| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM5G874277 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 941 | 187 | 692 | 164 | 83.42% | 19.16% | 1128 | 856 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G874277 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 352 | 10 | 213 | 57 | 97.24% | 21.11% | 362 | 270 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.61e-35' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G874201 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 5 | 0 | 0.00% | 0.00% | 2 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: '' |
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| GRMZM5G874201 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G874167 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.03 x 10-13 | 967 | 545 | 797 | 535 | 63.96% | 40.17% | 1512 | 1332 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.94e-27' χ2 p-value for Mo17 x B73: '7.03e-13' Biased in favor of strain: 'B73' |
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| GRMZM5G874167 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 640 | 77 | 400 | 183 | 89.26% | 31.39% | 717 | 583 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.06e-37' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G874163 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.891 x 10-4 | 345 | 215 | 261 | 186 | 61.61% | 41.61% | 560 | 447 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.94e-08' χ2 p-value for Mo17 x B73: '.0003891' Biased in favor of strain: 'B73' |
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| GRMZM5G874163 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.20676 x 10-1 | 10 | 2 | 11 | 11 | 83.33% | 50.00% | 12 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.220676' χ2 p-value for Mo17 x B73: '.0972544' Biased in favor of strain: '' |
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| GRMZM5G874112 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.18101 x 10-2 | 17 | 6 | 10 | 0 | 73.91% | 0.00% | 23 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0218101' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: 'B73' |
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| GRMZM5G874112 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.92315 x 10-2 | 15 | 2 | 18 | 10 | 88.24% | 35.71% | 17 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0592315' χ2 p-value for Mo17 x B73: '.000512' Biased in favor of strain: '' |
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| GRMZM5G874082 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 5 | 4 | 3 | 44.44% | 42.86% | 9 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: '' |
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| GRMZM5G874082 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 5 | 10 | 5 | 37.50% | 33.33% | 8 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.080115' χ2 p-value for Mo17 x B73: '.0061699' Biased in favor of strain: '' |
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| GRMZM5G873964 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.38578 x 10-1 | 7 | 15 | 9 | 6 | 31.82% | 40.00% | 22 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0880815' χ2 p-value for Mo17 x B73: '.438578' Biased in favor of strain: '' |
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| GRMZM5G873964 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
|||||||
| GRMZM5G873917 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.91 x 10-16 | 118 | 21 | 110 | 17 | 84.89% | 13.39% | 139 | 127 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.91e-16' χ2 p-value for Mo17 x B73: '1.55e-16' Biased in favor of strain: 'B73' |
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| GRMZM5G873917 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM5G873767 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.615133 x 10-1 | 34 | 0 | 16 | 9 | 100.00% | 36.00% | 34 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.51e-09' χ2 p-value for Mo17 x B73: '.1615133' Biased in favor of strain: '' |
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| GRMZM5G873767 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 16 | 0 | 4 | 5 | 100.00% | 55.56% | 16 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046779' χ2 p-value for Mo17 x B73: '.4795' Biased in favor of strain: '' |
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| GRMZM5G873681 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.967 x 10-4 | 97 | 17 | 34 | 10 | 85.09% | 22.73% | 114 | 44 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.75e-14' χ2 p-value for Mo17 x B73: '.0002967' Biased in favor of strain: 'B73' |
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| GRMZM5G873681 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 736 | 23 | 466 | 82 | 96.97% | 14.96% | 759 | 548 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G873675 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.32 x 10-8 | 56 | 0 | 30 | 0 | 100.00% | 0.00% | 56 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.25e-14' χ2 p-value for Mo17 x B73: '4.32e-08' Biased in favor of strain: 'B73' |
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| GRMZM5G873675 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.07 x 10-4 | 25 | 0 | 12 | 4 | 100.00% | 25.00% | 25 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000407' χ2 p-value for Mo17 x B73: '.000407' Biased in favor of strain: 'B73' |
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| GRMZM5G873635 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.18 x 10-12 | 145 | 20 | 86 | 16 | 87.88% | 15.69% | 165 | 102 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.22e-22' χ2 p-value for Mo17 x B73: '4.18e-12' Biased in favor of strain: 'B73' |
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| GRMZM5G873635 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.55002 x 10-2 | 28 | 0 | 12 | 9 | 100.00% | 42.86% | 28 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001828' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM5G873594 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.28 x 10-12 | 132 | 272 | 110 | 293 | 32.67% | 72.70% | 404 | 403 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.28e-12' χ2 p-value for Mo17 x B73: '7.80e-20' Biased in favor of strain: 'Mo17' |
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| GRMZM5G873594 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.149751 x 10-1 | 193 | 118 | 94 | 228 | 62.06% | 70.81% | 311 | 322 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0846659' χ2 p-value for Mo17 x B73: '.1149751' Biased in favor of strain: '' |
