCM sample: '61.2021' Tissue used: 'full endosperm' |
|||||
| AT3G51270 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.00934 x 10-1 | 2 | 2 | 50.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G51270 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.7 x 10-7 | 140 | 19 | 88.05% | 159 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G51265 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G51265 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G51265 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G51265 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT3G51265 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT3G51265 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G51260 | PAD1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.7 x 10-10 | 1630 | 902 | 64.38% | 2532 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G51260 | PAD1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.031 x 10-3 | 748 | 515 | 181 | 134 | 59.22% | 42.54% | 1263 | 315 | TAIR8 |
Avg. embryo expression (dissected): '1596.81' Avg. embryo expression (LCM): '1538.66' |
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| AT3G51260 | PAD1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.8 x 10-13 | 741 | 141 | 295 | 731 | 84.01% | 71.25% | 882 | 1026 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '7.9e-07' Avg. expression score for this sample: '925.936' Avg. expression score in LCM sample: '733' Tissue used: 'full endosperm' |
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| AT3G51260 | PAD1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.25213 x 10-1 | 173 | 70 | 71.19% | 243 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G51260 | PAD1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.7 x 10-29 | 1987 | 375 | 84.12% | 2362 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G51260 | PAD1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 9.44173 x 10-1 | 747 | 254 | 360 | 472 | 74.63% | 56.73% | 1001 | 832 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '7.9e-07' Avg. expression score for this sample: '1186.51' Avg. expression score in LCM sample: '733' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G51250 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.484 x 10-3 | 1065 | 305 | 521 | 904 | 77.74% | 63.44% | 1370 | 1425 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '3.3e-34' Avg. expression score for this sample: '554.132' Avg. expression score in LCM sample: '366.11' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G51250 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 0.0 | 1529 | 308 | 413 | 1479 | 83.23% | 78.17% | 1837 | 1892 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '3.3e-34' Avg. expression score for this sample: '528.358' Avg. expression score in LCM sample: '366.11' Tissue used: 'full endosperm' |
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| AT3G51250 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.8 x 10-5 | 479 | 238 | 166 | 112 | 66.81% | 40.29% | 717 | 278 | TAIR8 |
Avg. embryo expression (dissected): '320.135' Avg. embryo expression (LCM): '170.91' |
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| AT3G51250 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.7 x 10-16 | 3355 | 1480 | 69.39% | 4835 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G51250 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 4022 | 641 | 86.25% | 4663 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G51250 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.1 x 10-5 | 461 | 86 | 84.28% | 547 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G51240 | F3H | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.68993 x 10-1 | 97 | 31 | 75.78% | 128 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G51240 | F3H | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 1084 | 2 | 99.82% | 1086 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G51240 | F3H | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.60657 x 10-1 | 104 | 47 | 29 | 86 | 68.87% | 74.78% | 151 | 115 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000762' Avg. expression score for this sample: '143.511' Avg. expression score in LCM sample: '84.2631' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G51240 | F3H | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 x 10-13 | 129 | 3 | 97.73% | 132 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT3G51240 | F3H | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 9.81 x 10-4 | 60 | 141 | 10 | 20 | 29.85% | 66.67% | 201 | 30 | TAIR8 |
Avg. embryo expression (dissected): '181.158' Avg. embryo expression (LCM): '155.726' |
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| AT3G51240 | F3H | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.399 x 10-3 | 363 | 156 | 153 | 467 | 69.94% | 75.32% | 519 | 620 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000762' Avg. expression score for this sample: '595.873' Avg. expression score in LCM sample: '84.2631' Tissue used: 'full endosperm' |
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| AT3G51238 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.21643 x 10-1 | 313 | 185 | 131 | 420 | 62.85% | 76.23% | 498 | 551 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.124217' Avg. expression score for this sample: '423.477' Avg. expression score in LCM sample: '71.329' Tissue used: 'full endosperm' |
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| AT3G51238 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.5873 x 10-2 | 52 | 107 | 15 | 24 | 32.70% | 61.54% | 159 | 39 | TAIR8 |
Avg. embryo expression (dissected): '130.41' Avg. embryo expression (LCM): '83.5271' |
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| AT3G51238 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.8 x 10-14 | 109 | 2 | 98.20% | 111 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G51238 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 1038 | 1 | 99.90% | 1039 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G51238 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.7041 x 10-2 | 78 | 21 | 78.79% | 99 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G51238 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.36494 x 10-1 | 70 | 39 | 29 | 76 | 64.22% | 72.38% | 109 | 105 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.124217' Avg. expression score for this sample: '102.575' Avg. expression score in LCM sample: '71.329' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G51230 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '65.8264' Avg. expression score in LCM sample: '100.078' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G51230 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G51230 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '71.5825' Avg. embryo expression (LCM): '54.881' |
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| AT3G51230 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '85.8751' Avg. expression score in LCM sample: '100.078' Tissue used: 'full endosperm' |
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| AT3G51230 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G51230 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G51220 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT3G51220 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT3G51220 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.047826' Avg. expression score for this sample: '.985512' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT3G51220 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.6584 x 10-2 | 4 | 0 | 0 | 8 | 100.00% | 100.00% | 4 | 8 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.047826' Avg. expression score for this sample: '13.6449' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |