Displaying data sets 70701 - 70800 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G54670 TTN8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.15338 x 10-1 238 151 112 298 61.18% 72.68% 389 410 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.2e-06'
Avg. expression score for this sample: '167.267'
Avg. expression score in LCM sample: '56.6752'
Tissue used: 'pure endosperm, no chalazal'
AT3G54670 TTN8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.2 x 10-10 714 157 81.97% 871 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54670 TTN8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.2 x 10-7 705 300 391 1176 70.15% 75.05% 1005 1567 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.2e-06'
Avg. expression score for this sample: '402.915'
Avg. expression score in LCM sample: '56.6752'
Tissue used: 'full endosperm'
AT3G54670 TTN8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.35382 x 10-1 295 370 84 131 44.36% 60.93% 665 215 TAIR8 Avg. embryo expression (dissected): '265.192'
Avg. embryo expression (LCM): '256.81'
AT3G54660 GR embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.95177 x 10-1 60 51 9 15 54.05% 62.50% 111 24 TAIR8 Avg. embryo expression (dissected): '192.62'
Avg. embryo expression (LCM): '230.475'
AT3G54660 GR endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.11 x 10-4 102 25 80.31% 127 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54660 GR endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.52981 x 10-1 22 10 68.75% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54660 GR endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.73708 x 10-1 82 39 64 92 67.77% 58.97% 121 156 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.180639'
Avg. expression score for this sample: '133.915'
Avg. expression score in LCM sample: '77.3551'
Tissue used: 'full endosperm'
AT3G54660 GR endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.88713 x 10-1 96 55 63.58% 151 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54660 GR endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.79298 x 10-1 28 18 14 13 60.87% 48.15% 46 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.180639'
Avg. expression score for this sample: '74.6926'
Avg. expression score in LCM sample: '77.3551'
Tissue used: 'pure endosperm, no chalazal'
AT3G54650 FBL17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.70576 x 10-1 23 20 13 15 53.49% 53.57% 43 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.313766'
Avg. expression score for this sample: '88.5222'
Avg. expression score in LCM sample: '84.2191'
Tissue used: 'pure endosperm, no chalazal'
AT3G54650 FBL17 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.66486 x 10-1 374 127 74.65% 501 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54650 FBL17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.6175 x 10-2 29 20 13 97 59.18% 88.18% 49 110 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.313766'
Avg. expression score for this sample: '95.582'
Avg. expression score in LCM sample: '84.2191'
Tissue used: 'full endosperm'
AT3G54650 FBL17 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.93477 x 10-1 18 34 6 11 34.62% 64.71% 52 17 TAIR8 Avg. embryo expression (dissected): '164.531'
Avg. embryo expression (LCM): '166.665'
AT3G54650 FBL17 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 11 4 73.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54650 FBL17 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.15 x 10-4 299 59 83.52% 358 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54640 TSA1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54640 TSA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54640 TSA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '91.3813'
Avg. expression score in LCM sample: '29.7486'
Tissue used: 'full endosperm'
AT3G54640 TSA1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 7 2 77.78% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54640 TSA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '50.9112'
Avg. expression score in LCM sample: '29.7486'
Tissue used: 'pure endosperm, no chalazal'
AT3G54640 TSA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 0 0 66.67% 3 0 TAIR8 Avg. embryo expression (dissected): '130.91'
Avg. embryo expression (LCM): '166.627'
AT3G54630 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '139.069'
Avg. embryo expression (LCM): '172.341'
AT3G54630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '44.3034'
Avg. expression score in LCM sample: '54.0442'
Tissue used: 'full endosperm'
AT3G54630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '77.3675'
Avg. expression score in LCM sample: '54.0442'
Tissue used: 'pure endosperm, no chalazal'
AT3G54630 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54625 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54625 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54625 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G54625 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54625 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G54625 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G54620 BZIP25 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.9062 x 10-2 8 0 0 10 100.00% 100.00% 8 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.020604'
Avg. expression score for this sample: '138.89'
Avg. expression score in LCM sample: '89.4074'
Tissue used: 'full endosperm'
AT3G54620 BZIP25 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.75432 x 10-1 29 6 82.86% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54620 BZIP25 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 0 1 0 100.00% 0.00% 2 1 TAIR8 Avg. embryo expression (dissected): '108.575'
Avg. embryo expression (LCM): '75.5398'
AT3G54620 BZIP25 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54620 BZIP25 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.2381 x 10-1 25 5 83.33% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54620 BZIP25 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.35117 x 10-1 7 0 2 2 100.00% 50.00% 7 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.020604'
Avg. expression score for this sample: '133.171'
Avg. expression score in LCM sample: '89.4074'
Tissue used: 'pure endosperm, no chalazal'
AT3G54610 HAG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '75.3895'
Avg. expression score in LCM sample: '54.25'
Tissue used: 'pure endosperm, no chalazal'
AT3G54610 HAG1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '81.4447'
Avg. embryo expression (LCM): '73.2793'
AT3G54610 HAG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '70.9228'
Avg. expression score in LCM sample: '54.25'
Tissue used: 'full endosperm'
