Displaying data sets 65801 - 65900 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G62097 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G62097 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G62090 PIL2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '71.0052'
Avg. embryo expression (LCM): '22.505'
AT3G62090 PIL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '22.1891'
Avg. expression score in LCM sample: '12.2875'
Tissue used: 'pure endosperm, no chalazal'
AT3G62090 PIL2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62090 PIL2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62090 PIL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '41.2577'
Avg. expression score in LCM sample: '12.2875'
Tissue used: 'full endosperm'
AT3G62090 PIL2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62080 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '71.9119'
Avg. expression score in LCM sample: '44.1525'
Tissue used: 'pure endosperm, no chalazal'
AT3G62080 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '72.6103'
Avg. embryo expression (LCM): '42.0838'
AT3G62080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '52.5871'
Avg. expression score in LCM sample: '44.1525'
Tissue used: 'full endosperm'
AT3G62080 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62080 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62070 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.5 x 10-7 46 1 97.87% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62070 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.51563 x 10-1 59 25 70.24% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62070 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 452 0 100.00% 452 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.98577 x 10-1 183 87 101 178 67.78% 63.80% 270 279 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '161.412'
Avg. expression score in LCM sample: '59.3355'
Tissue used: 'full endosperm'
AT3G62070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.34119 x 10-1 250 130 140 304 65.79% 68.47% 380 444 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '260.388'
Avg. expression score in LCM sample: '59.3355'
Tissue used: 'pure endosperm, no chalazal'
AT3G62070 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.59051 x 10-1 27 37 8 13 42.19% 61.90% 64 21 TAIR8 Avg. embryo expression (dissected): '43.5846'
Avg. embryo expression (LCM): '16.5773'
AT3G62060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.93756 x 10-1 51 43 13 10 54.26% 43.48% 94 23 TAIR8 Avg. embryo expression (dissected): '63.917'
Avg. embryo expression (LCM): '46.3411'
AT3G62060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 10 8 8 20 55.56% 71.43% 18 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '11.2262'
Avg. expression score in LCM sample: '21.6941'
Tissue used: 'full endosperm'
AT3G62060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.78716 x 10-1 14 7 1 8 66.67% 88.89% 21 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '12.6811'
Avg. expression score in LCM sample: '21.6941'
Tissue used: 'pure endosperm, no chalazal'
AT3G62060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.48351 x 10-1 9 3 75.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 27 13 67.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.2063 x 10-2 9 12 42.86% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62050 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.69231 x 10-1 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '26.66'
Avg. expression score in LCM sample: '7.24607'
Tissue used: 'pure endosperm, no chalazal'
AT3G62050 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '66.1672'
Avg. embryo expression (LCM): '63.9232'
AT3G62050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 1 1 2 75.00% 66.67% 4 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '20.0259'
Avg. expression score in LCM sample: '7.24607'
Tissue used: 'full endosperm'
AT3G62050 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62050 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62040 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62040 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62040 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '117.898'
Avg. expression score in LCM sample: '6.83453'
Tissue used: 'full endosperm'
AT3G62040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '16.4936'
Avg. expression score in LCM sample: '6.83453'
Tissue used: 'pure endosperm, no chalazal'
AT3G62040 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '33.9617'
Avg. embryo expression (LCM): '27.7168'
AT3G62030 ROC4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2154.58'
Avg. embryo expression (LCM): '1955.4'
AT3G62030 ROC4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '444.42'
Avg. expression score in LCM sample: '154.71'
Tissue used: 'full endosperm'
AT3G62030 ROC4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '483.607'
Avg. expression score in LCM sample: '154.71'
Tissue used: 'pure endosperm, no chalazal'
AT3G62030 ROC4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62030 ROC4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62030 ROC4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62020 GLP10 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62020 GLP10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G62020 GLP10 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.05957'
Avg. embryo expression (LCM): '0'
AT3G62020 GLP10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.23671'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G62020 GLP10 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62020 GLP10 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62010 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.48727 x 10-1 27 6 81.82% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62010 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.23003 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62010 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.38189 x 10-1 15 0 100.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.849 x 10-3 10 6 1 47 62.50% 97.92% 16 48 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002818'
Avg. expression score for this sample: '420.64'
Avg. expression score in LCM sample: '106.545'
Tissue used: 'full endosperm'
AT3G62010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002818'
Avg. expression score for this sample: '179.036'
Avg. expression score in LCM sample: '106.545'
Tissue used: 'pure endosperm, no chalazal'
AT3G62010 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 0 1 0 100.00% 0.00% 2 1 TAIR8 Avg. embryo expression (dissected): '229.683'
