Displaying data sets 70601 - 70700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G54820 PIP2;5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54820 PIP2;5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '51.4843'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G54810 BME3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.2639 x 10-1 26 22 10 27 54.17% 72.97% 48 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.0008'
Avg. expression score for this sample: '230.402'
Avg. expression score in LCM sample: '70.9762'
Tissue used: 'pure endosperm, no chalazal'
AT3G54810 BME3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.5 x 10-6 68 1 98.55% 69 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54810 BME3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.7 x 10-5 83 5 94.32% 88 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54810 BME3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.8 x 10-5 92 44 27 198 67.65% 88.00% 136 225 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.0008'
Avg. expression score for this sample: '607.557'
Avg. expression score in LCM sample: '70.9762'
Tissue used: 'full endosperm'
AT3G54810 BME3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 9 0 2 43.75% 100.00% 16 2 TAIR8 Avg. embryo expression (dissected): '115.522'
Avg. embryo expression (LCM): '46.5923'
AT3G54810 BME3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.86333 x 10-1 17 3 85.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54804 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54804 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54804 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54804 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G54804 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G54804 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G54802 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G54802 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G54802 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G54802 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54802 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54802 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54800 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54800 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 2 66.67% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.52706'
Avg. expression score in LCM sample: '1.10234'
Tissue used: 'pure endosperm, no chalazal'
AT3G54800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 0 0 0 100.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.06591'
Avg. expression score in LCM sample: '1.10234'
Tissue used: 'full endosperm'
AT3G54800 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.22469'
Avg. embryo expression (LCM): '0'
AT3G54800 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54790 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.65563 x 10-1 20 3 86.96% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54790 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.191 x 10-3 37 0 100.00% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54790 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.155 x 10-3 71 3 95.95% 74 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54790 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.3965 x 10-2 14 46 7 11 23.33% 61.11% 60 18 TAIR8 Avg. embryo expression (dissected): '50.0858'
Avg. embryo expression (LCM): '49.2924'
AT3G54790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 4 1 7 63.64% 87.50% 11 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.007238'
Avg. expression score for this sample: '8.36023'
Avg. expression score in LCM sample: '3.17475'
Tissue used: 'pure endosperm, no chalazal'
AT3G54790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.128 x 10-3 34 8 8 50 80.95% 86.21% 42 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.007238'
Avg. expression score for this sample: '28.8288'
Avg. expression score in LCM sample: '3.17475'
Tissue used: 'full endosperm'
AT3G54780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.72503'
Avg. expression score in LCM sample: '2.70442'
Tissue used: 'full endosperm'
AT3G54780 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '25.363'
Avg. embryo expression (LCM): '17.2932'
AT3G54780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.66483'
Avg. expression score in LCM sample: '2.70442'
Tissue used: 'pure endosperm, no chalazal'
AT3G54780 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54780 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54780 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54770 ARP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54770 ARP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54770 ARP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.93492'
Avg. expression score in LCM sample: '16.1971'
Tissue used: 'pure endosperm, no chalazal'
AT3G54770 ARP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.348753'
Avg. expression score in LCM sample: '16.1971'
Tissue used: 'full endosperm'
AT3G54770 ARP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '.581807'
Avg. embryo expression (LCM): '0'
AT3G54770 ARP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.18282 x 10-1 206 68 75.18% 274 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2347 461 83.58% 2808 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.5 x 10-21 1929 469 80.44% 2398 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.8132 x 10-2 500 632 140 173 44.17% 55.27% 1132 313 TAIR8 Avg. embryo expression (dissected): '3708.45'
Avg. embryo expression (LCM): '2209.1'
AT3G54760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.99353 x 10-1 497 338 191 476 59.52% 71.36% 835 667 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.0e-06'
Avg. expression score for this sample: '2441.68'
Avg. expression score in LCM sample: '574.806'
Tissue used: 'pure endosperm, no chalazal'
AT3G54760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.5 x 10-10 1207 443 897 2325 73.15% 72.16% 1650 3222 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.0e-06'
Avg. expression score for this sample: '3157.52'
Avg. expression score in LCM sample: '574.806'
Tissue used: 'full endosperm'
AT3G54750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.27131 x 10-1 3 1 3 24 75.00% 88.89% 4 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.325596'
Avg. expression score for this sample: '15.5731'
Avg. expression score in LCM sample: '16.6086'
Tissue used: 'full endosperm'
AT3G54750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 6 1 2 45.45% 66.67% 11 3 TAIR8 Avg. embryo expression (dissected): '80.6946'
