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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G51644 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51644 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G51642 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G51642 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G51642 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G51642 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51642 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51642 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51640 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.875 x 10-3 53 2 96.36% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51640 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.72044 x 10-1 20 7 7 33 74.07% 82.50% 27 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.125557'
Avg. expression score for this sample: '1010.56'
Avg. expression score in LCM sample: '291.195'
Tissue used: 'full endosperm'
AT3G51640 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.50391 x 10-1 55 12 82.09% 67 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 1 4 8 85.71% 66.67% 7 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.125557'
Avg. expression score for this sample: '988.713'
Avg. expression score in LCM sample: '291.195'
Tissue used: 'pure endosperm, no chalazal'
AT3G51640 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 6 6 1 3 50.00% 75.00% 12 4 TAIR8 Avg. embryo expression (dissected): '822.602'
Avg. embryo expression (LCM): '390.182'
AT3G51636 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51636 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G51636 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51636 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51636 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G51636 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G51632 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.36076 x 10-1 24 8 8 14 75.00% 63.64% 32 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '314.284'
Avg. expression score in LCM sample: '159.913'
Tissue used: 'full endosperm'
AT3G51632 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.47527 x 10-1 10 5 4 1 66.67% 20.00% 15 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '213.681'
Avg. expression score in LCM sample: '159.913'
Tissue used: 'pure endosperm, no chalazal'
AT3G51632 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 6 4 5 1 60.00% 16.67% 10 6 TAIR8 Avg. embryo expression (dissected): '150.815'
Avg. embryo expression (LCM): '133.724'
AT3G51632 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.17245 x 10-1 37 22 62.71% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51632 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2104 x 10-2 62 11 84.93% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51632 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.46822 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51630 WNK5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.12239 x 10-1 17 4 80.95% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51630 WNK5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.4 x 10-8 236 26 90.08% 262 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51630 WNK5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.507 x 10-2 104 28 31 79 78.79% 71.82% 132 110 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.089976'
Avg. expression score for this sample: '161.34'
Avg. expression score in LCM sample: '61.2462'
Tissue used: 'full endosperm'
AT3G51630 WNK5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.05254 x 10-1 160 65 71.11% 225 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51630 WNK5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 44 19 21 38 69.84% 64.41% 63 59 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.089976'
Avg. expression score for this sample: '102.877'
Avg. expression score in LCM sample: '61.2462'
Tissue used: 'pure endosperm, no chalazal'
AT3G51630 WNK5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.21552 x 10-1 18 21 9 2 46.15% 18.18% 39 11 TAIR8 Avg. embryo expression (dissected): '77.4582'
Avg. embryo expression (LCM): '43.6034'
AT3G51620 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 90 94 38 42 48.91% 52.50% 184 80 TAIR8 Avg. embryo expression (dissected): '105.913'
Avg. embryo expression (LCM): '61.9515'
AT3G51620 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.13 x 10-3 374 115 76.48% 489 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.00082 x 10-1 131 53 73 152 71.20% 67.56% 184 225 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.214407'
Avg. expression score for this sample: '108.172'
Avg. expression score in LCM sample: '67.8015'
Tissue used: 'pure endosperm, no chalazal'
AT3G51620 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1 x 10-10 517 106 82.99% 623 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51620 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.008 x 10-3 49 8 85.96% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.22193 x 10-1 212 75 133 257 73.87% 65.90% 287 390 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.214407'
Avg. expression score for this sample: '135.399'
Avg. expression score in LCM sample: '67.8015'
Tissue used: 'full endosperm'
AT3G51610 NPU endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 3 100.00% 100.00% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.1'
Avg. expression score for this sample: '153.107'
Avg. expression score in LCM sample: '49.723'
Tissue used: 'full endosperm'
AT3G51610 NPU endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 3 100.00% 100.00% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.1'
Avg. expression score for this sample: '104.992'
Avg. expression score in LCM sample: '49.723'
Tissue used: 'pure endosperm, no chalazal'
AT3G51610 NPU embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '80.0369'
Avg. embryo expression (LCM): '144.7'
AT3G51610 NPU endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.13341 x 10-1 25 6 80.65% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51610 NPU endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51610 NPU endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 19 1 95.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51600 LTP5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.473 x 10-2 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51600 LTP5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.58752 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51600 LTP5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.8917 x 10-1 17 7 5 1 70.83% 16.67% 24 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.715251'
Avg. expression score for this sample: '111.139'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G51600 LTP5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51600 LTP5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 17 9 4 5 65.38% 55.56% 26 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.715251'
