Displaying data sets 70901 - 71000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G54350 emb1967 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '142.982'
Avg. expression score in LCM sample: '37.1416'
Tissue used: 'full endosperm'
AT3G54350 emb1967 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54340 AP3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 13 0 100.00% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54340 AP3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.70526 x 10-1 1028 4 99.61% 1032 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54340 AP3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 4.28571 x 10-1 3 0 0 0 100.00% 3 0 TAIR8 Avg. embryo expression (dissected): '17.5699'
Avg. embryo expression (LCM): '0'
AT3G54340 AP3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.12891 x 10-1 416 0 100.00% 416 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54340 AP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.6 x 10-4 19 0 0 14 100.00% 100.00% 19 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.2e-22'
Avg. expression score for this sample: '108.164'
Avg. expression score in LCM sample: '5.70279'
Tissue used: 'pure endosperm, no chalazal'
AT3G54340 AP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.6 x 10-18 80 2 0 96 97.56% 100.00% 82 96 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.2e-22'
Avg. expression score for this sample: '207.265'
Avg. expression score in LCM sample: '5.70279'
Tissue used: 'full endosperm'
AT3G54320 WRI1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 6 3 3 10 66.67% 76.92% 9 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.787875'
Avg. expression score for this sample: '264.447'
Avg. expression score in LCM sample: '277.467'
Tissue used: 'full endosperm'
AT3G54320 WRI1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54320 WRI1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 2 1 4 60.00% 80.00% 5 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.787875'
Avg. expression score for this sample: '446.385'
Avg. expression score in LCM sample: '277.467'
Tissue used: 'pure endosperm, no chalazal'
AT3G54320 WRI1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 1 1 2 66.67% 66.67% 3 3 TAIR8 Avg. embryo expression (dissected): '385.604'
Avg. embryo expression (LCM): '571.239'
AT3G54320 WRI1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.53094 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54320 WRI1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.8039 x 10-2 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G54310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G54310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.168934'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G54310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54300 VAMP727 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.97173 x 10-1 30 4 88.24% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54300 VAMP727 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.7 x 10-10 242 14 94.53% 256 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54300 VAMP727 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 28 34 7 15 45.16% 68.18% 62 22 TAIR8 Avg. embryo expression (dissected): '345.359'
Avg. embryo expression (LCM): '191.531'
AT3G54300 VAMP727 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.2245 218 48 81.95% 266 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54300 VAMP727 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.38814 x 10-1 45 18 15 56 71.43% 78.87% 63 71 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000063'
Avg. expression score for this sample: '527.729'
Avg. expression score in LCM sample: '137.617'
Tissue used: 'pure endosperm, no chalazal'
AT3G54300 VAMP727 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.14 x 10-4 95 38 41 202 71.43% 83.13% 133 243 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000063'
Avg. expression score for this sample: '788.657'
Avg. expression score in LCM sample: '137.617'
Tissue used: 'full endosperm'
AT3G54290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.8 x 10-9 491 74 162 350 86.90% 68.36% 565 512 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.9e-06'
Avg. expression score for this sample: '379.491'
Avg. expression score in LCM sample: '158.649'
Tissue used: 'full endosperm'
AT3G54290 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.6291 x 10-1 46 23 66.67% 69 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.16808 x 10-1 160 22 115 73 87.91% 38.83% 182 188 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.9e-06'
Avg. expression score for this sample: '173.759'
Avg. expression score in LCM sample: '158.649'
Tissue used: 'pure endosperm, no chalazal'
AT3G54290 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.55751 x 10-1 29 9 8 4 76.32% 33.33% 38 12 TAIR8 Avg. embryo expression (dissected): '39.0102'
Avg. embryo expression (LCM): '59.6784'
