Displaying data sets 72501 - 72600 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G51970 ASAT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 2 66.67% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.751642'
Avg. expression score for this sample: '21.6611'
Avg. expression score in LCM sample: '4.73273'
Tissue used: 'pure endosperm, no chalazal'
AT3G51970 ASAT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.33718 x 10-1 12 1 4 4 92.31% 50.00% 13 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.751642'
Avg. expression score for this sample: '61.001'
Avg. expression score in LCM sample: '4.73273'
Tissue used: 'full endosperm'
AT3G51970 ASAT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51970 ASAT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51960 BZIP24 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51960 BZIP24 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51960 BZIP24 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51960 BZIP24 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.97318'
Avg. embryo expression (LCM): '0'
AT3G51960 BZIP24 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.53326'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G51960 BZIP24 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.259266'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G51950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 6 5 10 57.14% 66.67% 14 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.316964'
Avg. expression score for this sample: '158.265'
Avg. expression score in LCM sample: '51.1194'
Tissue used: 'pure endosperm, no chalazal'
AT3G51950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.92217 x 10-1 24 3 8 19 88.89% 70.37% 27 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.316964'
Avg. expression score for this sample: '170.568'
Avg. expression score in LCM sample: '51.1194'
Tissue used: 'full endosperm'
AT3G51950 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.5711 x 10-2 17 1 94.44% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51950 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 8 3 72.73% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51950 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 24 33 5 12 42.11% 70.59% 57 17 TAIR8 Avg. embryo expression (dissected): '433.405'
Avg. embryo expression (LCM): '371.294'
AT3G51950 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0315 x 10-2 29 2 93.55% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51940 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.4 x 10-17 371 33 91.83% 404 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51940 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.8545 x 10-2 100 57 37 31 63.69% 45.59% 157 68 TAIR8 Avg. embryo expression (dissected): '483.281'
Avg. embryo expression (LCM): '195.901'
AT3G51940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.68 x 10-4 235 65 51 163 78.33% 76.17% 300 214 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00645'
Avg. expression score for this sample: '599.964'
Avg. expression score in LCM sample: '176.963'
Tissue used: 'full endosperm'
AT3G51940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 151 54 85 126 73.66% 59.72% 205 211 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00645'
Avg. expression score for this sample: '675.903'
Avg. expression score in LCM sample: '176.963'
Tissue used: 'pure endosperm, no chalazal'
AT3G51940 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.87816 x 10-1 34 8 80.95% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51940 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.16378 x 10-1 193 76 71.75% 269 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51930 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.195 x 10-3 6 13 31.58% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51930 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.4687 x 10-2 20 5 80.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51930 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.10408 x 10-1 327 331 136 111 49.70% 44.94% 658 247 TAIR8 Avg. embryo expression (dissected): '743.369'
Avg. embryo expression (LCM): '459.606'
AT3G51930 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.21452 x 10-1 29 9 76.32% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.11845 x 10-1 238 140 89 154 62.96% 63.37% 378 243 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.115215'
Avg. expression score for this sample: '309.389'
Avg. expression score in LCM sample: '381.734'
Tissue used: 'pure endosperm, no chalazal'
AT3G51930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.7855 x 10-1 55 55 71 162 50.00% 69.53% 110 233 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.115215'
Avg. expression score for this sample: '116.139'
Avg. expression score in LCM sample: '381.734'
Tissue used: 'full endosperm'
AT3G51920 CAM9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.98381 x 10-1 3 0 8 0 100.00% 0.00% 3 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.198381'
Avg. expression score for this sample: '12.9596'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G51920 CAM9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.198381'