AT3G54610 HAG1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54610 HAG1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54610 HAG1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54600 DJ1F endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54600 DJ1F endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54600 DJ1F endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G54600 DJ1F endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54600 DJ1F embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.54812'
Avg. embryo expression (LCM): '0'
AT3G54600 DJ1F endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G54590 HRGP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.21096 x 10-1 40 7 6 8 85.11% 57.14% 47 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.61777'
Avg. expression score for this sample: '23.6131'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G54590 HRGP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54590 HRGP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '2.18403'
Avg. embryo expression (LCM): '0'
AT3G54590 HRGP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54590 HRGP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54590 HRGP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.55643 x 10-1 13 7 4 0 65.00% 0.00% 20 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.61777'
Avg. expression score for this sample: '7.72397'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G54580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 2 0 1 77.78% 100.00% 9 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009846'
Avg. expression score for this sample: '8.40737'
Avg. expression score in LCM sample: '.955364'
Tissue used: 'pure endosperm, no chalazal'
AT3G54580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 0 2 1 100.00% 33.33% 2 3 TAIR8 Avg. embryo expression (dissected): '1.81897'
Avg. embryo expression (LCM): '.401874'
AT3G54580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.1269 x 10-2 91 20 5 15 81.98% 75.00% 111 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009846'
Avg. expression score for this sample: '26.5882'
Avg. expression score in LCM sample: '.955364'
Tissue used: 'full endosperm'
AT3G54580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.9988 x 10-2 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.03559 x 10-1 19 1 95.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54570 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.0741 x 10-2 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54570 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 2 2 100.00% 50.00% 2 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.139244'
Avg. expression score for this sample: '11.3401'
Avg. expression score in LCM sample: '5.86447'
Tissue used: 'pure endosperm, no chalazal'
AT3G54570 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.06581 x 10-1 5 5 50.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54570 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.825825'
Avg. embryo expression (LCM): '0'
AT3G54570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.4415 x 10-2 2 6 6 3 25.00% 33.33% 8 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.139244'
Avg. expression score for this sample: '6.12337'
Avg. expression score in LCM sample: '5.86447'
Tissue used: 'full endosperm'
AT3G54560 HTA11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.34 x 10-4 614 246 71.40% 860 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54560 HTA11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.7602 x 10-1 312 294 81 87 51.49% 51.79% 606 168 TAIR8 Avg. embryo expression (dissected): '1147.86'
Avg. embryo expression (LCM): '854.938'
AT3G54560 HTA11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.83784 x 10-1 10 4 71.43% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54560 HTA11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.7665 x 10-2 246 188 56.68% 434 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54560 HTA11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.319 x 10-2 120 103 87 178 53.81% 67.17% 223 265 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.086662'
Avg. expression score for this sample: '518.683'
Avg. expression score in LCM sample: '479.931'
Tissue used: 'pure endosperm, no chalazal'
AT3G54560 HTA11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.98305 x 10-1 16 18 30 72 47.06% 70.59% 34 102 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.086662'
Avg. expression score for this sample: '202.993'
Avg. expression score in LCM sample: '479.931'
Tissue used: 'full endosperm'
AT3G54550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '22.112'
Avg. expression score in LCM sample: '229.655'
Tissue used: 'full endosperm'
AT3G54550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 1 50.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '41.6448'
Avg. expression score in LCM sample: '229.655'
Tissue used: 'pure endosperm, no chalazal'
AT3G54550 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5.46258'
Avg. embryo expression (LCM): '0'
AT3G54550 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 28 16 63.64% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54550 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 14 8 63.64% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54550 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54540 ABCF4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.40673 x 10-1 19 4 82.61% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54540 ABCF4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.938 x 10-2 285 77 78.73% 362 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54540 ABCF4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.87148 x 10-1 31 14 17 52 68.89% 75.36% 45 69 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.127439'
Avg. expression score for this sample: '368.468'
Avg. expression score in LCM sample: '285.963'
Tissue used: 'pure endosperm, no chalazal'
AT3G54540 ABCF4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.46702 x 10-1 62 40 31 119 60.78% 79.33% 102 150 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.127439'
Avg. expression score for this sample: '518.314'
Avg. expression score in LCM sample: '285.963'
Tissue used: 'full endosperm'
AT3G54540 ABCF4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.7517 x 10-2 373 97 79.36% 470 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54540 ABCF4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.75015 x 10-1 43 29 10 10 59.72% 50.00% 72 20 TAIR8 Avg. embryo expression (dissected): '419.339'
Avg. embryo expression (LCM): '311.704'
AT3G54530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G54530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G54530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G54520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G54520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.326585'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G54520 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.671874'
Avg. embryo expression (LCM): '0'
AT3G54520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54520 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'