Displaying data sets 69901 - 70000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G55820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.53435 x 10-1 1 3 4 1 25.00% 20.00% 4 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.153435'
Avg. expression score for this sample: '6.32622'
Avg. expression score in LCM sample: '5.36474'
Tissue used: 'full endosperm'
AT3G55820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.3 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.5454 x 10-2 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55820 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.153435'
Avg. expression score for this sample: '5.1806'
Avg. expression score in LCM sample: '5.36474'
Tissue used: 'pure endosperm, no chalazal'
AT3G55820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '2.53347'
Avg. embryo expression (LCM): '4.58388'
AT3G55810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.0937'
Avg. embryo expression (LCM): '0'
AT3G55810 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.244994'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G55810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G55810 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55810 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55800 SBPASE endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.62579 x 10-1 39 11 78.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55800 SBPASE endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.6186 x 10-1 26 13 66.67% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55800 SBPASE endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.3034 x 10-1 178 88 56 122 66.92% 68.54% 266 178 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.468691'
Avg. expression score for this sample: '755.928'
Avg. expression score in LCM sample: '231.139'
Tissue used: 'pure endosperm, no chalazal'
AT3G55800 SBPASE embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.63333 x 10-1 174 252 70 98 40.85% 58.33% 426 168 TAIR8 Avg. embryo expression (dissected): '1599.19'
Avg. embryo expression (LCM): '724.391'
AT3G55800 SBPASE endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.82202 x 10-1 216 119 90 241 64.48% 72.81% 335 331 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.468691'
Avg. expression score for this sample: '440.613'
Avg. expression score in LCM sample: '231.139'
Tissue used: 'full endosperm'
AT3G55800 SBPASE endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.424 x 10-3 57 9 86.36% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55795 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55795 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G55795 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G55795 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55795 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55795 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G55790 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G55790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G55790 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55790 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55790 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G55780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '1.00493'
Avg. expression score in LCM sample: '1.14644'
Tissue used: 'pure endosperm, no chalazal'
AT3G55780 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55780 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55780 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 3 0 0 40.00% 5 0 TAIR8 Avg. embryo expression (dissected): '3.76258'
Avg. embryo expression (LCM): '0'
AT3G55780 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.44444 x 10-1 5 0 0 0 100.00% 5 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '.972591'
Avg. expression score in LCM sample: '1.14644'
Tissue used: 'full endosperm'
AT3G55770 WLIM2b endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.12826 x 10-1 43 40 24 137 51.81% 85.09% 83 161 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.103811'
Avg. expression score for this sample: '787.205'
Avg. expression score in LCM sample: '468.408'
Tissue used: 'full endosperm'
AT3G55770 WLIM2b endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.41 x 10-4 50 3 94.34% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55770 WLIM2b endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.62 x 10-4 39 2 95.12% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55770 WLIM2b endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.554 x 10-3 33 2 94.29% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55770 WLIM2b endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.64299 x 10-1 12 19 5 43 38.71% 89.58% 31 48 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.103811'
Avg. expression score for this sample: '695.499'
Avg. expression score in LCM sample: '468.408'
Tissue used: 'pure endosperm, no chalazal'
AT3G55770 WLIM2b embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.99011 x 10-1 9 17 0 3 34.62% 100.00% 26 3 TAIR8 Avg. embryo expression (dissected): '370.5'
Avg. embryo expression (LCM): '426.05'
AT3G55760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.21257 x 10-1 11 8 4 10 57.89% 71.43% 19 14 TAIR8 Avg. embryo expression (dissected): '1194.87'
Avg. embryo expression (LCM): '427.406'
AT3G55760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.33 x 10-4 28 1 96.55% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 14 6 10 21 70.00% 67.74% 20 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.893302'
Avg. expression score for this sample: '495.433'
Avg. expression score in LCM sample: '250.467'
Tissue used: 'full endosperm'
AT3G55760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 24 12 12 28 66.67% 70.00% 36 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.893302'
Avg. expression score for this sample: '966.767'
Avg. expression score in LCM sample: '250.467'
Tissue used: 'pure endosperm, no chalazal'
AT3G55760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 3 66.67% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.89408 x 10-1 26 7 78.79% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-6 78 6 92.86% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.48333 x 10-1 6 8 42.86% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.80172 x 10-1 5 1 5 1 83.33% 16.67% 6 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.507731'
Avg. expression score for this sample: '403.858'
Avg. expression score in LCM sample: '198.686'
Tissue used: 'pure endosperm, no chalazal'
