| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Carubv10004904m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 1.829623 x 10-1 | 5 | 29 | 22 | 28 | 14.71% | 56.00% | 34 | 50 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10004904m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.34 | 19 | 27 | 10 | 31 | 41.30% | 75.61% | 46 | 41 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10004759m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 289 | 120 | 14 | 165 | 70.66% | 92.18% | 409 | 179 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10004759m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 9.383903 x 10-1 | 523 | 231 | 243 | 490 | 69.36% | 66.85% | 754 | 733 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10004715m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | not imprinted | 1.5605 x 10-3 | 8 | 0 | 0 | 24 | 100.00% | 100.00% | 8 | 24 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10004715m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | not imprinted | 0.0 | 35 | 0 | 0 | 57 | 100.00% | 100.00% | 35 | 57 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10004650m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 34 | 0 | 0 | 182 | 100.00% | 100.00% | 34 | 182 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10004650m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 5.26063 x 10-2 | 0 | 0 | 0 | 10 | 100.00% | 0 | 10 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
|||||
| Carubv10004635m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | MEG | 3.14847 x 10-2 | 16 | 0 | 0 | 12 | 100.00% | 100.00% | 16 | 12 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10004635m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 7.41 x 10-12 | 63 | 0 | 0 | 102 | 100.00% | 100.00% | 63 | 102 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10004615m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 1260 | 6 | 49 | 1023 | 99.53% | 95.43% | 1266 | 1072 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10004615m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 0.0 | 1599 | 29 | 16 | 686 | 98.22% | 97.72% | 1628 | 702 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10004580m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 9.07847 x 10-1 | 138 | 107 | 65 | 127 | 56.33% | 66.15% | 245 | 192 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10004580m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 77 | 47 | 57 | 13 | 62.10% | 18.57% | 124 | 70 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10004576m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 33 | 0 | 0 | 43 | 100.00% | 100.00% | 33 | 43 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10004576m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 3.110792 x 10-1 | 3 | 0 | 0 | 3 | 100.00% | 100.00% | 3 | 3 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10004549m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 100 | 67 | 50 | 18 | 59.88% | 26.47% | 167 | 68 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10004549m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 1.60261 x 10-2 | 104 | 55 | 74 | 213 | 65.41% | 74.22% | 159 | 287 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10004468m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 5.76 x 10-7 | 820 | 352 | 235 | 698 | 69.97% | 74.81% | 1172 | 933 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10004468m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 540 | 315 | 243 | 69 | 63.16% | 22.12% | 855 | 312 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10004445m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 3.390487 x 10-1 | 41 | 85 | 41 | 65 | 32.54% | 61.32% | 126 | 106 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10004445m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 88 | 247 | 52 | 212 | 26.27% | 80.30% | 335 | 264 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10004416m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 30 | 0 | 1 | 31 | 100.00% | 96.88% | 30 | 32 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10004416m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 7.0453 x 10-3 | 7 | 2 | 0 | 18 | 77.78% | 100.00% | 9 | 18 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10004261m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 34 | 3 | 7 | 56 | 91.89% | 88.89% | 37 | 63 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10004261m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 8.033649 x 10-1 | 37 | 7 | 25 | 54 | 84.09% | 68.35% | 44 | 79 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10004153m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 2.39 x 10-6 | 66 | 20 | 4 | 68 | 76.74% | 94.44% | 86 | 72 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10004153m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | not imprinted | 0.0 | 6 | 1 | 60 | 41 | 85.71% | 40.59% | 7 | 101 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10003962m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.08 | 55 | 4 | 4 | 24 | 93.22% | 85.71% | 59 | 28 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10003962m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 5.109 x 10-4 | 30 | 18 | 6 | 53 | 62.50% | 89.83% | 48 | 59 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10003876m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 7.247 x 10-4 | 120 | 196 | 159 | 446 | 37.97% | 73.72% | 316 | 605 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10003876m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 268 | 105 | 5 | 44 | 71.85% | 89.80% | 373 | 49 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10003825m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 6.0418 x 10-3 | 35 | 2 | 1 | 24 | 94.59% | 96.00% | 37 | 25 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10003825m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 0.0 | 126 | 6 | 15 | 389 | 95.45% | 96.29% | 132 | 404 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10003823m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 