| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G378906 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2337 | 1274 | 2242 | 1409 | 64.72% | 38.59% | 3611 | 3651 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G378906 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1863 | 352 | 1174 | 817 | 84.11% | 41.03% | 2215 | 1991 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G378872 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 6 | 0 | 100.00% | 0.00% | 8 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G378872 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 14 | 0 | 0.00% | 0 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G378852 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 3 | 2 | 6 | 76.92% | 75.00% | 13 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0522036' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G378852 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.299399 x 10-1 | 9 | 8 | 3 | 34 | 52.94% | 91.89% | 17 | 37 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2299399' χ2 p-value for Mo17 x B73: '.0011342' Biased in favor of strain: '' |
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| GRMZM2G378836 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.574625 x 10-1 | 12 | 5 | 15 | 16 | 70.59% | 51.61% | 17 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0895551' χ2 p-value for Mo17 x B73: '.8574625' Biased in favor of strain: '' |
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| GRMZM2G378836 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 7 | 0.00% | 100.00% | 2 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.0613688' Biased in favor of strain: '' |
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| GRMZM2G378762 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G378762 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 2 | 3 | 6 | 33.33% | 66.67% | 3 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206667' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM2G378653 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.20679 x 10-2 | 63 | 43 | 63 | 43 | 59.43% | 40.57% | 106 | 106 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0520679' χ2 p-value for Mo17 x B73: '.0520679' Biased in favor of strain: '' |
||||
| GRMZM2G378653 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.327674 x 10-1 | 10 | 2 | 20 | 32 | 83.33% | 61.54% | 12 | 52 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.220676' χ2 p-value for Mo17 x B73: '.4327674' Biased in favor of strain: '' |
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| GRMZM2G378604 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.679208 x 10-1 | 30 | 13 | 50 | 43 | 69.77% | 46.24% | 43 | 93 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0095288' χ2 p-value for Mo17 x B73: '.4679208' Biased in favor of strain: '' |
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| GRMZM2G378604 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.4 x 10-29 | 305 | 12 | 366 | 54 | 96.21% | 12.86% | 317 | 420 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.41e-29' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G378580 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.7018 x 10-3 | 1283 | 1066 | 986 | 867 | 54.62% | 46.79% | 2349 | 1853 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.56e-06' χ2 p-value for Mo17 x B73: '.0057018' Biased in favor of strain: 'B73' |
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| GRMZM2G378580 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.42 x 10-5 | 242 | 71 | 183 | 192 | 77.32% | 51.20% | 313 | 375 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000642' χ2 p-value for Mo17 x B73: '2.10e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G378547 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.35 x 10-6 | 326 | 205 | 397 | 272 | 61.39% | 40.66% | 531 | 669 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.51e-07' χ2 p-value for Mo17 x B73: '1.35e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G378547 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.655091 x 10-1 | 14 | 12 | 28 | 9 | 53.85% | 24.32% | 26 | 37 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1655091' χ2 p-value for Mo17 x B73: '4.66e-08' Biased in favor of strain: '' |
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| GRMZM2G378442 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.48 x 10-22 | 792 | 321 | 270 | 87 | 71.16% | 24.37% | 1113 | 357 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.48e-22' Biased in favor of strain: 'B73' |
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| GRMZM2G378442 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.68 x 10-7 | 82 | 8 | 125 | 106 | 91.11% | 45.89% | 90 | 231 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.68e-07' χ2 p-value for Mo17 x B73: '2.09e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G378402 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 2 | 0 | 100.00% | 0.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G378402 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 20 | 0 | 100.00% | 0.00% | 3 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '2.54e-10' Biased in favor of strain: '' |
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| GRMZM2G378215 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.581 x 10-3 | 33 | 14 | 65 | 23 | 70.21% | 26.14% | 47 | 88 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.005581' χ2 p-value for Mo17 x B73: '7.56e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G378215 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G378073 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.05689 x 10-2 | 7 | 16 | 8 | 26 | 30.43% | 76.47% | 23 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0605689' χ2 p-value for Mo17 x B73: '.002022' Biased in favor of strain: '' |
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| GRMZM2G378073 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 2 | 0.00% | 100.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G377780 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 3 | 6 | 11 | 62.50% | 64.71% | 8 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795001' χ2 p-value for Mo17 x B73: '.2252529' Biased in favor of strain: '' |
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| GRMZM2G377780 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 0 | 0.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G377694 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 0 | 4 | 0 | 100.00% | 0.00% | 9 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026998' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G377694 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G377663 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 11 | 0 | 5 | 0.00% | 100.00% | 11 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009111' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: '' |
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| GRMZM2G377663 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G377647 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 6 | 6 | 5 | 33.33% | 45.45% | 9 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.7630246' Biased in favor of strain: '' |