Avg. embryo expression (LCM): '124.732'
AT3G62000 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.37186 x 10-1 5 3 0 1 62.50% 100.00% 8 1 TAIR8 Avg. embryo expression (dissected): '28.2228'
Avg. embryo expression (LCM): '28.621'
AT3G62000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.54545 x 10-1 3 0 0 3 100.00% 100.00% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.102941'
Avg. expression score for this sample: '13.0476'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G62000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.102941'
Avg. expression score for this sample: '13.4128'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G62000 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62000 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G62000 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61990 OMTF3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.974 x 10-3 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61990 OMTF3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.29569 x 10-1 9 11 3 7 45.00% 70.00% 20 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.418957'
Avg. expression score for this sample: '14.0359'
Avg. expression score in LCM sample: '13.331'
Tissue used: 'pure endosperm, no chalazal'
AT3G61990 OMTF3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.51186 x 10-1 6 12 0 2 33.33% 100.00% 18 2 TAIR8 Avg. embryo expression (dissected): '12.7772'
Avg. embryo expression (LCM): '7.2463'
AT3G61990 OMTF3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 14 8 10 18 63.64% 64.29% 22 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.418957'
Avg. expression score for this sample: '13.969'
Avg. expression score in LCM sample: '13.331'
Tissue used: 'full endosperm'
AT3G61990 OMTF3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.90941 x 10-1 23 8 74.19% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61990 OMTF3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61980 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.0436 x 10-1 65 24 73.03% 89 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61980 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.3 x 10-10 83 0 100.00% 83 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61980 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-11 176 8 95.65% 184 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.0 x 10-5 237 58 89 258 80.34% 74.35% 295 347 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000033'
Avg. expression score for this sample: '316.076'
Avg. expression score in LCM sample: '11.8465'
Tissue used: 'full endosperm'
AT3G61980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.57383 x 10-1 79 30 32 81 72.48% 71.68% 109 113 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000033'
Avg. expression score for this sample: '198.593'
Avg. expression score in LCM sample: '11.8465'
Tissue used: 'pure endosperm, no chalazal'
AT3G61980 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.6835 x 10-2 27 9 1 2 75.00% 66.67% 36 3 TAIR8 Avg. embryo expression (dissected): '63.2059'
Avg. embryo expression (LCM): '35.4529'
AT3G61970 NGA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.44128 x 10-1 61 79 40 33 43.57% 45.21% 140 73 TAIR8 Avg. embryo expression (dissected): '100.841'
Avg. embryo expression (LCM): '96.8141'
AT3G61970 NGA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.26 x 10-4 13 3 1 50 81.25% 98.04% 16 51 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00632'
Avg. expression score for this sample: '19.7637'
Avg. expression score in LCM sample: '2.1165'
Tissue used: 'full endosperm'
AT3G61970 NGA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.24204 x 10-1 9 19 3 43 32.14% 93.48% 28 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00632'
Avg. expression score for this sample: '20.6914'
Avg. expression score in LCM sample: '2.1165'
Tissue used: 'pure endosperm, no chalazal'
AT3G61970 NGA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.4758 x 10-2 58 3 95.08% 61 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61970 NGA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.07 x 10-4 53 0 100.00% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61970 NGA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5617 x 10-2 24 0 100.00% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61962 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61962 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61962 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G61962 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G61962 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.44742'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G61962 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61960 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.108 x 10-2 65 26 71.43% 91 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61960 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.9 x 10-13 329 17 95.09% 346 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61960 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 678 17 97.55% 695 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.0 x 10-12 279 63 93 405 81.58% 81.33% 342 498 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.3e-11'
Avg. expression score for this sample: '175.164'
Avg. expression score in LCM sample: '40.5956'
Tissue used: 'full endosperm'
AT3G61960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.60374 x 10-1 69 23 28 50 75.00% 64.10% 92 78 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.3e-11'
Avg. expression score for this sample: '61.0116'
Avg. expression score in LCM sample: '40.5956'
Tissue used: 'pure endosperm, no chalazal'
AT3G61960 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.60452 x 10-1 36 28 12 14 56.25% 53.85% 64 26 TAIR8 Avg. embryo expression (dissected): '48.5126'
Avg. embryo expression (LCM): '48.564'
AT3G61950 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.49887 x 10-1 11 5 2 3 68.75% 60.00% 16 5 TAIR8 Avg. embryo expression (dissected): '23.358'
Avg. embryo expression (LCM): '42.2722'
AT3G61950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.79089'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G61950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 0 0 66.67% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.34142'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G61950 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61950 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61950 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61947 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G61947 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'