1.9 x 10-22 | 357 | 8 | 8 | 238 | 97.81% | 96.75% | 365 | 246 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10003823m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 0.0 | 541 | 16 | 24 | 941 | 97.13% | 97.51% | 557 | 965 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10003785m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | PEG | PEG | 5.97 x 10-16 | 2 | 144 | 35 | 0 | 1.37% | 0.00% | 146 | 35 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10003785m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 0.0 | 0 | 131 | 269 | 63 | 0.00% | 18.98% | 131 | 332 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10003775m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | pat bias | PEG | 3.82 x 10-6 | 35 | 29 | 20 | 5 | 54.69% | 20.00% | 64 | 25 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10003775m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 1.32 x 10-9 | 7 | 36 | 41 | 15 | 16.28% | 26.79% | 43 | 56 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10003625m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 3.04 x 10-5 | 101 | 27 | 30 | 143 | 78.91% | 82.66% | 128 | 173 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10003625m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | not imprinted | 0.0 | 203 | 15 | 20 | 164 | 93.12% | 89.13% | 218 | 184 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10003589m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.23 | 3 | 28 | 5 | 21 | 9.68% | 80.77% | 31 | 26 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Accession bias' |
||||
| Carubv10003589m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 4.275039 x 10-1 | 10 | 21 | 14 | 20 | 32.26% | 58.82% | 31 | 34 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Accession bias' |
||||
| Carubv10003477m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | no data | 1.44 x 10-23 | 3 | 19 | 58 | 3 | 13.64% | 4.92% | 22 | 61 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10003477m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | no data | 0.07 | 0 | 0 | 9 | 6 | 40.00% | 0 | 15 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
|||||
| Carubv10003318m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | no data | 0.14 | 9 | 6 | 1 | 11 | 60.00% | 91.67% | 15 | 12 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10003318m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | no data | 2.684641 x 10-1 | 7 | 23 | 20 | 27 | 23.33% | 57.45% | 30 | 47 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10003281m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 4.2434 x 10-3 | 21 | 3 | 0 | 20 | 87.50% | 100.00% | 24 | 20 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10003281m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.2 | 43 | 10 | 17 | 53 | 81.13% | 75.71% | 53 | 70 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10003152m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | pat bias | PEG | 2.81 x 10-7 | 8 | 170 | 65 | 48 | 4.49% | 42.48% | 178 | 113 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10003152m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 0.0 | 22 | 630 | 346 | 127 | 3.37% | 26.85% | 652 | 473 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10003078m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 2.229 x 10-3 | 30 | 4 | 18 | 84 | 88.24% | 82.35% | 34 | 102 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Accession bias' |
||||
| Carubv10003078m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.01 | 23 | 6 | 1 | 22 | 79.31% | 95.65% | 29 | 23 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Accession bias' |
||||
| Carubv10002883m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | MEG | 7.0453 x 10-3 | 26 | 0 | 0 | 18 | 100.00% | 100.00% | 26 | 18 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10002883m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 330 | 2 | 0 | 548 | 99.40% | 100.00% | 332 | 548 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10002816m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 57 | 2 | 18 | 366 | 96.61% | 95.31% | 59 | 384 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10002816m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 2.0 x 10-30 | 330 | 10 | 13 | 334 | 97.06% | 96.25% | 340 | 347 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10002769m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 3.14847 x 10-2 | 2 | 0 | 0 | 12 | 100.00% | 100.00% | 2 | 12 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10002769m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 48 | 0 | 2 | 182 | 100.00% | 98.91% | 48 | 184 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10002716m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 1.114402 x 10-1 | 64 | 19 | 38 | 51 | 77.11% | 57.30% | 83 | 89 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10002716m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.25 | 35 | 1 | 12 | 39 | 97.22% | 76.47% | 36 | 51 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10002627m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 7.185408 x 10-1 | 67 | 7 | 19 | 43 | 90.54% | 69.35% | 74 | 62 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10002627m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 176 | 9 | 64 | 32 | 95.14% | 33.33% | 185 | 96 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10002608m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | no data | 6.77115 x 10-2 | 3 | 45 | 18 | 18 | 6.25% | 50.00% | 48 | 36 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10002608m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | no data | 0.43 | 1 | 2 | 0 | 2 | 33.33% | 100.00% | 3 | 2 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10002419m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 372 | 43 | 30 | 448 | 89.64% | 93.72% | 415 | 478 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10002419m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 0.0 | 543 | 42 | 62 | 628 | 92.82% | 91.01% | 585 | 690 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10002095m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 2.375423 x 10-1 | 0 | 0 | 0 | 4 | 100.00% | 0 | 4 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
