| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G381739 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.118355 x 10-1 | 68 | 43 | 52 | 37 | 61.26% | 41.57% | 111 | 89 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0176493' χ2 p-value for Mo17 x B73: '.1118355' Biased in favor of strain: '' |
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| GRMZM2G381739 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.05121 x 10-2 | 240 | 156 | 139 | 412 | 60.61% | 74.77% | 396 | 551 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0105121' χ2 p-value for Mo17 x B73: '.0000542' Biased in favor of strain: '' |
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| GRMZM2G381589 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 3 | 0 | 100.00% | 0.00% | 2 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G381589 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G381473 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.854468 x 10-1 | 81 | 65 | 95 | 72 | 55.48% | 43.11% | 146 | 167 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1854468' χ2 p-value for Mo17 x B73: '.0751098' Biased in favor of strain: '' |
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| GRMZM2G381473 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.462076 x 10-1 | 73 | 37 | 62 | 94 | 66.36% | 60.26% | 110 | 156 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9462076' χ2 p-value for Mo17 x B73: '.0894292' Biased in favor of strain: '' |
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| GRMZM2G381429 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.23 x 10-5 | 30 | 0 | 28 | 5 | 100.00% | 15.15% | 30 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.32e-08' χ2 p-value for Mo17 x B73: '.0000623' Biased in favor of strain: 'B73' |
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| GRMZM2G381429 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 24 | 0 | 7 | 0 | 100.00% | 0.00% | 24 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: '' |
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| GRMZM2G381404 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.91355 x 10-2 | 1372 | 775 | 561 | 494 | 63.90% | 46.82% | 2147 | 1055 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.52e-38' χ2 p-value for Mo17 x B73: '.0391355' Biased in favor of strain: 'B73' |
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| GRMZM2G381404 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.04 x 10-22 | 436 | 64 | 303 | 269 | 87.20% | 47.03% | 500 | 572 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.04e-22' χ2 p-value for Mo17 x B73: '2.20e-23' Biased in favor of strain: 'B73' |
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| GRMZM2G381395 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.252529 x 10-1 | 10 | 2 | 11 | 6 | 83.33% | 35.29% | 12 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0209213' χ2 p-value for Mo17 x B73: '.2252529' Biased in favor of strain: '' |
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| GRMZM2G381395 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.236585 x 10-1 | 10 | 6 | 10 | 15 | 62.50% | 60.00% | 16 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7236585' χ2 p-value for Mo17 x B73: '.4795' Biased in favor of strain: '' |
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| GRMZM2G381283 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 2 | 5 | 4 | 71.43% | 44.44% | 7 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2568392' χ2 p-value for Mo17 x B73: '.7388827' Biased in favor of strain: '' |
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| GRMZM2G381283 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 2 | 2 | 0 | 33.33% | 0.00% | 3 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206667' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM2G381267 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.351463 x 10-1 | 436 | 408 | 419 | 459 | 51.66% | 52.28% | 844 | 878 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3351463' χ2 p-value for Mo17 x B73: '.177037' Biased in favor of strain: '' |
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| GRMZM2G381267 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.868162 x 10-1 | 259 | 136 | 204 | 413 | 65.57% | 66.94% | 395 | 617 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6436404' χ2 p-value for Mo17 x B73: '.8868162' Biased in favor of strain: '' |
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| GRMZM2G381169 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 10 | 0 | 4 | 0.00% | 100.00% | 10 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015654' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G381169 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 6 | 0 | 10 | 0.00% | 100.00% | 6 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: '' |
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| GRMZM2G381129 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 4 | 1 | 1 | 20.00% | 50.00% | 5 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G381129 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 1 | 100.00% | 50.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: '' |
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| GRMZM2G381086 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.46677 x 10-2 | 253 | 201 | 277 | 198 | 55.73% | 41.68% | 454 | 475 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0146677' χ2 p-value for Mo17 x B73: '.0002892' Biased in favor of strain: 'B73' |
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| GRMZM2G381086 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.612023 x 10-1 | 89 | 54 | 32 | 45 | 62.24% | 58.44% | 143 | 77 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2612023' χ2 p-value for Mo17 x B73: '.1257536' Biased in favor of strain: '' |
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| GRMZM2G381071 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 3 | 2 | 6 | 57.14% | 75.00% | 7 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.705457' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G381071 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G381059 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.9595 x 10-3 | 54 | 24 | 43 | 21 | 69.23% | 32.81% | 78 | 64 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0006817' χ2 p-value for Mo17 x B73: '.0059595' Biased in favor of strain: 'B73' |
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| GRMZM2G381059 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.600666 x 10-1 | 43 | 14 | 37 | 32 | 75.44% | 46.38% | 57 | 69 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1600666' χ2 p-value for Mo17 x B73: '.0003499' Biased in favor of strain: '' |
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| GRMZM2G381051 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.11 x 10-10 | 46 | 3 | 51 | 4 | 93.88% | 7.27% | 49 | 55 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.11e-10' χ2 p-value for Mo17 x B73: '2.34e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G381051 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.0384 x 10-2 | 21 | 3 | 11 | 4 | 87.50% | 26.67% | 24 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.030384' χ2 p-value for Mo17 x B73: '.001015' Biased in favor of strain: '' |
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| GRMZM2G381025 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 25 | 0 | 100.00% | 0.00% | 3 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '5.73e-07' Biased in favor of strain: '' |
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| GRMZM2G381025 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 11 | 0 | 100.00% | 0.00% | 1 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '2.73e-06' Biased in favor of strain: '' |
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| GRMZM2G380955 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.97 x 10-9 | 41 | 0 | 36 | 0 | 100.00% | 0.00% | 41 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.52e-10' χ2 p-value for Mo17 x B73: '1.97e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G380955 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.52 x 10-10 | 82 | 0 | 54 | 0 | 100.00% | 0.00% | 82 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.52e-10' χ2 p-value for Mo17 x B73: '2.69e-25' Biased in favor of strain: 'B73' |
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| GRMZM2G380889 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 11 | 0 | 3 | 0.00% | 100.00% | 11 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009111' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G380889 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G380765 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 1 | 0 | 0.00% | 0.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G380765 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 2 | 1 | 100.00% | 33.33% | 3 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: '' |
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| GRMZM2G380738 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.48085 x 10-2 | 2 | 9 | 8 | 112 | 18.18% | 93.33% | 11 | 120 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0348085' χ2 p-value for Mo17 x B73: '2.23e-21' Biased in favor of strain: 'Mo17' |
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| GRMZM2G380738 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.09 x 10-7 | 2 | 17 | 7 | 154 | 10.53% | 95.65% | 19 | 161 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.09e-07' χ2 p-value for Mo17 x B73: '6.10e-15' Biased in favor of strain: 'Mo17' |
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| GRMZM2G380700 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.54 x 10-10 | 0 | 40 | 3 | 52 | 0.00% | 94.55% | 40 | 55 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.54e-10' χ2 p-value for Mo17 x B73: '3.92e-11' Biased in favor of strain: 'Mo17' |
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| GRMZM2G380700 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.19 x 10-8 | 0 | 24 | 0 | 65 | 0.00% | 100.00% | 24 | 65 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.26e-12' χ2 p-value for Mo17 x B73: '1.19e-08' Biased in favor of strain: 'Mo17' |
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| GRMZM2G380656 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.5 x 10-4 | 778 | 285 | 582 | 706 | 73.19% | 54.81% | 1063 | 1288 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '.00055' Biased in favor of strain: '' |
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| GRMZM2G380656 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 8195 | 1746 | 7997 | 4204 | 82.44% | 34.46% | 9941 | 12201 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G380650 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 0 | 10 | 50.00% | 100.00% | 4 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: '' |
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| GRMZM2G380650 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 1 | 1 | 100.00% | 50.00% | 6 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832656' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: '' |
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| GRMZM2G380518 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.173105 x 10-1 | 10 | 6 | 5 | 10 | 62.50% | 66.67% | 16 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1967056' Biased in favor of strain: '' |
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| GRMZM2G380518 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G380515 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.827897 x 10-1 | 409 | 448 | 363 | 432 | 47.72% | 54.34% | 857 | 795 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1827897' χ2 p-value for Mo17 x B73: '.014398' Biased in favor of strain: '' |
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| GRMZM2G380515 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.784769 x 10-1 | 425 | 242 | 245 | 457 | 63.72% | 65.10% | 667 | 702 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1062013' χ2 p-value for Mo17 x B73: '.3784769' Biased in favor of strain: '' |
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| GRMZM2G380414 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.2 x 10-12 | 29 | 111 | 23 | 113 | 20.71% | 83.09% | 140 | 136 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.20e-12' χ2 p-value for Mo17 x B73: '1.19e-14' Biased in favor of strain: 'Mo17' |
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| GRMZM2G380414 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.01368 x 10-2 | 8 | 31 | 4 | 26 | 20.51% | 86.67% | 39 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.70e-10' χ2 p-value for Mo17 x B73: '.0201368' Biased in favor of strain: '' |
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| GRMZM2G380286 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 7 | 0.00% | 100.00% | 1 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: '' |
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| GRMZM2G380286 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 3 | 10 | 0.00% | 76.92% | 2 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.4327677' Biased in favor of strain: '' |
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| GRMZM2G380280 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.19 x 10-15 | 11 | 89 | 20 | 130 | 11.00% | 86.67% | 100 | 150 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.19e-15' χ2 p-value for Mo17 x B73: '2.67e-19' Biased in favor of strain: 'Mo17' |
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| GRMZM2G380280 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 2 | 0 | 10 | 33.33% | 100.00% | 3 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206667' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: '' |
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| GRMZM2G380112 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 2 | 0 | 100.00% | 0.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G380112 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G380094 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.96158 x 10-2 | 21 | 34 | 29 | 71 | 38.18% | 71.00% | 55 | 100 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0796158' χ2 p-value for Mo17 x B73: '.0000267' Biased in favor of strain: '' |
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| GRMZM2G380094 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.124365 x 10-1 | 36 | 13 | 19 | 15 | 73.47% | 44.12% | 49 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3124365' χ2 p-value for Mo17 x B73: '.0052845' Biased in favor of strain: '' |
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| GRMZM2G380088 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.51 x 10-8 | 86 | 24 | 98 | 36 | 78.18% | 26.87% | 110 | 134 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.39e-09' χ2 p-value for Mo17 x B73: '8.51e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G380088 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 581 | 79 | 219 | 126 | 88.03% | 36.52% | 660 | 345 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.50e-31' χ2 p-value for Mo17 x B73: '1.55e-32' Biased in favor of strain: 'B73' |
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| GRMZM2G380015 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.73 x 10-7 | 614 | 349 | 512 | 363 | 63.76% | 41.49% | 963 | 875 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.35e-17' χ2 p-value for Mo17 x B73: '4.73e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G380015 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.02 x 10-8 | 697 | 168 | 331 | 447 | 80.58% | 57.46% | 865 | 778 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.99e-18' χ2 p-value for Mo17 x B73: '5.02e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G379964 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.66 x 10-14 | 180 | 42 | 144 | 41 | 81.08% | 22.16% | 222 | 185 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.01e-20' χ2 p-value for Mo17 x B73: '3.66e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G379964 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.12 x 10-9 | 150 | 19 | 165 | 57 | 88.76% | 25.68% | 169 | 222 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.12e-09' χ2 p-value for Mo17 x B73: '2.17e-38' Biased in favor of strain: 'B73' |
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| GRMZM2G379898 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.35 x 10-20 | 154 | 362 | 208 | 578 | 29.84% | 73.54% | 516 | 786 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.35e-20' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17' |
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| GRMZM2G379898 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | MEG | 1.828 x 10-4 | 44 | 0 | 0 | 28 | 100.00% | 100.00% | 44 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.73e-06' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: '' |
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| GRMZM2G379804 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.02 x 10-8 | 364 | 225 | 348 | 183 | 61.80% | 34.46% | 589 | 531 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.02e-08' χ2 p-value for Mo17 x B73: '8.04e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G379804 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.14138 x 10-2 | 136 | 44 | 115 | 47 | 75.56% | 29.01% | 180 | 162 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0114138' χ2 p-value for Mo17 x B73: '2.79e-24' Biased in favor of strain: '' |
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| GRMZM2G379773 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 0 | 0.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G379773 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5862 x 10-2 | 20 | 2 | 24 | 9 | 90.91% | 27.27% | 22 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.015862' χ2 p-value for Mo17 x B73: '1.58e-06' Biased in favor of strain: '' |
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| GRMZM2G379770 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 5 | 1 | 0 | 54.55% | 0.00% | 11 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7630246' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G379770 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 2 | 12 | 9 | 60.00% | 42.86% | 5 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7518208' χ2 p-value for Mo17 x B73: '.0206375' Biased in favor of strain: '' |
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| GRMZM2G379758 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1589 | 402 | 1506 | 319 | 79.81% | 17.48% | 1991 | 1825 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G379758 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1891 | 416 | 1294 | 958 | 81.97% | 42.54% | 2307 | 2252 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G379577 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 470 | 112 | 506 | 114 | 80.76% | 18.39% | 582 | 620 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G379577 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.40485 x 10-2 | 42 | 35 | 27 | 22 | 54.55% | 44.90% | 77 | 49 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0240485' χ2 p-value for Mo17 x B73: '.0012272' Biased in favor of strain: '' |
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| GRMZM2G379575 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.164123 x 10-1 | 17 | 21 | 34 | 22 | 44.74% | 39.29% | 38 | 56 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5164123' χ2 p-value for Mo17 x B73: '.1088094' Biased in favor of strain: '' |
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| GRMZM2G379575 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 1 | 0 | 8 | 90.91% | 100.00% | 11 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0880834' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G379445 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.518296 x 10-1 | 24 | 13 | 19 | 21 | 64.86% | 52.50% | 37 | 40 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.070546' χ2 p-value for Mo17 x B73: '.7518296' Biased in favor of strain: '' |
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| GRMZM2G379445 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.799902 x 10-1 | 28 | 11 | 29 | 51 | 71.79% | 63.75% | 39 | 80 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4969231' χ2 p-value for Mo17 x B73: '.5799902' Biased in favor of strain: '' |
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| GRMZM2G379437 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G379437 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 4 | 0 | 2 | 33.33% | 100.00% | 6 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832614' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G379428 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.326223 x 10-1 | 230 | 126 | 108 | 87 | 64.61% | 44.62% | 356 | 195 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.55e-08' χ2 p-value for Mo17 x B73: '.1326223' Biased in favor of strain: '' |
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| GRMZM2G379428 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.544503 x 10-1 | 131 | 36 | 58 | 96 | 78.44% | 62.34% | 167 | 154 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0012453' χ2 p-value for Mo17 x B73: '.2544503' Biased in favor of strain: '' |
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| GRMZM2G379286 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.50792 x 10-1 | 87 | 54 | 62 | 47 | 61.70% | 43.12% | 141 | 109 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.005451' χ2 p-value for Mo17 x B73: '.150792' Biased in favor of strain: '' |
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| GRMZM2G379286 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.5079 x 10-3 | 116 | 32 | 71 | 70 | 78.38% | 49.65% | 148 | 141 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0025079' χ2 p-value for Mo17 x B73: '.0000181' Biased in favor of strain: 'B73' |
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| GRMZM2G379252 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 12 | 3 | 10 | 10 | 80.00% | 50.00% | 15 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0201368' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G379252 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.170881 x 10-1 | 13 | 5 | 6 | 8 | 72.22% | 57.14% | 18 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170881' χ2 p-value for Mo17 x B73: '.4496917' Biased in favor of strain: '' |
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| GRMZM2G379167 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.11 x 10-27 | 3 | 175 | 18 | 162 | 1.69% | 90.00% | 178 | 180 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.00e-38' χ2 p-value for Mo17 x B73: '7.11e-27' Biased in favor of strain: 'Mo17' |
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| GRMZM2G379167 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.1427 x 10-3 | 8 | 76 | 10 | 55 | 9.52% | 84.62% | 84 | 65 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.12e-28' χ2 p-value for Mo17 x B73: '.0021427' Biased in favor of strain: 'Mo17' |
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| GRMZM2G379035 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.87 x 10-5 | 9 | 61 | 9 | 35 | 12.86% | 79.55% | 70 | 44 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.13e-10' χ2 p-value for Mo17 x B73: '.0000887' Biased in favor of strain: 'Mo17' |
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| GRMZM2G379035 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G379021 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.758528 x 10-1 | 418 | 444 | 310 | 418 | 48.49% | 57.42% | 862 | 728 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3758528' χ2 p-value for Mo17 x B73: '.0000626' Biased in favor of strain: '' |
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| GRMZM2G379021 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.113929 x 10-1 | 319 | 195 | 214 | 432 | 62.06% | 66.87% | 514 | 646 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0267914' χ2 p-value for Mo17 x B73: '.9113929' Biased in favor of strain: '' |
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| GRMZM2G379005 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.8764 x 10-3 | 252 | 157 | 203 | 145 | 61.61% | 41.67% | 409 | 348 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.63e-06' χ2 p-value for Mo17 x B73: '.0018764' Biased in favor of strain: 'B73' |
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| GRMZM2G379005 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5422 x 10-3 | 127 | 35 | 107 | 117 | 78.40% | 52.23% | 162 | 224 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015422' χ2 p-value for Mo17 x B73: '4.59e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G379002 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.194916 x 10-1 | 79 | 50 | 72 | 58 | 61.24% | 44.62% | 129 | 130 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0106705' χ2 p-value for Mo17 x B73: '.2194916' Biased in favor of strain: '' |
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| GRMZM2G379002 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.627984 x 10-1 | 44 | 23 | 29 | 39 | 65.67% | 57.35% | 67 | 68 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8627984' χ2 p-value for Mo17 x B73: '.1032629' Biased in favor of strain: '' |
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| GRMZM2G378907 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.2 x 10-16 | 356 | 125 | 267 | 108 | 74.01% | 28.80% | 481 | 375 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.11e-26' χ2 p-value for Mo17 x B73: '2.20e-16' Biased in favor of strain: 'B73' |
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| GRMZM2G378907 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.34 x 10-11 | 606 | 175 | 312 | 272 | 77.59% | 46.58% | 781 | 584 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.34e-11' χ2 p-value for Mo17 x B73: '7.07e-25' Biased in favor of strain: 'B73' |