Avg. expression score for this sample: '4.44358'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G51920 CAM9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51920 CAM9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51920 CAM9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.28205 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51920 CAM9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 0 0 66.67% 3 0 TAIR8 Avg. embryo expression (dissected): '22.3722'
Avg. embryo expression (LCM): '0'
AT3G51910 HSFA7A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.54117 x 10-1 23 0 17 0 100.00% 0.00% 23 17 TAIR8 Avg. embryo expression (dissected): '1103.1'
Avg. embryo expression (LCM): '1.53215'
AT3G51910 HSFA7A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.4 x 10-5 20 0 100.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51910 HSFA7A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.57718 x 10-1 43 0 25 0 100.00% 0.00% 43 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.184341'
Avg. expression score for this sample: '1612.11'
Avg. expression score in LCM sample: '1.79315'
Tissue used: 'pure endosperm, no chalazal'
AT3G51910 HSFA7A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.67321 x 10-1 27 0 26 0 100.00% 0.00% 27 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.184341'
Avg. expression score for this sample: '956.037'
Avg. expression score in LCM sample: '1.79315'
Tissue used: 'full endosperm'
AT3G51910 HSFA7A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.2623 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51910 HSFA7A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.181 x 10-3 0 7 0.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51895 SULTR3;1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT3G51895 SULTR3;1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 14 1 93.33% 15 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT3G51895 SULTR3;1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.041 x 10-3 67 0 100.00% 67 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT3G51895 SULTR3;1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '11.4492'
Avg. embryo expression (LCM): '1.67029'
AT3G51895 SULTR3;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 5.1 x 10-6 43 1 4 38 97.73% 90.48% 44 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000454'
Avg. expression score for this sample: '278.569'
Avg. expression score in LCM sample: '131.782'
Tissue used: 'full endosperm'
AT3G51895 SULTR3;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 6.69921 x 10-1 2 2 4 3 50.00% 42.86% 4 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000454'
Avg. expression score for this sample: '96.6792'
Avg. expression score in LCM sample: '131.782'
Tissue used: 'pure endosperm, no chalazal'
AT3G51890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.09615 x 10-1 48 17 33 36 73.85% 52.17% 65 69 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.35215'
Avg. expression score for this sample: '1121.86'
Avg. expression score in LCM sample: '135.25'
Tissue used: 'pure endosperm, no chalazal'
AT3G51890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.98194 x 10-1 61 17 47 47 78.21% 50.00% 78 94 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.35215'
Avg. expression score for this sample: '688.15'
Avg. expression score in LCM sample: '135.25'
Tissue used: 'full endosperm'
AT3G51890 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.9004 x 10-2 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51890 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 13 8 61.90% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51890 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.23544 x 10-1 30 21 8 4 58.82% 33.33% 51 12 TAIR8 Avg. embryo expression (dissected): '729.026'
Avg. embryo expression (LCM): '222.865'
AT3G51890 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3675 x 10-2 44 11 80.00% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51880 HMGB1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1626 165 90.79% 1791 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51880 HMGB1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.1783 x 10-2 666 512 135 104 56.54% 43.51% 1178 239 TAIR8 Avg. embryo expression (dissected): '718.99'
Avg. embryo expression (LCM): '433.472'
AT3G51880 HMGB1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.134 x 10-3 1340 505 442 921 72.63% 67.57% 1845 1363 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.0e-39'
Avg. expression score for this sample: '1141.41'
Avg. expression score in LCM sample: '202.287'
Tissue used: 'pure endosperm, no chalazal'
AT3G51880 HMGB1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 2296 677 1054 3395 77.23% 76.31% 2973 4449 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.0e-39'
Avg. expression score for this sample: '1852.59'
Avg. expression score in LCM sample: '202.287'
Tissue used: 'full endosperm'
AT3G51880 HMGB1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.148 x 10-2 383 102 78.97% 485 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51880 HMGB1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 1809 243 88.16% 2052 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51870 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51870 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '16.997'
Avg. expression score in LCM sample: '5.92326'
Tissue used: 'pure endosperm, no chalazal'
AT3G51870 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '50.1698'
Avg. embryo expression (LCM): '80.9651'
AT3G51870 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '40.2352'
Avg. expression score in LCM sample: '5.92326'
