Displaying data sets 68001 - 68100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G58840 PMD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.02199 x 10-1 46 33 16 41 58.23% 71.93% 79 57 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.077226'
Avg. expression score for this sample: '818.237'
Avg. expression score in LCM sample: '129.959'
Tissue used: 'pure endosperm, no chalazal'
AT3G58840 PMD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.1885 x 10-2 146 63 68 218 69.86% 76.22% 209 286 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.077226'
Avg. expression score for this sample: '1360.13'
Avg. expression score in LCM sample: '129.959'
Tissue used: 'full endosperm'
AT3G58840 PMD1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.96905 x 10-1 20 5 80.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58840 PMD1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.228 x 10-3 446 119 78.94% 565 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58830 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58830 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58830 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58830 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '64.2015'
Avg. embryo expression (LCM): '91.7278'
AT3G58830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '38.5602'
Avg. expression score in LCM sample: '15.3299'
Tissue used: 'full endosperm'
AT3G58830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '25.1433'
Avg. expression score in LCM sample: '15.3299'
Tissue used: 'pure endosperm, no chalazal'
AT3G58820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 0 1 66.67% 100.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.323077'
Avg. expression score for this sample: '40.9854'
Avg. expression score in LCM sample: '17.8286'
Tissue used: 'pure endosperm, no chalazal'
AT3G58820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 0 0 1 100.00% 100.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.323077'
Avg. expression score for this sample: '32.0057'
Avg. expression score in LCM sample: '17.8286'
Tissue used: 'full endosperm'
AT3G58820 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 1 2 0.00% 66.67% 1 3 TAIR8 Avg. embryo expression (dissected): '68.0576'
Avg. embryo expression (LCM): '65.9953'
AT3G58820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.77778 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58810 MTPA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 13 10 56.52% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58810 MTPA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.77213 x 10-1 18 6 3 0 75.00% 0.00% 24 3 TAIR8 Avg. embryo expression (dissected): '34.7689'
Avg. embryo expression (LCM): '24.6274'
AT3G58810 MTPA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 14 4 6 8 77.78% 57.14% 18 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.333409'
Avg. expression score for this sample: '17.4419'
Avg. expression score in LCM sample: '5.04138'
Tissue used: 'full endosperm'
AT3G58810 MTPA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.198 x 10-2 7 5 10 2 58.33% 16.67% 12 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.333409'
Avg. expression score for this sample: '19.5092'
Avg. expression score in LCM sample: '5.04138'
Tissue used: 'pure endosperm, no chalazal'
AT3G58810 MTPA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.02 x 10-4 17 0 100.00% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58810 MTPA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58800 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.40533 x 10-1 9 3 75.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58800 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.08 x 10-4 27 1 96.43% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58800 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.11053 x 10-1 20 16 1 5 55.56% 83.33% 36 6 TAIR8 Avg. embryo expression (dissected): '41.8658'
Avg. embryo expression (LCM): '36.5203'
AT3G58800 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.4489 x 10-2 47 10 82.46% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.22218 x 10-1 9 12 10 11 42.86% 52.38% 21 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.693078'
Avg. expression score for this sample: '28.5185'
Avg. expression score in LCM sample: '26.2358'
Tissue used: 'pure endosperm, no chalazal'
AT3G58800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.01199 x 10-1 24 15 8 36 61.54% 81.82% 39 44 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.693078'
Avg. expression score for this sample: '33.6715'
Avg. expression score in LCM sample: '26.2358'
Tissue used: 'full endosperm'
AT3G58795 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '11.3601'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G58795 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.64692'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G58795 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58795 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58795 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58795 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '16.411'
Avg. embryo expression (LCM): '0'
AT3G58790 GAUT15 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '121.143'
Avg. embryo expression (LCM): '10.6622'
AT3G58790 GAUT15 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58790 GAUT15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '132.315'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G58790 GAUT15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '362.898'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G58790 GAUT15 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58790 GAUT15 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58780 SHP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 142 3 97.93% 145 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58780 SHP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58780 SHP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 64 1 98.46% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58780 SHP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 2 1 0 33.33% 0.00% 3 1 TAIR8 Avg. embryo expression (dissected): '16.2459'
Avg. embryo expression (LCM): '2.09728'
AT3G58780 SHP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.1 x 10-9 26 2 0 65 92.86% 100.00% 28 65 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.5e-09'
Avg. expression score for this sample: '154.353'
Avg. expression score in LCM sample: '2.45455'
Tissue used: 'full endosperm'
AT3G58780 SHP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 3 100.00% 100.00% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.5e-09'
Avg. expression score for this sample: '56.4095'
Avg. expression score in LCM sample: '2.45455'
Tissue used: 'pure endosperm, no chalazal'
AT3G58770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.69921 x 10-1 2 3 3 3 40.00% 50.00% 5 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.6076'
Avg. expression score in LCM sample: '2.16059'
Tissue used: 'pure endosperm, no chalazal'
AT3G58770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.07985 x 10-1 11 3 1 2 78.57% 66.67% 14 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.39935'
Avg. expression score in LCM sample: '2.16059'
Tissue used: 'full endosperm'
