Displaying data sets 67201 - 67300 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G60090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G60090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G60090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G60090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60080 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.5 x 10-7 94 6 94.00% 100 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60080 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 11 5 68.75% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60080 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.513 x 10-3 40 4 90.91% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.06908 x 10-1 21 18 16 69 53.85% 81.18% 39 85 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.368766'
Avg. expression score for this sample: '673.435'
Avg. expression score in LCM sample: '147.273'
Tissue used: 'pure endosperm, no chalazal'
AT3G60080 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.35902 x 10-1 8 5 3 5 61.54% 62.50% 13 8 TAIR8 Avg. embryo expression (dissected): '239.568'
Avg. embryo expression (LCM): '92.0544'
AT3G60080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.74164 x 10-1 44 21 13 31 67.69% 70.45% 65 44 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.368766'
Avg. expression score for this sample: '258.709'
Avg. expression score in LCM sample: '147.273'
Tissue used: 'full endosperm'
AT3G60075 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G60075 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60075 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60075 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G60075 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60075 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G60070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.89294 x 10-1 7 6 3 17 53.85% 85.00% 13 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.676748'
Avg. expression score for this sample: '133.63'
Avg. expression score in LCM sample: '54.6909'
Tissue used: 'pure endosperm, no chalazal'
AT3G60070 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '16.3845'
Avg. embryo expression (LCM): '13.3498'
AT3G60070 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.04116 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.70837 x 10-1 22 14 13 37 61.11% 74.00% 36 50 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.676748'
Avg. expression score for this sample: '120.454'
Avg. expression score in LCM sample: '54.6909'
Tissue used: 'full endosperm'
AT3G60070 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.9051 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60070 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.41594 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G60060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G60060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.392469'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G60050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.16737 x 10-1 70 20 29 73 77.78% 71.57% 90 102 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.058464'
Avg. expression score for this sample: '175.096'
Avg. expression score in LCM sample: '124.124'
Tissue used: 'full endosperm'
AT3G60050 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.1834 x 10-2 192 44 81.36% 236 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60050 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.3798 x 10-2 14 13 51.85% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60050 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.92851 x 10-1 48 39 21 7 55.17% 25.00% 87 28 TAIR8 Avg. embryo expression (dissected): '281.404'
Avg. embryo expression (LCM): '228.014'
AT3G60050 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.099 x 10-2 111 67 62.36% 178 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.47767 x 10-1 54 14 22 41 79.41% 65.08% 68 63 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.058464'
Avg. expression score for this sample: '174.51'
Avg. expression score in LCM sample: '124.124'
Tissue used: 'pure endosperm, no chalazal'
AT3G60040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.28308 x 10-1 3 0 7 3 100.00% 30.00% 3 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '29.9944'
Avg. expression score in LCM sample: '11.141'
Tissue used: 'pure endosperm, no chalazal'
AT3G60040 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 1 0 0.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '43.1785'
Avg. embryo expression (LCM): '22.5301'
AT3G60040 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.18935 x 10-1 11 3 78.57% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.02562 x 10-1 21 2 7 5 91.30% 41.67% 23 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '33.0452'
Avg. expression score in LCM sample: '11.141'
Tissue used: 'full endosperm'
AT3G60040 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60040 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.93077 x 10-1 22 5 81.48% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60030 SPL12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.6 x 10-19 646 46 93.35% 692 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60030 SPL12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.83836 x 10-1 51 20 71.83% 71 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60030 SPL12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.7 x 10-7 305 34 89.97% 339 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60030 SPL12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.2934 x 10-2 90 29 35 98 75.63% 73.68% 119 133 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.3e-11'
Avg. expression score for this sample: '483.033'
Avg. expression score in LCM sample: '175.64'
Tissue used: 'pure endosperm, no chalazal'
AT3G60030 SPL12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 52 57 16 21 47.71% 56.76% 109 37 TAIR8 Avg. embryo expression (dissected): '304.616'
Avg. embryo expression (LCM): '168.084'
AT3G60030 SPL12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.3 x 10-10 342 71 116 392 82.81% 77.17% 413 508 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.3e-11'
Avg. expression score for this sample: '1244.36'
Avg. expression score in LCM sample: '175.64'
Tissue used: 'full endosperm'
AT3G60020 SK5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G60020 SK5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60020 SK5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60020 SK5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G60020 SK5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60020 SK5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.565087'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G60010 SK13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '26.2551'
