Displaying data sets 68901 - 69000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G57420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.47675 x 10-1 27 4 87.10% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '91.3567'
Avg. embryo expression (LCM): '97.9192'
AT3G57420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.9006 x 10-2 10 7 1 27 58.82% 96.43% 17 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.110621'
Avg. expression score for this sample: '216.449'
Avg. expression score in LCM sample: '62.3045'
Tissue used: 'full endosperm'
AT3G57420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.110621'
Avg. expression score for this sample: '104.407'
Avg. expression score in LCM sample: '62.3045'
Tissue used: 'pure endosperm, no chalazal'
AT3G57410 VLN3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 3 3 5 57.14% 62.50% 7 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.052369'
Avg. expression score for this sample: '98.3937'
Avg. expression score in LCM sample: '62.1428'
Tissue used: 'pure endosperm, no chalazal'
AT3G57410 VLN3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.6015 x 10-2 27 1 96.43% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57410 VLN3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.5151 x 10-2 2 3 40.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57410 VLN3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0122 x 10-2 23 7 3 35 76.67% 92.11% 30 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.052369'
Avg. expression score for this sample: '162.062'
Avg. expression score in LCM sample: '62.1428'
Tissue used: 'full endosperm'
AT3G57410 VLN3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 5 0 0 44.44% 9 0 TAIR8 Avg. embryo expression (dissected): '61.0693'
Avg. embryo expression (LCM): '100.017'
AT3G57410 VLN3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.0948 x 10-2 41 3 93.18% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.2 x 10-5 24 36 40.00% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 28 36 27 33 43.75% 55.00% 64 60 TAIR8 Avg. embryo expression (dissected): '98.2272'
Avg. embryo expression (LCM): '50.3725'
AT3G57400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.82257 x 10-1 254 164 69 165 60.77% 70.51% 418 234 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.857358'
Avg. expression score for this sample: '215.201'
Avg. expression score in LCM sample: '49.9435'
Tissue used: 'full endosperm'
AT3G57400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.252 x 10-3 139 43 76.37% 182 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57400 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.4 x 10-5 55 6 90.16% 61 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.79754 x 10-1 112 71 71 205 61.20% 74.28% 183 276 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.857358'
Avg. expression score for this sample: '211.459'
Avg. expression score in LCM sample: '49.9435'
Tissue used: 'pure endosperm, no chalazal'
AT3G57390 AGL18 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 1 0 100.00% 0.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000134'
Avg. expression score for this sample: '122.225'
Avg. expression score in LCM sample: '56.3371'
Tissue used: 'pure endosperm, no chalazal'
AT3G57390 AGL18 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57390 AGL18 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3557 x 10-2 57 0 100.00% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57390 AGL18 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.1 x 10-5 40 1 7 41 97.56% 85.42% 41 48 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000134'
Avg. expression score for this sample: '604.693'
Avg. expression score in LCM sample: '56.3371'
Tissue used: 'full endosperm'
AT3G57390 AGL18 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '8.1575'
Avg. embryo expression (LCM): '7.66073'
AT3G57390 AGL18 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.3631 x 10-2 44 13 77.19% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57380 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.68911 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57380 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.37186 x 10-1 5 3 0 1 62.50% 100.00% 8 1 TAIR8 Avg. embryo expression (dissected): '4.28809'
Avg. embryo expression (LCM): '14.2038'
AT3G57380 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4 x 10-7 59 0 100.00% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 4 3 7 63.64% 70.00% 11 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.30525'
Avg. expression score in LCM sample: '4.98259'
Tissue used: 'pure endosperm, no chalazal'
AT3G57380 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.38235 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 16 4 11 15 80.00% 57.69% 20 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '18.4333'
Avg. expression score in LCM sample: '4.98259'
Tissue used: 'full endosperm'
AT3G57370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 6 2 0 2 75.00% 100.00% 8 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.640405'
Avg. expression score for this sample: '2.6519'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G57370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '1.34908'
Avg. embryo expression (LCM): '0'
AT3G57370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.640405'
Avg. expression score for this sample: '.476607'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G57360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 0 50.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.92057'
Avg. expression score in LCM sample: '1.88133'
Tissue used: 'pure endosperm, no chalazal'
AT3G57360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2042 x 10-2 19 0 100.00% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 0 3 2 100.00% 40.00% 4 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '23.768'
Avg. expression score in LCM sample: '1.88133'
Tissue used: 'full endosperm'
AT3G57360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 11 5 68.75% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '28.7584'
Avg. embryo expression (LCM): '19.2774'
AT3G57350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.6347 x 10-2 70 39 18 18 64.22% 50.00% 109 36 TAIR8 Avg. embryo expression (dissected): '109.064'
Avg. embryo expression (LCM): '84.695'
AT3G57350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.61389 x 10-1 70 27 72.16% 97 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.49618 x 10-1 107 56 65.64% 163 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.69306 x 10-1 23 9 18 15 71.88% 45.45% 32 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.626771'
Avg. expression score for this sample: '40.1576'
Avg. expression score in LCM sample: '26.9854'
Tissue used: 'pure endosperm, no chalazal'