Tissue used: 'full endosperm'
AT3G51860 CAX3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 9 6 5 10 60.00% 66.67% 15 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1034.82'
Avg. expression score in LCM sample: '82.7052'
Tissue used: 'full endosperm'
AT3G51860 CAX3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.02581 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51860 CAX3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.6007 x 10-2 26 2 92.86% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51860 CAX3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.56 x 10-3 24 0 100.00% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51860 CAX3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.66667 x 10-1 4 0 0 1 100.00% 100.00% 4 1 TAIR8 Avg. embryo expression (dissected): '414.982'
Avg. embryo expression (LCM): '46.8812'
AT3G51860 CAX3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 2 100.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '542.174'
Avg. expression score in LCM sample: '82.7052'
Tissue used: 'pure endosperm, no chalazal'
AT3G51850 CPK13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.44356 x 10-1 28 12 13 44 70.00% 77.19% 40 57 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000107'
Avg. expression score for this sample: '583.556'
Avg. expression score in LCM sample: '513.707'
Tissue used: 'pure endosperm, no chalazal'
AT3G51850 CPK13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.31499 x 10-1 24 22 9 12 52.17% 57.14% 46 21 TAIR8 Avg. embryo expression (dissected): '585.743'
Avg. embryo expression (LCM): '522.738'
AT3G51850 CPK13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.0 x 10-11 237 13 94.80% 250 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51850 CPK13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.23 x 10-4 132 44 58 226 75.00% 79.58% 176 284 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000107'
Avg. expression score for this sample: '641.83'
Avg. expression score in LCM sample: '513.707'
Tissue used: 'full endosperm'
AT3G51850 CPK13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.092 x 10-2 112 16 87.50% 128 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51850 CPK13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.42549 x 10-1 31 4 88.57% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51840 ACX4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.4 x 10-6 354 84 80.82% 438 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51840 ACX4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.9 x 10-12 747 166 81.82% 913 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51840 ACX4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.4 x 10-26 692 98 87.59% 790 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51840 ACX4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.15864 x 10-1 394 430 37 61 47.82% 62.24% 824 98 TAIR8 Avg. embryo expression (dissected): '437.89'
Avg. embryo expression (LCM): '274.769'
AT3G51840 ACX4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.62116 x 10-1 905 470 407 912 65.82% 69.14% 1375 1319 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.6e-10'
Avg. expression score for this sample: '930.373'
Avg. expression score in LCM sample: '190.25'
Tissue used: 'pure endosperm, no chalazal'
AT3G51840 ACX4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.1 x 10-13 1373 563 862 2518 70.92% 74.50% 1936 3380 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.6e-10'
Avg. expression score for this sample: '1275.42'
Avg. expression score in LCM sample: '190.25'
Tissue used: 'full endosperm'
AT3G51830 SAC8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '79.3617'
Avg. expression score in LCM sample: '33.6876'
Tissue used: 'full endosperm'
AT3G51830 SAC8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51830 SAC8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51830 SAC8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '76.5881'
Avg. expression score in LCM sample: '33.6876'
Tissue used: 'pure endosperm, no chalazal'
AT3G51830 SAC8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '79.9958'
Avg. embryo expression (LCM): '41.0289'
AT3G51830 SAC8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51820 G4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51820 G4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '121.737'
Avg. embryo expression (LCM): '128.7'
AT3G51820 G4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '94.8039'
Avg. expression score in LCM sample: '28.999'
Tissue used: 'pure endosperm, no chalazal'
AT3G51820 G4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '87.538'
Avg. expression score in LCM sample: '28.999'
Tissue used: 'full endosperm'
AT3G51820 G4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.4 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51820 G4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51810 EM1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51810 EM1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51810 EM1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '18.6127'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G51810 EM1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.82992'
Avg. embryo expression (LCM): '0'
AT3G51810 EM1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G51810 EM1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.09211'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'