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| GRMZM5G873586 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 313 | 25 | 254 | 39 | 92.60% | 13.31% | 338 | 293 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.48e-36' Biased in favor of strain: 'B73' |
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| GRMZM5G873586 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 403 | 5 | 167 | 4 | 98.77% | 2.34% | 408 | 171 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G873519 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 5 | 1 | 6 | 44.44% | 85.71% | 9 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: '' |
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| GRMZM5G873519 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.54035 x 10-2 | 22 | 4 | 15 | 16 | 84.62% | 51.61% | 26 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0522058' χ2 p-value for Mo17 x B73: '.0754035' Biased in favor of strain: '' |
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| GRMZM5G873455 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.56 x 10-28 | 5808 | 4655 | 6291 | 5108 | 55.51% | 44.81% | 10463 | 11399 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.80e-29' χ2 p-value for Mo17 x B73: '1.56e-28' Biased in favor of strain: 'B73' |
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| GRMZM5G873455 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.08 x 10-20 | 2162 | 729 | 1537 | 1862 | 74.78% | 54.78% | 2891 | 3399 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.08e-20' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G873389 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM5G873389 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 8 | 0.00% | 100.00% | 1 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM5G873295 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.0 x 10-5 | 173 | 107 | 148 | 80 | 61.79% | 35.09% | 280 | 228 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.00008' χ2 p-value for Mo17 x B73: '6.69e-06' Biased in favor of strain: 'B73' |
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| GRMZM5G873295 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.051768 x 10-1 | 432 | 166 | 196 | 339 | 72.24% | 63.36% | 598 | 535 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0038345' χ2 p-value for Mo17 x B73: '.1051768' Biased in favor of strain: '' |
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| GRMZM5G873286 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 32 | 18 | 18 | 18 | 64.00% | 50.00% | 50 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0477149' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM5G873286 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.427963 x 10-1 | 33 | 12 | 22 | 32 | 73.33% | 59.26% | 45 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3427963' χ2 p-value for Mo17 x B73: '.2482129' Biased in favor of strain: '' |
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| GRMZM5G873277 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.8784 x 10-2 | 68 | 96 | 62 | 107 | 41.46% | 63.31% | 164 | 169 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.028784' χ2 p-value for Mo17 x B73: '.0005371' Biased in favor of strain: 'Mo17' |
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| GRMZM5G873277 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.758383 x 10-1 | 167 | 57 | 72 | 150 | 74.55% | 67.57% | 224 | 222 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0122815' χ2 p-value for Mo17 x B73: '.7758383' Biased in favor of strain: '' |
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| GRMZM5G873123 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.929801 x 10-1 | 30 | 26 | 15 | 10 | 53.57% | 40.00% | 56 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5929801' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G873123 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.166712 x 10-1 | 40 | 12 | 18 | 9 | 76.92% | 33.33% | 52 | 27 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1166712' χ2 p-value for Mo17 x B73: '.0002386' Biased in favor of strain: '' |
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| GRMZM5G873015 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 2 | 1 | 100.00% | 33.33% | 2 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM5G873015 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 1 | 0 | 83.33% | 0.00% | 6 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM5G872934 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.389825 x 10-1 | 23 | 14 | 13 | 32 | 62.16% | 71.11% | 37 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1389825' χ2 p-value for Mo17 x B73: '.0046207' Biased in favor of strain: '' |
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| GRMZM5G872934 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.197947 x 10-1 | 132 | 65 | 73 | 83 | 67.01% | 53.21% | 197 | 156 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9197947' χ2 p-value for Mo17 x B73: '.0003615' Biased in favor of strain: '' |
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| GRMZM5G872578 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.7451 x 10-3 | 29 | 5 | 17 | 3 | 85.29% | 15.00% | 34 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000386' χ2 p-value for Mo17 x B73: '.0017451' Biased in favor of strain: 'B73' |
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| GRMZM5G872578 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 10 | 100.00% | 0 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G872568 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.6777 x 10-3 | 15 | 2 | 15 | 3 | 88.24% | 16.67% | 17 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0016162' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: 'B73' |
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| GRMZM5G872568 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 2 | 3 | 6 | 71.43% | 66.67% | 7 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.789277' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM5G872499 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.031769 x 10-1 | 187 | 43 | 52 | 70 | 81.30% | 57.38% | 230 | 122 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.20e-21' χ2 p-value for Mo17 x B73: '.1031769' Biased in favor of strain: '' |
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| GRMZM5G872499 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.59 x 10-11 | 1735 | 595 | 727 | 1052 | 74.46% | 59.13% | 2330 | 1779 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.42e-15' χ2 p-value for Mo17 x B73: '1.59e-11' Biased in favor of strain: 'B73' |