AT3G58770 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58770 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58770 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 3 4 2 62.50% 33.33% 8 6 TAIR8 Avg. embryo expression (dissected): '15.4196'
Avg. embryo expression (LCM): '15.2461'
AT3G58770 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.02942 x 10-1 101 39 72.14% 140 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.77087 x 10-1 16 13 1 5 55.17% 83.33% 29 6 TAIR8 Avg. embryo expression (dissected): '48.4332'
Avg. embryo expression (LCM): '37.6632'
AT3G58760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.52036 x 10-1 173 52 155 193 76.89% 55.46% 225 348 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.423184'
Avg. expression score for this sample: '122.427'
Avg. expression score in LCM sample: '330.115'
Tissue used: 'full endosperm'
AT3G58760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 118 41 64 90 74.21% 58.44% 159 154 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.423184'
Avg. expression score for this sample: '228.25'
Avg. expression score in LCM sample: '330.115'
Tissue used: 'pure endosperm, no chalazal'
AT3G58760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8 x 10-13 140 12 92.11% 152 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.2352 x 10-2 24 26 48.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58750 CSY2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.909 x 10-3 38 4 90.48% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58750 CSY2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.9 x 10-26 490 18 96.46% 508 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58750 CSY2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.41672 x 10-1 51 29 25 17 63.75% 40.48% 80 42 TAIR8 Avg. embryo expression (dissected): '220.631'
Avg. embryo expression (LCM): '115.928'
AT3G58750 CSY2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.23 x 10-4 226 40 84.96% 266 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58750 CSY2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.02065 x 10-1 51 21 30 45 70.83% 60.00% 72 75 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.115514'
Avg. expression score for this sample: '168.279'
Avg. expression score in LCM sample: '94.0961'
Tissue used: 'pure endosperm, no chalazal'
AT3G58750 CSY2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.3832 x 10-2 115 28 27 63 80.42% 70.00% 143 90 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.115514'
Avg. expression score for this sample: '201.213'
Avg. expression score in LCM sample: '94.0961'
Tissue used: 'full endosperm'
AT3G58740 CSY1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.94425 x 10-1 231 75 147 182 75.49% 55.32% 306 329 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.316019'
Avg. expression score for this sample: '2364.78'
Avg. expression score in LCM sample: '3288.13'
Tissue used: 'full endosperm'
AT3G58740 CSY1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.01875 x 10-1 216 55 136 124 79.70% 47.69% 271 260 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.316019'
Avg. expression score for this sample: '4024.07'
Avg. expression score in LCM sample: '3288.13'
Tissue used: 'pure endosperm, no chalazal'
AT3G58740 CSY1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.5566 x 10-2 13 1 92.86% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58740 CSY1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.27847 x 10-1 57 41 58.16% 98 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58740 CSY1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58740 CSY1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.51186 x 10-1 5 5 3 6 50.00% 66.67% 10 9 TAIR8 Avg. embryo expression (dissected): '283.415'
Avg. embryo expression (LCM): '46.3537'
AT3G58730 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 2 1 0 66.67% 0.00% 6 1 TAIR8 Avg. embryo expression (dissected): '228.429'
Avg. embryo expression (LCM): '307.723'
AT3G58730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.4154 x 10-2 69 29 70.41% 98 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 1 2 5 75.00% 71.43% 4 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002507'
Avg. expression score for this sample: '243.29'
Avg. expression score in LCM sample: '246.998'
Tissue used: 'pure endosperm, no chalazal'
AT3G58730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.305 x 10-3 61 9 25 87 87.14% 77.68% 70 112 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002507'
Avg. expression score for this sample: '360.824'
Avg. expression score in LCM sample: '246.998'
Tissue used: 'full endosperm'
AT3G58730 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.6966 x 10-2 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.4 x 10-7 155 4 97.48% 159 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58720 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58720 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58720 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58720 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.21813'
Avg. embryo expression (LCM): '0'
AT3G58720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.51116'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G58720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.69068'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G58710 WRKY69 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.93517'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G58710 WRKY69 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.82187'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G58710 WRKY69 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58710 WRKY69 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58710 WRKY69 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6.2283'
Avg. embryo expression (LCM): '1.0926'
AT3G58710 WRKY69 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58700 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58700 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '753.622'
Avg. embryo expression (LCM): '1035.56'
AT3G58700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '409.826'
Avg. expression score in LCM sample: '167.497'
Tissue used: 'full endosperm'
AT3G58700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '368.196'
Avg. expression score in LCM sample: '167.497'
Tissue used: 'pure endosperm, no chalazal'
AT3G58700 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58700 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58690 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58690 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2471 x 10-2 13 0 100.00% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58690 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 0 1 0 100.00% 0.00% 2 1 TAIR8 Avg. embryo expression (dissected): '56.6367'
Avg. embryo expression (LCM): '27.0637'
AT3G58690 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G58690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.02829 x 10-1 5 1 9 2 83.33% 18.18% 6 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '57.4059'
Avg. expression score in LCM sample: '17.2847'
Tissue used: 'pure endosperm, no chalazal'
AT3G58690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.69956 x 10-1 16 4 3 8 80.00% 72.73% 20 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '62.2109'
Avg. expression score in LCM sample: '17.2847'
Tissue used: 'full endosperm'