AT3G55750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.7733 x 10-2 20 1 3 0 95.24% 0.00% 21 3 TAIR8 Avg. embryo expression (dissected): '1226.52'
Avg. embryo expression (LCM): '1645.54'
AT3G55750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.17528 x 10-1 23 4 21 19 85.19% 47.50% 27 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.507731'
Avg. expression score for this sample: '320.347'
Avg. expression score in LCM sample: '198.686'
Tissue used: 'full endosperm'
AT3G55750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 49 32 60.49% 81 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55740 PROT2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.55759 x 10-1 41 11 78.85% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55740 PROT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.10486 x 10-1 14 6 11 49 70.00% 81.67% 20 60 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.352271'
Avg. expression score for this sample: '37.1652'
Avg. expression score in LCM sample: '21.5177'
Tissue used: 'full endosperm'
AT3G55740 PROT2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.6983 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55740 PROT2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.63488 x 10-1 45 12 78.95% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55740 PROT2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.05267 x 10-1 4 11 2 1 26.67% 33.33% 15 3 TAIR8 Avg. embryo expression (dissected): '30.7446'
Avg. embryo expression (LCM): '5.87741'
AT3G55740 PROT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.47527 x 10-1 4 6 3 7 40.00% 70.00% 10 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.352271'
Avg. expression score for this sample: '11.479'
Avg. expression score in LCM sample: '21.5177'
Tissue used: 'pure endosperm, no chalazal'
AT3G55735 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G55735 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G55735 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G55735 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55735 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55735 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55734 MIR393B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55734 MIR393B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55734 MIR393B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G55734 MIR393B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G55734 MIR393B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55734 MIR393B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G55730 MYB109 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.8235 x 10-2 146 22 77 145 86.90% 65.32% 168 222 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.097211'
Avg. expression score for this sample: '362.689'
Avg. expression score in LCM sample: '526.891'
Tissue used: 'full endosperm'
AT3G55730 MYB109 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.30838 x 10-1 215 71 75.17% 286 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55730 MYB109 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.2 x 10-18 293 23 92.72% 316 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55730 MYB109 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 35 15 70.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55730 MYB109 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.44991 x 10-1 190 45 111 128 80.85% 53.56% 235 239 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.097211'
Avg. expression score for this sample: '479.091'
Avg. expression score in LCM sample: '526.891'
Tissue used: 'pure endosperm, no chalazal'
AT3G55730 MYB109 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.39254 x 10-1 28 13 8 11 68.29% 57.89% 41 19 TAIR8 Avg. embryo expression (dissected): '89.7634'
Avg. embryo expression (LCM): '59.5277'
AT3G55720 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.23728'
Avg. embryo expression (LCM): '0'
AT3G55720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.342571'
Avg. expression score in LCM sample: '1.96952'
Tissue used: 'pure endosperm, no chalazal'
AT3G55720 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.72926'
Avg. expression score in LCM sample: '1.96952'
Tissue used: 'full endosperm'
AT3G55720 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55720 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.937 x 10-3 0 4 0.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '1.01222'
Avg. expression score in LCM sample: '.955364'
Tissue used: 'pure endosperm, no chalazal'
AT3G55710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.22208 x 10-1 13 8 6 6 61.90% 50.00% 21 12 TAIR8 Avg. embryo expression (dissected): '28.9096'
Avg. embryo expression (LCM): '4.93552'
AT3G55710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 4 0 0 0 100.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '3.67166'
Avg. expression score in LCM sample: '.955364'
Tissue used: 'full endosperm'
AT3G55710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55700 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.56806 x 10-1 4 3 57.14% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.85082 x 10-1 4 0 3 9 100.00% 75.00% 4 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.523097'
Avg. expression score for this sample: '6.87231'
Avg. expression score in LCM sample: '4.70333'
Tissue used: 'full endosperm'
AT3G55700 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55700 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.13089 x 10-1 22 4 84.62% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G55700 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.185865'
Avg. embryo expression (LCM): '0'
AT3G55700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 2 0 1 60.00% 100.00% 5 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.523097'
Avg. expression score for this sample: '3.97383'
Avg. expression score in LCM sample: '4.70333'
Tissue used: 'pure endosperm, no chalazal'
AT3G55690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.66151'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G55690 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Avg. embryo expression (dissected): '7.33636'
Avg. embryo expression (LCM): '28.307'
AT3G55690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 2 100.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '12.8132'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G55690 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.2 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'