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| GRMZM5G872442 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.38 x 10-21 | 328 | 127 | 342 | 126 | 72.09% | 26.92% | 455 | 468 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.38e-21' χ2 p-value for Mo17 x B73: '1.78e-23' Biased in favor of strain: 'B73' |
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| GRMZM5G872442 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.774535 x 10-1 | 189 | 65 | 113 | 208 | 74.41% | 64.80% | 254 | 321 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0088541' χ2 p-value for Mo17 x B73: '.4774535' Biased in favor of strain: '' |
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| GRMZM5G872417 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.496918 x 10-1 | 27 | 16 | 12 | 16 | 62.79% | 57.14% | 43 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0934478' χ2 p-value for Mo17 x B73: '.4496918' Biased in favor of strain: '' |
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| GRMZM5G872417 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.00263 x 10-2 | 25 | 22 | 16 | 16 | 53.19% | 50.00% | 47 | 32 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0500263' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM5G872392 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 3856 | 1199 | 3153 | 807 | 76.28% | 20.38% | 5055 | 3960 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G872392 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.1912 x 10-3 | 96 | 23 | 31 | 23 | 80.67% | 42.59% | 119 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0011912' χ2 p-value for Mo17 x B73: '.0001749' Biased in favor of strain: 'B73' |
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| GRMZM5G872373 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.14 x 10-5 | 184 | 273 | 138 | 305 | 40.26% | 68.85% | 457 | 443 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000314' χ2 p-value for Mo17 x B73: '2.11e-15' Biased in favor of strain: 'Mo17' |
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| GRMZM5G872373 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.60925 x 10-2 | 85 | 65 | 66 | 168 | 56.67% | 71.79% | 150 | 234 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0093729' χ2 p-value for Mo17 x B73: '.0960925' Biased in favor of strain: '' |
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| GRMZM5G872264 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 7 | 7 | 3 | 8 | 50.00% | 72.73% | 14 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.131668' Biased in favor of strain: '' |
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| GRMZM5G872264 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 2 | 3 | 2 | 81.82% | 40.00% | 11 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2864275' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: '' |
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| GRMZM5G872256 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5771 x 10-3 | 50 | 23 | 101 | 39 | 68.49% | 27.86% | 73 | 140 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015771' χ2 p-value for Mo17 x B73: '1.61e-07' Biased in favor of strain: 'B73' |
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| GRMZM5G872256 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 0 | 18 | 7 | 100.00% | 28.00% | 9 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0338955' χ2 p-value for Mo17 x B73: '.0000411' Biased in favor of strain: '' |
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| GRMZM5G872217 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.04 x 10-5 | 78 | 14 | 49 | 14 | 84.78% | 22.22% | 92 | 63 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.52e-11' χ2 p-value for Mo17 x B73: '.0000104' Biased in favor of strain: 'B73' |
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| GRMZM5G872217 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.917 x 10-4 | 66 | 11 | 59 | 31 | 85.71% | 34.44% | 77 | 90 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003917' χ2 p-value for Mo17 x B73: '8.90e-11' Biased in favor of strain: 'B73' |
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| GRMZM5G872216 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.991428 x 10-1 | 98 | 62 | 71 | 68 | 61.25% | 48.92% | 160 | 139 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0044265' χ2 p-value for Mo17 x B73: '.7991428' Biased in favor of strain: '' |
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| GRMZM5G872216 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.286421 x 10-1 | 71 | 31 | 61 | 68 | 69.61% | 52.71% | 102 | 129 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5286421' χ2 p-value for Mo17 x B73: '.0007741' Biased in favor of strain: '' |
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| GRMZM5G872204 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.6162 x 10-3 | 245 | 180 | 245 | 151 | 57.65% | 38.13% | 425 | 396 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0016162' χ2 p-value for Mo17 x B73: '2.32e-06' Biased in favor of strain: 'B73' |
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| GRMZM5G872204 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.437 x 10-4 | 7 | 18 | 8 | 54 | 28.00% | 87.10% | 25 | 62 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000411' χ2 p-value for Mo17 x B73: '.0006437' Biased in favor of strain: 'Mo17' |
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| GRMZM5G872172 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 0 | 2 | 0.00% | 100.00% | 3 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM5G872172 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G872167 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 0 | 11 | 0 | 100.00% | 0.00% | 9 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026998' χ2 p-value for Mo17 x B73: '.0009111' Biased in favor of strain: '' |
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| GRMZM5G872167 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 0 | 11 | 0 | 100.00% | 0.00% | 9 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0338955' χ2 p-value for Mo17 x B73: '2.73e-06' Biased in favor of strain: '' |
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| GRMZM5G872147 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.8001 x 10-3 | 474 | 348 | 422 | 342 | 57.66% | 44.76% | 822 | 764 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000111' χ2 p-value for Mo17 x B73: '.0038001' Biased in favor of strain: 'B73' |