AT3G54290 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-29 537 30 94.71% 567 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54290 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.33618 x 10-1 175 46 79.19% 221 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54280 RGD3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.7514 x 10-2 87 20 81.31% 107 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54280 RGD3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.8746 x 10-1 39 36 16 17 52.00% 51.52% 75 33 TAIR8 Avg. embryo expression (dissected): '154.867'
Avg. embryo expression (LCM): '113.542'
AT3G54280 RGD3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.17177 x 10-1 46 26 26 42 63.89% 61.76% 72 68 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.177918'
Avg. expression score for this sample: '132.52'
Avg. expression score in LCM sample: '79.6921'
Tissue used: 'pure endosperm, no chalazal'
AT3G54280 RGD3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.6 x 10-7 152 16 90.48% 168 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54280 RGD3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.0901 x 10-2 68 33 35 141 67.33% 80.11% 101 176 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.177918'
Avg. expression score for this sample: '115.384'
Avg. expression score in LCM sample: '79.6921'
Tissue used: 'full endosperm'
AT3G54280 RGD3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.72603 x 10-1 19 9 67.86% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 8 4 66.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.93631 x 10-1 42 13 76.36% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 17 15 5 1 53.12% 16.67% 32 6 TAIR8 Avg. embryo expression (dissected): '53.83'
Avg. embryo expression (LCM): '65.7944'
AT3G54270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.54 x 10-4 34 1 97.14% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.76471 x 10-1 5 0 1 3 100.00% 75.00% 5 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.71136'
Avg. expression score in LCM sample: '4.27709'
Tissue used: 'pure endosperm, no chalazal'
AT3G54270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 43 12 30 39 78.18% 56.52% 55 69 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '55.1154'
Avg. expression score in LCM sample: '4.27709'
Tissue used: 'full endosperm'
AT3G54260 TBL36 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.49447 x 10-1 14 3 3 3 82.35% 50.00% 17 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.635353'
Avg. expression score for this sample: '31.9715'
Avg. expression score in LCM sample: '18.9603'
Tissue used: 'full endosperm'
AT3G54260 TBL36 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.72727 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54260 TBL36 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.31094 x 10-1 14 1 4 1 93.33% 20.00% 15 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.635353'
Avg. expression score for this sample: '39.044'
Avg. expression score in LCM sample: '18.9603'
Tissue used: 'pure endosperm, no chalazal'
AT3G54260 TBL36 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.50034 x 10-1 19 9 3 0 67.86% 0.00% 28 3 TAIR8 Avg. embryo expression (dissected): '89.5412'
Avg. embryo expression (LCM): '93.1721'
AT3G54260 TBL36 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.72727 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54260 TBL36 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.316 x 10-3 38 3 92.68% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.08285 x 10-1 16 11 4 3 59.26% 42.86% 27 7 TAIR8 Avg. embryo expression (dissected): '125.454'
Avg. embryo expression (LCM): '91.7906'
AT3G54250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.45287 x 10-1 21 6 15 16 77.78% 51.61% 27 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.71823'
Avg. expression score for this sample: '102.209'
Avg. expression score in LCM sample: '89.3486'
Tissue used: 'pure endosperm, no chalazal'
AT3G54250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-5 72 5 93.51% 77 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.39189 x 10-1 33 9 19 39 78.57% 67.24% 42 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.71823'
Avg. expression score for this sample: '143.976'
Avg. expression score in LCM sample: '89.3486'
Tissue used: 'full endosperm'
AT3G54250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 8 3 72.73% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '10.9608'
Avg. embryo expression (LCM): '2.38613'
AT3G54240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.43463'
Avg. expression score in LCM sample: '2.7926'
Tissue used: 'pure endosperm, no chalazal'
AT3G54240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.22692'
Avg. expression score in LCM sample: '2.7926'
Tissue used: 'full endosperm'
AT3G54230 SUA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.5 x 10-7 466 122 168 469 79.25% 73.63% 588 637 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000265'
Avg. expression score for this sample: '255.771'
Avg. expression score in LCM sample: '133.736'
Tissue used: 'full endosperm'
AT3G54230 SUA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.1 x 10-6 140 19 88.05% 159 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54230 SUA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 386 207 189 404 65.09% 68.13% 593 593 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000265'
Avg. expression score for this sample: '303.553'