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| GRMZM2G377647 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G377615 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.150006 x 10-1 | 140 | 35 | 58 | 62 | 80.00% | 51.67% | 175 | 120 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.07e-15' χ2 p-value for Mo17 x B73: '.7150006' Biased in favor of strain: '' |
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| GRMZM2G377615 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.034443 x 10-1 | 134 | 84 | 114 | 168 | 61.47% | 59.57% | 218 | 282 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1034443' χ2 p-value for Mo17 x B73: '.011522' Biased in favor of strain: '' |
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| GRMZM2G377613 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.68 x 10-19 | 526 | 271 | 487 | 233 | 66.00% | 32.36% | 797 | 720 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.68e-19' χ2 p-value for Mo17 x B73: '2.91e-21' Biased in favor of strain: 'B73' |
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| GRMZM2G377613 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 5 | 4 | 12 | 28.57% | 75.00% | 7 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0325079' χ2 p-value for Mo17 x B73: '.4795002' Biased in favor of strain: '' |
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| GRMZM2G377609 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 3 | 0 | 50.00% | 0.00% | 2 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G377609 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G377600 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 4182 | 1007 | 3822 | 913 | 80.59% | 19.28% | 5189 | 4735 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G377600 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1907 | 132 | 1236 | 285 | 93.53% | 18.74% | 2039 | 1521 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G377553 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 2 | 3 | 66.67% | 60.00% | 3 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: '' |
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| GRMZM2G377553 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G377539 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1144 | 0 | 1076 | 0 | 100.00% | 0.00% | 1144 | 1076 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G377539 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 876 | 1 | 555 | 0 | 99.89% | 0.00% | 877 | 555 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G377487 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.6 x 10-9 | 290 | 160 | 276 | 155 | 64.44% | 35.96% | 450 | 431 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.88e-10' χ2 p-value for Mo17 x B73: '5.60e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G377487 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 1.2 x 10-6 | 51 | 62 | 84 | 33 | 45.13% | 28.21% | 113 | 117 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.20e-06' χ2 p-value for Mo17 x B73: '1.09e-18' Biased in favor of strain: '' |
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| GRMZM2G377373 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 5 | 0 | 3 | 0.00% | 100.00% | 5 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G377373 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G377369 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.047689 x 10-1 | 443 | 272 | 276 | 247 | 61.96% | 47.23% | 715 | 523 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.61e-10' χ2 p-value for Mo17 x B73: '.2047689' Biased in favor of strain: '' |
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| GRMZM2G377369 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.81 x 10-27 | 732 | 141 | 340 | 284 | 83.85% | 45.51% | 873 | 624 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.81e-27' χ2 p-value for Mo17 x B73: '3.66e-29' Biased in favor of strain: 'B73' |
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| GRMZM2G377311 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.772439 x 10-1 | 63 | 54 | 52 | 45 | 53.85% | 46.39% | 117 | 97 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4053805' χ2 p-value for Mo17 x B73: '.4772439' Biased in favor of strain: '' |
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| GRMZM2G377311 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.579687 x 10-1 | 49 | 29 | 44 | 81 | 62.82% | 64.80% | 78 | 125 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4711428' χ2 p-value for Mo17 x B73: '.6579687' Biased in favor of strain: '' |
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| GRMZM2G377250 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 2 | 10 | 1 | 77.78% | 9.09% | 9 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0955807' χ2 p-value for Mo17 x B73: '.0066556' Biased in favor of strain: '' |
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| GRMZM2G377250 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.4251 x 10-3 | 25 | 1 | 26 | 0 | 96.15% | 0.00% | 26 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0014251' χ2 p-value for Mo17 x B73: '5.55e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G377215 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.44454 x 10-1 | 52 | 46 | 36 | 21 | 53.06% | 36.84% | 98 | 57 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.544454' χ2 p-value for Mo17 x B73: '.0469447' Biased in favor of strain: '' |
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| GRMZM2G377215 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.482129 x 10-1 | 14 | 3 | 22 | 32 | 82.35% | 59.26% | 17 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1700716' χ2 p-value for Mo17 x B73: '.2482129' Biased in favor of strain: '' |
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| GRMZM2G377194 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.32 x 10-4 | 12 | 0 | 18 | 0 | 100.00% | 0.00% | 12 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: 'B73' |
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| GRMZM2G377194 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G377165 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.333951 x 10-1 | 434 | 338 | 381 | 364 | 56.22% | 48.86% | 772 | 745 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0005501' χ2 p-value for Mo17 x B73: '.5333951' Biased in favor of strain: '' |
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| GRMZM2G377165 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.942928 x 10-1 | 925 | 459 | 637 | 1126 | 66.84% | 63.87% | 1384 | 1763 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8942928' χ2 p-value for Mo17 x B73: '.0126876' Biased in favor of strain: '' |
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| GRMZM2G377131 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.24 x 10-26 | 558 | 255 | 556 | 226 | 68.63% | 28.90% | 813 | 782 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.24e-26' χ2 p-value for Mo17 x B73: '3.87e-32' Biased in favor of strain: 'B73' |
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| GRMZM2G377131 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.016553 x 10-1 | 51 | 18 | 29 | 39 | 73.91% | 57.35% | 69 | 68 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2016553' χ2 p-value for Mo17 x B73: '.1032629' Biased in favor of strain: '' |