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| GRMZM5G872147 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.39 x 10-13 | 588 | 153 | 388 | 417 | 79.35% | 51.80% | 741 | 805 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.39e-13' χ2 p-value for Mo17 x B73: '3.65e-19' Biased in favor of strain: 'B73' |
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| GRMZM5G872118 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.944464 x 10-1 | 260 | 220 | 230 | 203 | 54.17% | 46.88% | 480 | 433 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0678892' χ2 p-value for Mo17 x B73: '.1944464' Biased in favor of strain: '' |
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| GRMZM5G872118 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.559746 x 10-1 | 51 | 20 | 52 | 52 | 71.83% | 50.00% | 71 | 104 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3559746' χ2 p-value for Mo17 x B73: '.0003115' Biased in favor of strain: '' |
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| GRMZM5G872070 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2485 | 636 | 1966 | 576 | 79.62% | 22.66% | 3121 | 2542 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G872070 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 809 | 85 | 482 | 196 | 90.49% | 28.91% | 894 | 678 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G872068 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.29 x 10-19 | 425 | 136 | 347 | 147 | 75.76% | 29.76% | 561 | 494 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.05e-34' χ2 p-value for Mo17 x B73: '2.29e-19' Biased in favor of strain: 'B73' |
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| GRMZM5G872068 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.020281 x 10-1 | 79 | 0 | 10 | 13 | 100.00% | 56.52% | 79 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.28e-10' χ2 p-value for Mo17 x B73: '.3020281' Biased in favor of strain: '' |
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| GRMZM5G871936 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 11 | 4 | 3 | 2 | 73.33% | 40.00% | 15 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0707011' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: '' |
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| GRMZM5G871936 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 7 | 5 | 50.00% | 41.67% | 4 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4794928' χ2 p-value for Mo17 x B73: '.0661925' Biased in favor of strain: '' |
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| GRMZM5G871910 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.13 x 10-7 | 317 | 155 | 291 | 184 | 67.16% | 38.74% | 472 | 475 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.87e-14' χ2 p-value for Mo17 x B73: '9.13e-07' Biased in favor of strain: 'B73' |
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| GRMZM5G871910 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.682531 x 10-1 | 255 | 55 | 73 | 119 | 82.26% | 61.98% | 310 | 192 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.77e-09' χ2 p-value for Mo17 x B73: '.1682531' Biased in favor of strain: '' |
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| GRMZM5G871861 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 698 | 318 | 683 | 274 | 68.70% | 28.63% | 1016 | 957 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.13e-33' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G871861 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.78 x 10-7 | 354 | 98 | 234 | 303 | 78.32% | 56.42% | 452 | 537 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.48e-07' χ2 p-value for Mo17 x B73: '4.78e-07' Biased in favor of strain: 'B73' |
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| GRMZM5G871827 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.22 x 10-9 | 47 | 0 | 33 | 0 | 100.00% | 0.00% | 47 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.10e-12' χ2 p-value for Mo17 x B73: '9.22e-09' Biased in favor of strain: 'B73' |
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| GRMZM5G871827 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 9 | 0 | 100.00% | 0.00% | 1 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: '' |
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| GRMZM5G871520 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.67 x 10-7 | 64 | 9 | 53 | 12 | 87.67% | 18.46% | 73 | 65 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.22e-10' χ2 p-value for Mo17 x B73: '3.67e-07' Biased in favor of strain: 'B73' |
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| GRMZM5G871520 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 5 | 3 | 0 | 0.00% | 0.00% | 5 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015653' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM5G871471 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 246 | 1 | 0 | 0 | 99.60% | 247 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G871471 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2651 | 1 | 0 | 0 | 99.96% | 2652 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G871457 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 2 | 1 | 2 | 60.00% | 66.67% | 5 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM5G871457 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 2 | 3 | 4 | 33.33% | 57.14% | 3 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206667' χ2 p-value for Mo17 x B73: '.59298' Biased in favor of strain: '' |
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| GRMZM5G871419 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.87817 x 10-2 | 27 | 13 | 9 | 19 | 67.50% | 67.86% | 40 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0268567' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: '' |
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| GRMZM5G871419 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.596839 x 10-1 | 6 | 8 | 5 | 11 | 42.86% | 68.75% | 14 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0587785' χ2 p-value for Mo17 x B73: '.8596839' Biased in favor of strain: '' |
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| GRMZM5G871418 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.845773 x 10-1 | 187 | 118 | 140 | 131 | 61.31% | 48.34% | 305 | 271 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000778' χ2 p-value for Mo17 x B73: '.5845773' Biased in favor of strain: '' |
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| GRMZM5G871418 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.083443 x 10-1 | 439 | 191 | 258 | 372 | 69.68% | 59.05% | 630 | 630 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1083443' χ2 p-value for Mo17 x B73: '.0000498' Biased in favor of strain: '' |