AT3G57350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.34712 x 10-1 5 7 41.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 37 26 31 74 58.73% 70.48% 63 105 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.626771'
Avg. expression score for this sample: '50.9965'
Avg. expression score in LCM sample: '26.9854'
Tissue used: 'full endosperm'
AT3G57340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.54545 x 10-1 3 0 0 3 100.00% 100.00% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '218.501'
Avg. expression score in LCM sample: '61.7165'
Tissue used: 'full endosperm'
AT3G57340 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.6087 x 10-2 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28571 x 10-1 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Avg. embryo expression (dissected): '71.9099'
Avg. embryo expression (LCM): '71.5085'
AT3G57340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.05495 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57340 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.1783 x 10-2 16 1 94.12% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.2381 x 10-1 0 2 2 1 0.00% 33.33% 2 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '97.8623'
Avg. expression score in LCM sample: '61.7165'
Tissue used: 'pure endosperm, no chalazal'
AT3G57330 ACA11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 2 50.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.31677'
Avg. expression score for this sample: '19.4947'
Avg. expression score in LCM sample: '.455635'
Tissue used: 'pure endosperm, no chalazal'
AT3G57330 ACA11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.53846 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57330 ACA11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.66667 x 10-1 60 0 100.00% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57330 ACA11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.1 3 0 0 5 100.00% 100.00% 3 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.31677'
Avg. expression score for this sample: '65.6533'
Avg. expression score in LCM sample: '.455635'
Tissue used: 'full endosperm'
AT3G57330 ACA11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '26.6299'
Avg. embryo expression (LCM): '8.84124'
AT3G57330 ACA11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.25 36 0 100.00% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6.1376'
Avg. embryo expression (LCM): '12.1316'
AT3G57320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.58149'
Avg. expression score in LCM sample: '2.36636'
Tissue used: 'pure endosperm, no chalazal'
AT3G57320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '13.0712'
Avg. expression score in LCM sample: '2.36636'
Tissue used: 'full endosperm'
AT3G57310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.82007'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G57310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.86702'
Avg. embryo expression (LCM): '0'
AT3G57310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.29794'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G57300 INO80 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.25332 x 10-1 70 27 37 48 72.16% 56.47% 97 85 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000733'
Avg. expression score for this sample: '159.976'
Avg. expression score in LCM sample: '79.2952'
Tissue used: 'pure endosperm, no chalazal'
AT3G57300 INO80 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 28 10 73.68% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57300 INO80 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.862 x 10-3 551 128 81.15% 679 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57300 INO80 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.5 x 10-5 253 61 83 233 80.57% 73.73% 314 316 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000733'
Avg. expression score for this sample: '273.116'
Avg. expression score in LCM sample: '79.2952'
Tissue used: 'full endosperm'
AT3G57300 INO80 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.81242 x 10-1 583 181 76.31% 764 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57300 INO80 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.0314 x 10-1 42 43 22 16 49.41% 42.11% 85 38 TAIR8 Avg. embryo expression (dissected): '166.116'
Avg. embryo expression (LCM): '104.073'
AT3G57290 EIF3E embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '386.326'
Avg. embryo expression (LCM): '593.217'
AT3G57290 EIF3E endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57290 EIF3E endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57290 EIF3E endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '188.259'
Avg. expression score in LCM sample: '140.439'
Tissue used: 'pure endosperm, no chalazal'
AT3G57290 EIF3E endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57290 EIF3E endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '250.34'
Avg. expression score in LCM sample: '140.439'
Tissue used: 'full endosperm'
AT3G57280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.117 x 10-3 66 17 6 46 79.52% 88.46% 83 52 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.264516'
Avg. expression score for this sample: '51.5134'
Avg. expression score in LCM sample: '27.2646'
Tissue used: 'full endosperm'
AT3G57280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.942 x 10-3 44 5 89.80% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.39334 x 10-1 25 38 9 11 39.68% 55.00% 63 20 TAIR8 Avg. embryo expression (dissected): '52.5166'
Avg. embryo expression (LCM): '62.5417'
AT3G57280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.6 x 10-5 34 0 100.00% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.13423 x 10-1 42 13 76.36% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.76737 x 10-1 22 22 19 31 50.00% 62.00% 44 50 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.264516'
Avg. expression score for this sample: '46.4619'
Avg. expression score in LCM sample: '27.2646'
Tissue used: 'pure endosperm, no chalazal'
AT3G57270 BG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.430949'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G57270 BG1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57270 BG1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 144 46 75.79% 190 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57270 BG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G57270 BG1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G57270 BG1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 607 490 55.33% 1097 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57260 BGL2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57260 BGL2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G57260 BGL2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57260 BGL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G57260 BGL2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G57260 BGL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'