Avg. embryo expression (LCM): '101.159'
AT3G54750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.09859 x 10-1 4 2 3 1 66.67% 25.00% 6 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.325596'
Avg. expression score for this sample: '27.3042'
Avg. expression score in LCM sample: '16.6086'
Tissue used: 'pure endosperm, no chalazal'
AT3G54750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.79822 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 17 4 80.95% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 138 11 92.62% 149 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT3G54740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3948 x 10-2 107 25 81.06% 132 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT3G54740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 2.73343 x 10-1 11 1 2 6 91.67% 75.00% 12 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000034'
Avg. expression score for this sample: '16.264'
Avg. expression score in LCM sample: '11.2586'
Tissue used: 'pure endosperm, no chalazal'
AT3G54740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 2.7 x 10-5 24 0 2 31 100.00% 93.94% 24 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000034'
Avg. expression score for this sample: '28.1825'
Avg. expression score in LCM sample: '11.2586'
Tissue used: 'full endosperm'
AT3G54740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 5 5 3 50.00% 37.50% 10 8 TAIR8 Avg. embryo expression (dissected): '33.4378'
Avg. embryo expression (LCM): '34.0212'
AT3G54740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 10 0 100.00% 10 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT3G54730 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54730 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G54730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.440954'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G54730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G54720 AMP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.15987 x 10-1 2 2 5 7 50.00% 58.33% 4 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.754622'
Avg. expression score for this sample: '18.0912'
Avg. expression score in LCM sample: '8.42191'
Tissue used: 'full endosperm'
AT3G54720 AMP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.91329 x 10-1 15 8 3 2 65.22% 40.00% 23 5 TAIR8 Avg. embryo expression (dissected): '130.869'
Avg. embryo expression (LCM): '143.419'
AT3G54720 AMP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 2 0 2 50.00% 100.00% 4 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.754622'
Avg. expression score for this sample: '22.0378'
Avg. expression score in LCM sample: '8.42191'
Tissue used: 'pure endosperm, no chalazal'
AT3G54720 AMP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54720 AMP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.784 x 10-2 0 6 0.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54720 AMP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.06087 x 10-1 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54710 CDT1B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.48472 x 10-1 98 38 72.06% 136 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54710 CDT1B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.2667 x 10-2 32 31 50.79% 63 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54710 CDT1B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.3755 x 10-2 14 1 1 9 93.33% 90.00% 15 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '10.2195'
Avg. expression score in LCM sample: '14.11'
Tissue used: 'pure endosperm, no chalazal'
AT3G54710 CDT1B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.5924 x 10-1 10 3 23 26 76.92% 53.06% 13 49 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '18.463'
Avg. expression score in LCM sample: '14.11'
Tissue used: 'full endosperm'
AT3G54710 CDT1B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 15 11 7 1 57.69% 12.50% 26 8 TAIR8 Avg. embryo expression (dissected): '30.626'
Avg. embryo expression (LCM): '39.9488'
AT3G54710 CDT1B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54700 PHT1;7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54700 PHT1;7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54700 PHT1;7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54700 PHT1;7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G54700 PHT1;7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.789322'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G54700 PHT1;7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.109987'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G54690 SETH3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '154.839'
Avg. expression score in LCM sample: '69.0067'
Tissue used: 'full endosperm'
AT3G54690 SETH3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '74.2807'
Avg. embryo expression (LCM): '44.0053'
AT3G54690 SETH3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '121.879'
Avg. expression score in LCM sample: '69.0067'
Tissue used: 'pure endosperm, no chalazal'
AT3G54690 SETH3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54690 SETH3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54690 SETH3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54680 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-12 228 4 98.28% 232 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54680 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.1 x 10-8 333 21 94.07% 354 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 42 18 17 27 70.00% 61.36% 60 44 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00003'
Avg. expression score for this sample: '31.6757'
Avg. expression score in LCM sample: '9.75942'
Tissue used: 'pure endosperm, no chalazal'
AT3G54680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.8 x 10-7 112 17 21 117 86.82% 84.78% 129 138 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00003'
Avg. expression score for this sample: '48.2273'
Avg. expression score in LCM sample: '9.75942'
Tissue used: 'full endosperm'
AT3G54680 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.74784 x 10-1 73 65 57 19 52.90% 25.00% 138 76 TAIR8 Avg. embryo expression (dissected): '99.3351'
Avg. embryo expression (LCM): '70.9308'
AT3G54680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.3392 x 10-2 25 1 96.15% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54670 TTN8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.6 x 10-6 134 18 88.16% 152 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G54670 TTN8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.2 x 10-10 714 157 81.97% 871 TAIR8 Mutant effect: 'N/A (not a MEG)'