Avg. expression score for this sample: '97.0482'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G51600 LTP5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.106 x 10-3 133 42 42 18 76.00% 30.00% 175 60 TAIR8 Avg. embryo expression (dissected): '925.805'
Avg. embryo expression (LCM): '63.6343'
AT3G51590 LTP12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.747'
Avg. embryo expression (LCM): '0'
AT3G51590 LTP12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51590 LTP12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G51590 LTP12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51590 LTP12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51590 LTP12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.333816'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G51580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.52 x 10-4 212 46 78 208 82.17% 72.73% 258 286 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000135'
Avg. expression score for this sample: '322.968'
Avg. expression score in LCM sample: '291.063'
Tissue used: 'full endosperm'
AT3G51580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.67329 x 10-1 115 25 40 51 82.14% 56.04% 140 91 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000135'
Avg. expression score for this sample: '545.511'
Avg. expression score in LCM sample: '291.063'
Tissue used: 'pure endosperm, no chalazal'
AT3G51580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.15949 x 10-1 38 20 12 6 65.52% 33.33% 58 18 TAIR8 Avg. embryo expression (dissected): '293.669'
Avg. embryo expression (LCM): '111.985'
AT3G51580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.95474 x 10-1 461 162 74.00% 623 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.6 x 10-15 513 47 91.61% 560 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.79508 x 10-1 32 14 69.57% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51570 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.09999 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51570 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8114 x 10-1 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.88953 x 10-1 37 4 15 22 90.24% 59.46% 41 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.251668'
Avg. expression score for this sample: '44.4383'
Avg. expression score in LCM sample: '17.9902'
Tissue used: 'full endosperm'
AT3G51570 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.88145 x 10-1 12 9 57.14% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 16 4 7 9 80.00% 56.25% 20 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.251668'
Avg. expression score for this sample: '28.796'
Avg. expression score in LCM sample: '17.9902'
Tissue used: 'pure endosperm, no chalazal'
AT3G51570 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 1 1 0 80.00% 0.00% 5 1 TAIR8 Avg. embryo expression (dissected): '10.2895'
Avg. embryo expression (LCM): '8.53983'
AT3G51560 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28571 x 10-1 0 2 1 0 0.00% 0.00% 2 1 TAIR8 Avg. embryo expression (dissected): '2.41536'
Avg. embryo expression (LCM): '0'
AT3G51560 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.2791 x 10-2 23 2 92.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 1 3 50.00% 75.00% 2 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.90752'
Avg. expression score in LCM sample: '8.21614'
Tissue used: 'pure endosperm, no chalazal'
AT3G51560 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.69802 x 10-1 2 5 28.57% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51560 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 2 0 0 66.67% 6 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '12.4663'
Avg. expression score in LCM sample: '8.21614'
Tissue used: 'full endosperm'
AT3G51550 FER endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 1522 803 512 3176 65.46% 86.12% 2325 3688 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1766.1'
Avg. expression score in LCM sample: '429.017'
Tissue used: 'full endosperm'
AT3G51550 FER endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.1 x 10-7 800 525 310 1442 60.38% 82.31% 1325 1752 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1119.38'
Avg. expression score in LCM sample: '429.017'
Tissue used: 'pure endosperm, no chalazal'
AT3G51550 FER embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.1719 x 10-2 578 865 189 346 40.06% 64.67% 1443 535 TAIR8 Avg. embryo expression (dissected): '1039.47'
Avg. embryo expression (LCM): '462.344'
AT3G51550 FER endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 2079 32 98.48% 2111 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51550 FER endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.7 x 10-24 804 89 90.03% 893 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51550 FER endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2480 99 96.16% 2579 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51540 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51540 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.21739 x 10-1 3 0 1 9 100.00% 90.00% 3 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.389847'
Avg. expression score for this sample: '9.5293'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G51540 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.389847'
Avg. expression score for this sample: '2.16229'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G51540 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.885126'
Avg. embryo expression (LCM): '0'
AT3G51530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.35095 x 10-1 12 2 4 5 85.71% 55.56% 14 9 TAIR8 Avg. embryo expression (dissected): '73.9222'
Avg. embryo expression (LCM): '98.1453'
AT3G51530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.76205 x 10-1 63 26 70.79% 89 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 9 3 1 1 75.00% 50.00% 12 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.473818'
Avg. expression score for this sample: '38.0609'
Avg. expression score in LCM sample: '32.2031'
Tissue used: 'pure endosperm, no chalazal'
AT3G51530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.80795 x 10-1 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.4 x 10-9 150 5 96.77% 155 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.45755 x 10-1 30 12 16 43 71.43% 72.88% 42 59 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.473818'
Avg. expression score for this sample: '71.3973'
Avg. expression score in LCM sample: '32.2031'
Tissue used: 'full endosperm'
AT3G51520 DGAT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '103.497'
Avg. expression score in LCM sample: '63.3774'
Tissue used: 'full endosperm'
AT3G51520 DGAT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '121.008'
Avg. expression score in LCM sample: '63.3774'
Tissue used: 'pure endosperm, no chalazal'
AT3G51520 DGAT2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '102.153'
Avg. embryo expression (LCM): '63.6469'
AT3G51520 DGAT2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51520 DGAT2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51520 DGAT2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51510 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'