Displaying data sets 69501 - 69600 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G56480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 1 3 66.67% 75.00% 3 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.073405'
Avg. expression score for this sample: '8.17264'
Avg. expression score in LCM sample: '5.46762'
Tissue used: 'pure endosperm, no chalazal'
AT3G56480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.05707 x 10-1 15 11 4 3 57.69% 42.86% 26 7 TAIR8 Avg. embryo expression (dissected): '35.6777'
Avg. embryo expression (LCM): '22.7687'
AT3G56480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.553 x 10-3 54 1 98.18% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.5741 x 10-2 20 1 6 19 95.24% 76.00% 21 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.073405'
Avg. expression score for this sample: '20.9072'
Avg. expression score in LCM sample: '5.46762'
Tissue used: 'full endosperm'
AT3G56470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.6048 x 10-2 19 0 5 9 100.00% 64.29% 19 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.471261'
Avg. expression score for this sample: '34.1358'
Avg. expression score in LCM sample: '5.33534'
Tissue used: 'full endosperm'
AT3G56470 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56470 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.18185 x 10-1 26 3 89.66% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56470 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.2789 x 10-2 29 2 93.55% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56470 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 2 1 1 60.00% 50.00% 5 2 TAIR8 Avg. embryo expression (dissected): '15.3681'
Avg. embryo expression (LCM): '1.14283'
AT3G56470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.09859 x 10-1 3 2 3 2 60.00% 40.00% 5 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.471261'
Avg. expression score for this sample: '19.982'
Avg. expression score in LCM sample: '5.33534'
Tissue used: 'pure endosperm, no chalazal'
AT3G56460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.23273 x 10-1 25 7 7 26 78.12% 78.79% 32 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000581'
Avg. expression score for this sample: '263.844'
Avg. expression score in LCM sample: '148.567'
Tissue used: 'pure endosperm, no chalazal'
AT3G56460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.16301 x 10-1 14 15 2 6 48.28% 75.00% 29 8 TAIR8 Avg. embryo expression (dissected): '301.617'
Avg. embryo expression (LCM): '136.838'
AT3G56460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-6 172 8 95.56% 180 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.581 x 10-3 88 10 29 75 89.80% 72.12% 98 104 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000581'
Avg. expression score for this sample: '478.27'
Avg. expression score in LCM sample: '148.567'
Tissue used: 'full endosperm'
AT3G56460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.08595 x 10-1 175 28 86.21% 203 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.44133 x 10-1 19 7 73.08% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56450 ALPHA-SNAP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.1916 4 4 50.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56450 ALPHA-SNAP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.71212 x 10-1 18 4 81.82% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56450 ALPHA-SNAP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.13535 x 10-1 59 8 88.06% 67 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56450 ALPHA-SNAP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 4 3 1 50.00% 25.00% 8 4 TAIR8 Avg. embryo expression (dissected): '15.0779'
Avg. embryo expression (LCM): '13.2242'
AT3G56450 ALPHA-SNAP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.80115 x 10-1 10 2 2 6 83.33% 75.00% 12 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.244771'
Avg. expression score for this sample: '9.51502'
Avg. expression score in LCM sample: '6.45238'
Tissue used: 'pure endosperm, no chalazal'
AT3G56450 ALPHA-SNAP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.87747 x 10-1 19 4 7 16 82.61% 69.57% 23 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.244771'
Avg. expression score for this sample: '17.8427'
Avg. expression score in LCM sample: '6.45238'
Tissue used: 'full endosperm'
AT3G56440 ATG18D endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.72402'
Avg. expression score in LCM sample: '3.5569'
Tissue used: 'full endosperm'
AT3G56440 ATG18D endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56440 ATG18D endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56440 ATG18D endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.22307'
Avg. expression score in LCM sample: '3.5569'
Tissue used: 'pure endosperm, no chalazal'
AT3G56440 ATG18D embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.46285'
Avg. embryo expression (LCM): '5.32484'
AT3G56440 ATG18D endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.84 x 10-4 184 36 83.64% 220 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56430 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.38028 x 10-1 81 108 11 26 42.86% 70.27% 189 37 TAIR8 Avg. embryo expression (dissected): '167.961'
Avg. embryo expression (LCM): '231.831'
AT3G56430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 73 59 29 100 55.30% 77.52% 132 129 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.093683'
Avg. expression score for this sample: '101.838'
Avg. expression score in LCM sample: '55.0731'
Tissue used: 'pure endosperm, no chalazal'
AT3G56430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.8926 x 10-2 119 53 33 141 69.19% 81.03% 172 174 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.093683'
Avg. expression score for this sample: '189.19'
Avg. expression score in LCM sample: '55.0731'
Tissue used: 'full endosperm'
AT3G56430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.23137 x 10-1 47 26 64.38% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.59795 x 10-1 238 76 75.80% 314 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G56420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G56420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G56410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '82.1032'
Avg. expression score in LCM sample: '92.3176'
Tissue used: 'full endosperm'
AT3G56410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Avg. embryo expression (dissected): '170.11'
Avg. embryo expression (LCM): '87.1816'