|||||
| Carubv10002095m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 178 | 0 | 0 | 199 | 100.00% | 100.00% | 178 | 199 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10002071m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | mat bias | MEG | 1.91 x 10-7 | 164 | 35 | 34 | 182 | 82.41% | 84.26% | 199 | 216 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10002071m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 445 | 14 | 16 | 459 | 96.95% | 96.63% | 459 | 475 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10002044m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 44 | 24 | 34 | 1 | 64.71% | 2.86% | 68 | 35 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10002044m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 6.482789 x 10-1 | 88 | 33 | 45 | 81 | 72.73% | 64.29% | 121 | 126 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10002033m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 3.5 x 10-15 | 438 | 194 | 22 | 224 | 69.30% | 91.06% | 632 | 246 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10002033m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 1737 | 1013 | 2142 | 5919 | 63.16% | 73.43% | 2750 | 8061 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10001875m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 1372 | 67 | 93 | 1402 | 95.34% | 93.78% | 1439 | 1495 | C. rubella v.1.0 |
Sanger Validation?: 'Imprinted in one direction of cross' Overall status: 'High stringency MEG' |
||||
| Carubv10001875m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 0.0 | 1101 | 47 | 9 | 379 | 95.91% | 97.68% | 1148 | 388 | C. rubella v.1.0 |
Sanger Validation?: 'Imprinted in one direction of cross' Overall status: 'High stringency MEG' |
||||
| Carubv10001860m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | not imprinted | 0.0 | 72 | 3 | 0 | 42 | 96.00% | 100.00% | 75 | 42 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10001860m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | not imprinted | 6.95948 x 10-2 | 17 | 7 | 2 | 17 | 70.83% | 89.47% | 24 | 19 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10001778m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 6.57557 x 10-2 | 61 | 39 | 16 | 58 | 61.00% | 78.38% | 100 | 74 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10001778m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.77 | 5 | 16 | 18 | 32 | 23.81% | 64.00% | 21 | 50 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10001751m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | not imprinted | 0.0 | 168 | 616 | 328 | 122 | 21.43% | 27.11% | 784 | 450 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10001751m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 265 | 427 | 305 | 305 | 38.29% | 50.00% | 692 | 610 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10001724m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.78 | 13 | 43 | 44 | 82 | 23.21% | 65.08% | 56 | 126 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10001724m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 7.307631 x 10-1 | 112 | 49 | 94 | 178 | 69.57% | 65.44% | 161 | 272 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10001714m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 1.22 x 10-18 | 161 | 0 | 0 | 165 | 100.00% | 100.00% | 161 | 165 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10001714m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 0.0 | 182 | 0 | 0 | 526 | 100.00% | 100.00% | 182 | 526 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10001337m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 3.26 x 10-7 | 52 | 0 | 0 | 58 | 100.00% | 100.00% | 52 | 58 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10001337m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 4.2 x 10-29 | 71 | 1 | 0 | 262 | 98.61% | 100.00% | 72 | 262 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10001251m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | PEG | PEG | 9.0 x 10-30 | 50 | 247 | 137 | 50 | 16.84% | 26.74% | 297 | 187 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10001251m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 0.0 | 89 | 331 | 737 | 186 | 21.19% | 20.15% | 420 | 923 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10001134m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | mat bias | MEG | 0.0 | 2742 | 316 | 406 | 2387 | 89.67% | 85.46% | 3058 | 2793 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10001134m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 0.0 | 2047 | 203 | 100 | 880 | 90.98% | 89.80% | 2250 | 980 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10001110m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 448 | 199 | 29 | 716 | 69.24% | 96.11% | 647 | 745 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10001110m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 2.47 x 10-27 | 1090 | 555 | 450 | 1609 | 66.26% | 78.14% | 1645 | 2059 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10001090m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 2.5198 x 10-3 | 22 | 9 | 2 | 31 | 70.97% | 93.94% | 31 | 33 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10001090m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.81 | 20 | 1 | 15 | 27 | 95.24% | 64.29% | 21 | 42 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10001038m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 7.35 x 10-28 | 181 | 1 | 0 | 249 | 99.45% | 100.00% | 182 | 249 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'High stringency MEG' |
||||
| Carubv10001038m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 1326 | 1 | 2 | 2100 | 99.92% | 99.90% | 1327 | 2102 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'High stringency MEG' |