Avg. expression score in LCM sample: '133.736'
Tissue used: 'pure endosperm, no chalazal'
AT3G54230 SUA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.6645 x 10-1 258 281 55 95 47.87% 63.33% 539 150 TAIR8 Avg. embryo expression (dissected): '316.767'
Avg. embryo expression (LCM): '200.334'
AT3G54230 SUA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.0 x 10-20 611 86 87.66% 697 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54230 SUA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.4 x 10-5 554 145 79.26% 699 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54220 SCR endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.6633 x 10-2 185 66 73.71% 251 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54220 SCR embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.18643 x 10-1 541 491 162 165 52.42% 50.46% 1032 327 TAIR8 Avg. embryo expression (dissected): '1654.87'
Avg. embryo expression (LCM): '1296.94'
AT3G54220 SCR endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.56575 x 10-1 166 99 74 143 62.64% 65.90% 265 217 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.544218'
Avg. expression score for this sample: '364.355'
Avg. expression score in LCM sample: '79.1483'
Tissue used: 'pure endosperm, no chalazal'
AT3G54220 SCR endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.6 x 10-8 596 172 77.60% 768 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54220 SCR endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.77668 x 10-1 682 258 369 672 72.55% 64.55% 940 1041 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.544218'
Avg. expression score for this sample: '692.935'
Avg. expression score in LCM sample: '79.1483'
Tissue used: 'full endosperm'
AT3G54220 SCR endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.78306 x 10-1 144 67 68.25% 211 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1264.44'
Avg. embryo expression (LCM): '680.26'
AT3G54210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '486.309'
Avg. expression score in LCM sample: '84.66'
Tissue used: 'pure endosperm, no chalazal'
AT3G54210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '235.412'
Avg. expression score in LCM sample: '84.66'
Tissue used: 'full endosperm'
AT3G54200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.858 x 10-3 24 12 3 57 66.67% 95.00% 36 60 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002303'
Avg. expression score for this sample: '404.643'
Avg. expression score in LCM sample: '4.9238'
Tissue used: 'full endosperm'
AT3G54200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.23077 x 10-1 0 1 0 7 0.00% 100.00% 1 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002303'
Avg. expression score for this sample: '151.59'
Avg. expression score in LCM sample: '4.9238'
Tissue used: 'pure endosperm, no chalazal'
AT3G54200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 2 0 0 33.33% 3 0 TAIR8 Avg. embryo expression (dissected): '53.3157'
Avg. embryo expression (LCM): '16.8411'
AT3G54200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.57 x 10-4 58 0 100.00% 58 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 69 12 85.19% 81 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 10 4 71.43% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.72548 x 10-1 4 9 2 1 30.77% 33.33% 13 3 TAIR8 Avg. embryo expression (dissected): '144.326'
Avg. embryo expression (LCM): '146.659'
AT3G54190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.37428 x 10-1 3 3 5 8 50.00% 61.54% 6 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.819252'
Avg. expression score for this sample: '117.088'
Avg. expression score in LCM sample: '21.65'
Tissue used: 'pure endosperm, no chalazal'
AT3G54190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.6765 x 10-2 13 0 100.00% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.20195 x 10-1 8 3 2 12 72.73% 85.71% 11 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.819252'
Avg. expression score for this sample: '96.4472'
Avg. expression score in LCM sample: '21.65'
Tissue used: 'full endosperm'
AT3G54190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54180 CDKB1;1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54180 CDKB1;1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54180 CDKB1;1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '74.622'
Avg. embryo expression (LCM): '93.147'
AT3G54180 CDKB1;1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54180 CDKB1;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 1 1 100.00% 50.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '41.8537'
Avg. expression score in LCM sample: '124.932'
Tissue used: 'full endosperm'
AT3G54180 CDKB1;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '52.6921'
Avg. expression score in LCM sample: '124.932'
Tissue used: 'pure endosperm, no chalazal'
AT3G54170 FIP37 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '54.7918'
Avg. expression score in LCM sample: '14.11'
Tissue used: 'pure endosperm, no chalazal'
AT3G54170 FIP37 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 1 0 2 66.67% 100.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '113.51'
Avg. expression score in LCM sample: '14.11'
Tissue used: 'full endosperm'