AT3G56410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '71.3873'
Avg. expression score in LCM sample: '92.3176'
Tissue used: 'pure endosperm, no chalazal'
AT3G56408 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.10382 x 10-1 5 2 5 3 71.43% 37.50% 7 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.435699'
Avg. expression score for this sample: '12.3434'
Avg. expression score in LCM sample: '13.4927'
Tissue used: 'pure endosperm, no chalazal'
AT3G56408 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 2 5 2 77.78% 28.57% 9 7 TAIR8 Avg. embryo expression (dissected): '28.9297'
Avg. embryo expression (LCM): '16.7155'
AT3G56408 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.4 x 10-4 36 0 100.00% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56408 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.63711 x 10-1 31 1 8 9 96.88% 52.94% 32 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.435699'
Avg. expression score for this sample: '24.9837'
Avg. expression score in LCM sample: '13.4927'
Tissue used: 'full endosperm'
AT3G56408 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.40425 x 10-1 16 3 84.21% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56408 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56400 WRKY70 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56400 WRKY70 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 16 2 88.89% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56400 WRKY70 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56400 WRKY70 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '4.07817'
Avg. embryo expression (LCM): '0'
AT3G56400 WRKY70 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.466534'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G56400 WRKY70 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.61873'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G56390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G56390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G56390 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56390 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56390 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G56390 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56380 RR17 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56380 RR17 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G56380 RR17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G56380 RR17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.365707'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G56380 RR17 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56380 RR17 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.803 x 10-3 19 0 100.00% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.64638 x 10-1 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.37304 x 10-1 23 48 8 12 32.39% 60.00% 71 20 TAIR8 Avg. embryo expression (dissected): '598.341'
Avg. embryo expression (LCM): '622.591'
AT3G56370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.93134 x 10-1 12 7 63.16% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 18 16 9 31 52.94% 77.50% 34 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.787086'
Avg. expression score for this sample: '198.411'
Avg. expression score in LCM sample: '152.873'
Tissue used: 'full endosperm'
AT3G56370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.25975 x 10-1 14 11 3 20 56.00% 86.96% 25 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.787086'
Avg. expression score for this sample: '175.884'
Avg. expression score in LCM sample: '152.873'
Tissue used: 'pure endosperm, no chalazal'
AT3G56360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1203.8'
Avg. expression score in LCM sample: '362.157'
Tissue used: 'pure endosperm, no chalazal'
AT3G56360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2917.78'
Avg. expression score in LCM sample: '362.157'
Tissue used: 'full endosperm'
AT3G56360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '603.468'
Avg. embryo expression (LCM): '276.691'
AT3G56350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G56350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '132.115'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G56350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.22473'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G56350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.8 x 10-9 174 36 82.86% 210 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56340 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.2 x 10-26 683 132 83.80% 815 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56340 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.32854 x 10-1 293 193 60.29% 486 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.6 x 10-11 326 747 56 148 30.38% 72.55% 1073 204 TAIR8 Avg. embryo expression (dissected): '4131.76'
Avg. embryo expression (LCM): '3513.76'
AT3G56340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.85 x 10-3 184 258 82 317 41.63% 79.45% 442 399 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.071992'
Avg. expression score for this sample: '1948.43'
Avg. expression score in LCM sample: '580.876'
Tissue used: 'pure endosperm, no chalazal'
AT3G56340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.57515 x 10-1 110 120 66 301 47.83% 82.02% 230 367 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.071992'
Avg. expression score for this sample: '760.525'
Avg. expression score in LCM sample: '580.876'
Tissue used: 'full endosperm'
AT3G56330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 2 3 50.00% 60.00% 2 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.302829'
Avg. expression score for this sample: '57.4276'
Avg. expression score in LCM sample: '114.056'
Tissue used: 'full endosperm'
AT3G56330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.78895 x 10-1 2 0 7 1 100.00% 12.50% 2 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.302829'
Avg. expression score for this sample: '123.993'
Avg. expression score in LCM sample: '114.056'
Tissue used: 'pure endosperm, no chalazal'
AT3G56330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.82838 x 10-1 5 4 55.56% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G56330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.66667 x 10-1 0 3 2 0 0.00% 0.00% 3 2 TAIR8 Avg. embryo expression (dissected): '191.806'
Avg. embryo expression (LCM): '215.128'
AT3G56330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'