Avg. expression score in LCM sample: '22.1792'
Tissue used: 'pure endosperm, no chalazal'
AT3G60010 SK13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G60010 SK13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60010 SK13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.2422'
Avg. expression score in LCM sample: '22.1792'
Tissue used: 'full endosperm'
AT3G60010 SK13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60010 SK13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60000 QWRF6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60000 QWRF6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60000 QWRF6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G60000 QWRF6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '79.2942'
Avg. expression score in LCM sample: '95.8598'
Tissue used: 'pure endosperm, no chalazal'
AT3G60000 QWRF6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.42748'
Avg. embryo expression (LCM): '.828866'
AT3G60000 QWRF6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '40.2837'
Avg. expression score in LCM sample: '95.8598'
Tissue used: 'full endosperm'
AT3G59990 MAP2B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.128 x 10-3 101 34 46 167 74.81% 78.40% 135 213 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005547'
Avg. expression score for this sample: '522.713'
Avg. expression score in LCM sample: '255.773'
Tissue used: 'full endosperm'
AT3G59990 MAP2B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.43 x 10-4 183 29 86.32% 212 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G59990 MAP2B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.3376 x 10-2 22 16 57.89% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G59990 MAP2B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.83792 x 10-1 34 56 7 13 37.78% 65.00% 90 20 TAIR8 Avg. embryo expression (dissected): '462.357'
Avg. embryo expression (LCM): '586.172'
AT3G59990 MAP2B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.30784 x 10-1 187 46 80.26% 233 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G59990 MAP2B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.91408 x 10-1 40 19 21 51 67.80% 70.83% 59 72 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005547'
Avg. expression score for this sample: '390.479'
Avg. expression score in LCM sample: '255.773'
Tissue used: 'pure endosperm, no chalazal'
AT3G59980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 2 1 100.00% 33.33% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.170634'
Avg. expression score for this sample: '83.6108'
Avg. expression score in LCM sample: '64.9354'
Tissue used: 'pure endosperm, no chalazal'
AT3G59980 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '227.422'
Avg. embryo expression (LCM): '363.144'
AT3G59980 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.75025 x 10-1 33 9 78.57% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G59980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.23291 x 10-1 8 1 3 17 88.89% 85.00% 9 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.170634'
Avg. expression score for this sample: '81.6913'
Avg. expression score in LCM sample: '64.9354'
Tissue used: 'full endosperm'
AT3G59980 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.6681 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G59980 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.00065 x 10-1 18 1 94.74% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G59970 MTHFR1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.70697 x 10-1 22 0 100.00% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G59970 MTHFR1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G59970 MTHFR1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.1299 x 10-2 12 9 57.14% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G59970 MTHFR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.394389'
Avg. expression score for this sample: '280.723'
Avg. expression score in LCM sample: '365.905'
Tissue used: 'pure endosperm, no chalazal'
AT3G59970 MTHFR1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 4 1 2 33.33% 66.67% 6 3 TAIR8 Avg. embryo expression (dissected): '771.623'
Avg. embryo expression (LCM): '948.512'
AT3G59970 MTHFR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.89847 x 10-1 6 2 0 7 75.00% 100.00% 8 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.394389'
Avg. expression score for this sample: '768.178'
Avg. expression score in LCM sample: '365.905'
Tissue used: 'full endosperm'
AT3G59960 ASHH4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G59960 ASHH4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G59960 ASHH4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G59960 ASHH4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G59960 ASHH4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G59960 ASHH4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G59950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 2 6 8 77.78% 57.14% 9 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00282'
Avg. expression score for this sample: '44.1866'
Avg. expression score in LCM sample: '25.5891'
Tissue used: 'pure endosperm, no chalazal'
AT3G59950 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 4 2 2 42.86% 50.00% 7 4 TAIR8 Avg. embryo expression (dissected): '33.3735'
Avg. embryo expression (LCM): '19.8677'
AT3G59950 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.8288 x 10-2 54 4 93.10% 58 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G59950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.43 x 10-4 37 18 16 117 67.27% 87.97% 55 133 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00282'
Avg. expression score for this sample: '81.4536'
Avg. expression score in LCM sample: '25.5891'
Tissue used: 'full endosperm'
AT3G59950 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.21 x 10-4 95 4 95.96% 99 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G59950 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.8157 x 10-1 20 3 86.96% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G59940 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G59940 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G59940 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.1049 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G59940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.323077'
Avg. expression score for this sample: '212.083'
Avg. expression score in LCM sample: '63.0247'
Tissue used: 'pure endosperm, no chalazal'