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| GRMZM2G377123 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 2 | 0.00% | 100.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G377123 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G377115 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 20 | 17 | 14 | 14 | 54.05% | 50.00% | 37 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6218734' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G377115 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.680992 x 10-1 | 16 | 7 | 13 | 13 | 69.57% | 50.00% | 23 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7680992' χ2 p-value for Mo17 x B73: '.0714234' Biased in favor of strain: '' |
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| GRMZM2G377113 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5529 x 10-3 | 161 | 109 | 193 | 89 | 59.63% | 31.56% | 270 | 282 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015529' χ2 p-value for Mo17 x B73: '5.90e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G377113 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 3 | 7 | 100.00% | 70.00% | 3 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.8230634' Biased in favor of strain: '' |
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| GRMZM2G376959 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 2 | 0.00% | 100.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G376959 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G376743 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.158656 x 10-1 | 42 | 27 | 34 | 45 | 60.87% | 56.96% | 69 | 79 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0709515' χ2 p-value for Mo17 x B73: '.2158656' Biased in favor of strain: '' |
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| GRMZM2G376743 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G376731 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.76 x 10-14 | 462 | 229 | 348 | 173 | 66.86% | 33.21% | 691 | 521 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.74e-19' χ2 p-value for Mo17 x B73: '1.76e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G376731 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.3 x 10-19 | 535 | 107 | 346 | 269 | 83.33% | 43.74% | 642 | 615 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.30e-19' χ2 p-value for Mo17 x B73: '1.69e-33' Biased in favor of strain: 'B73' |
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| GRMZM2G376727 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.8829 x 10-3 | 1411 | 1013 | 1388 | 1229 | 58.21% | 46.96% | 2424 | 2617 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.28e-16' χ2 p-value for Mo17 x B73: '.0018829' Biased in favor of strain: 'B73' |
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| GRMZM2G376727 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.46355 x 10-2 | 3578 | 1664 | 2018 | 2787 | 68.26% | 58.00% | 5242 | 4805 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0146355' χ2 p-value for Mo17 x B73: '3.50e-37' Biased in favor of strain: '' |
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| GRMZM2G376661 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 0 | 1 | 66.67% | 100.00% | 3 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G376661 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G376595 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 3 | 0.00% | 100.00% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G376595 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 1 | 1 | 0.00% | 50.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: '' |
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| GRMZM2G376548 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 2 | 0 | 100.00% | 0.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G376548 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 4 | 0 | 0.00% | 0 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G376542 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 553 | 146 | 522 | 102 | 79.11% | 16.35% | 699 | 624 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G376542 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1021 | 108 | 673 | 144 | 90.43% | 17.63% | 1129 | 817 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G376416 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 518 | 11 | 543 | 41 | 97.92% | 7.02% | 529 | 584 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G376416 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.994952 x 10-1 | 34 | 10 | 11 | 20 | 77.27% | 64.52% | 44 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1355999' χ2 p-value for Mo17 x B73: '.7994952' Biased in favor of strain: '' |
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| GRMZM2G376282 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.01317 x 10-2 | 181 | 144 | 170 | 81 | 55.69% | 32.27% | 325 | 251 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0401317' χ2 p-value for Mo17 x B73: '1.94e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G376282 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.5515 x 10-3 | 2 | 13 | 0 | 17 | 13.33% | 100.00% | 15 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000118' χ2 p-value for Mo17 x B73: '.0035515' Biased in favor of strain: 'Mo17' |
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| GRMZM2G376265 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 8 | 0 | 100.00% | 0.00% | 4 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G376265 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G376085 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.913413 x 10-1 | 333 | 211 | 200 | 227 | 61.21% | 53.16% | 544 | 427 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.69e-07' χ2 p-value for Mo17 x B73: '.1913413' Biased in favor of strain: '' |
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| GRMZM2G376085 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.7139 x 10-3 | 703 | 426 | 594 | 1551 | 62.27% | 72.31% | 1129 | 2145 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0017139' χ2 p-value for Mo17 x B73: '2.99e-08' Biased in favor of strain: 'Mo17' |
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| GRMZM2G376074 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.3 x 10-29 | 1312 | 727 | 1015 | 570 | 64.35% | 35.96% | 2039 | 1585 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.19e-38' χ2 p-value for Mo17 x B73: '5.25e-29' Biased in favor of strain: 'B73' |
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| GRMZM2G376074 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.05 x 10-12 | 645 | 178 | 451 | 412 | 78.37% | 47.74% | 823 | 863 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.05e-12' χ2 p-value for Mo17 x B73: '4.17e-32' Biased in favor of strain: 'B73' |
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| GRMZM2G376061 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 1 | 50.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G376061 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 3 | 1 | 25.00% | 0 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G375984 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 4592 | 2059 | 3443 | 1821 | 69.04% | 34.59% | 6651 | 5264 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G375984 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 4552 | 1226 | 2903 | 3586 | 78.78% | 55.26% | 5778 | 6489 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |