Displaying data sets 66401 - 66500 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G61260 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.43618 x 10-1 17 6 73.91% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.12795 x 10-1 57 14 47 71 80.28% 60.17% 71 118 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.839652'
Avg. expression score for this sample: '318.843'
Avg. expression score in LCM sample: '79.6333'
Tissue used: 'full endosperm'
AT3G61250 MYB17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.882634'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G61250 MYB17 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61250 MYB17 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61250 MYB17 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61250 MYB17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.747786'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G61250 MYB17 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6.65583'
Avg. embryo expression (LCM): '3.61687'
AT3G61240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.47817 x 10-1 467 407 73 66 53.43% 47.48% 874 139 TAIR8 Avg. embryo expression (dissected): '934.419'
Avg. embryo expression (LCM): '805.394'
AT3G61240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2354 x 10-2 555 174 76.13% 729 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.25747 x 10-1 452 187 206 406 70.74% 66.34% 639 612 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.5e-06'
Avg. expression score for this sample: '922.752'
Avg. expression score in LCM sample: '505.696'
Tissue used: 'pure endosperm, no chalazal'
AT3G61240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.8 x 10-6 652 229 383 1020 74.01% 72.70% 881 1403 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.5e-06'
Avg. expression score for this sample: '768.415'
Avg. expression score in LCM sample: '505.696'
Tissue used: 'full endosperm'
AT3G61240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.0 x 10-6 251 49 83.67% 300 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 854 45 94.99% 899 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61230 PLIM2c endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61230 PLIM2c endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61230 PLIM2c endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.11914'
Avg. expression score in LCM sample: '9.71532'
Tissue used: 'pure endosperm, no chalazal'
AT3G61230 PLIM2c embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.639473'
Avg. embryo expression (LCM): '0'
AT3G61230 PLIM2c endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61230 PLIM2c endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.21654'
Avg. expression score in LCM sample: '9.71532'
Tissue used: 'full endosperm'
AT3G61220 SDR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.23143 x 10-1 4 2 10 6 66.67% 37.50% 6 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.300431'
Avg. expression score for this sample: '221.491'
Avg. expression score in LCM sample: '28.6609'
Tissue used: 'full endosperm'
AT3G61220 SDR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 3 0 1 62.50% 100.00% 8 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.300431'
Avg. expression score for this sample: '51.2274'
Avg. expression score in LCM sample: '28.6609'
Tissue used: 'pure endosperm, no chalazal'
AT3G61220 SDR1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.2666 x 10-2 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61220 SDR1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61220 SDR1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61220 SDR1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.2381 x 10-1 3 0 1 1 100.00% 50.00% 3 2 TAIR8 Avg. embryo expression (dissected): '32.0338'
Avg. embryo expression (LCM): '11.1395'
AT3G61210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G61210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G61210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G61210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.9289 x 10-2 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 7 4 63.64% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '60.8275'
Avg. embryo expression (LCM): '38.6176'
AT3G61200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 0 4 50.00% 100.00% 2 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '394.322'
Avg. expression score in LCM sample: '121.831'
Tissue used: 'full endosperm'
AT3G61200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 2 0 0 50.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '365.906'
Avg. expression score in LCM sample: '121.831'
Tissue used: 'pure endosperm, no chalazal'
AT3G61198 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.413571'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G61198 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.29004'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G61198 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61198 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61198 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 2 0 0.00% 0 2 TAIR8 Avg. embryo expression (dissected): '9.01715'
Avg. embryo expression (LCM): '16.2006'
AT3G61198 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61190 BAP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61190 BAP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '184.151'
Avg. embryo expression (LCM): '2.72521'
AT3G61190 BAP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.4339 x 10-2 11 9 2 38 55.00% 95.00% 20 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.065218'
Avg. expression score for this sample: '419.256'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G61190 BAP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 3 100.00% 100.00% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.065218'
Avg. expression score for this sample: '253.383'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G61190 BAP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61190 BAP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.85904 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61182 LCR54 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61182 LCR54 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61182 LCR54 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.45455 x 10-1 5 0 1 0 100.00% 0.00% 5 1 TAIR8 Avg. embryo expression (dissected): '9.5897'
Avg. embryo expression (LCM): '0'
AT3G61182 LCR54 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61182 LCR54 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.11971'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G61182 LCR54 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 0 0 1 100.00% 100.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.10005'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G61180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.1846 x 10-2 53 6 19 43 89.83% 69.35% 59 62 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.136052'
Avg. expression score for this sample: '96.7679'
Avg. expression score in LCM sample: '75.0329'
Tissue used: 'full endosperm'
AT3G61180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 21 4 18 19 84.00% 51.35% 25 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.136052'
Avg. expression score for this sample: '119.046'
Avg. expression score in LCM sample: '75.0329'
Tissue used: 'pure endosperm, no chalazal'
AT3G61180 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.33189 x 10-1 9 2 81.82% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61180 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.0 x 10-5 47 1 97.92% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61180 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.62396 x 10-1 32 16 66.67% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61180 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.58648 x 10-1 20 11 2 0 64.52% 0.00% 31 2 TAIR8 Avg. embryo expression (dissected): '71.1368'
Avg. embryo expression (LCM): '49.4306'
AT3G61177 LCR53 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G61177 LCR53 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.11111 x 10-1 16 0 100.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61177 LCR53 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '12.6613'
Avg. expression score in LCM sample: '6.49648'
Tissue used: 'pure endosperm, no chalazal'
AT3G61177 LCR53 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 1 50.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.87407'
Avg. expression score in LCM sample: '6.49648'
Tissue used: 'full endosperm'
AT3G61177 LCR53 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 11 12 47.83% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61177 LCR53 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61175 LCR52 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61175 LCR52 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61175 LCR52 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.33333 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61175 LCR52 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G61175 LCR52 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.48392'
Avg. expression score in LCM sample: '12.6696'
Tissue used: 'full endosperm'
AT3G61175 LCR52 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '26.8782'
Avg. expression score in LCM sample: '12.6696'
Tissue used: 'pure endosperm, no chalazal'
AT3G61172 LCR8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G61172 LCR8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.749455'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G61172 LCR8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.4 12 7 63.16% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61172 LCR8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61172 LCR8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G61172 LCR8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.82353 x 10-1 21 12 63.64% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61170 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.29231 x 10-1 14 9 60.87% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61170 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 1 0 1 50.00% 100.00% 2 1 TAIR8 Avg. embryo expression (dissected): '13.7222'
Avg. embryo expression (LCM): '19.2523'
AT3G61170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.49347'
Avg. expression score in LCM sample: '5.6293'
Tissue used: 'full endosperm'
AT3G61170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.95948'
Avg. expression score in LCM sample: '5.6293'
Tissue used: 'pure endosperm, no chalazal'
AT3G61170 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61170 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.722114'
Avg. embryo expression (LCM): '0'
AT3G61160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.85714 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 1 2 100.00% 66.67% 2 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.52057'
Avg. expression score in LCM sample: '6.40829'
Tissue used: 'pure endosperm, no chalazal'
AT3G61160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 1 1 100.00% 50.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.59458'
Avg. expression score in LCM sample: '6.40829'
Tissue used: 'full endosperm'
AT3G61150 HDG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.30265 x 10-1 8 3 7 3 72.73% 30.00% 11 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.560744'
Avg. expression score for this sample: '119.191'
Avg. expression score in LCM sample: '52.5157'
Tissue used: 'full endosperm'
AT3G61150 HDG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 0 1 66.67% 100.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.560744'
Avg. expression score for this sample: '121.243'
Avg. expression score in LCM sample: '52.5157'
Tissue used: 'pure endosperm, no chalazal'
AT3G61150 HDG1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61150 HDG1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61150 HDG1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.22079 x 10-1 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61150 HDG1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 2 0 100.00% 0.00% 1 2 TAIR8 Avg. embryo expression (dissected): '222.69'
Avg. embryo expression (LCM): '159.481'
AT3G61140 FUS6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.71217 x 10-1 32 16 10 4 66.67% 28.57% 48 14 TAIR8 Avg. embryo expression (dissected): '252.673'
Avg. embryo expression (LCM): '319.729'
AT3G61140 FUS6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3 x 10-9 118 142 45.38% 260 TAIR8 Mutant effect: 'N/A (not a MEG)'