Displaying data sets 65101 - 65200 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT3G63140 CSP41A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.54545 x 10-1 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63140 CSP41A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 2 3 1 50.00% 25.00% 4 4 TAIR8 Avg. embryo expression (dissected): '32.0467'
Avg. embryo expression (LCM): '22.6306'
AT3G63140 CSP41A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 0 0 100.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454545'
Avg. expression score for this sample: '9.80726'
Avg. expression score in LCM sample: '5.10018'
Tissue used: 'pure endosperm, no chalazal'
AT3G63140 CSP41A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454545'
Avg. expression score for this sample: '13.1015'
Avg. expression score in LCM sample: '5.10018'
Tissue used: 'full endosperm'
AT3G63140 CSP41A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63140 CSP41A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.81818 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63130 RANGAP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 48 15 76.19% 63 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63130 RANGAP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 10 3 76.92% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63130 RANGAP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 23 13 5 12 63.89% 70.59% 36 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.201796'
Avg. expression score for this sample: '181.906'
Avg. expression score in LCM sample: '82.9403'
Tissue used: 'pure endosperm, no chalazal'
AT3G63130 RANGAP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.81505 x 10-1 43 37 12 12 53.75% 50.00% 80 24 TAIR8 Avg. embryo expression (dissected): '402.29'
Avg. embryo expression (LCM): '480.654'
AT3G63130 RANGAP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.97979 x 10-1 34 13 72.34% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63130 RANGAP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.8936 x 10-2 14 8 4 42 63.64% 91.30% 22 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.201796'
Avg. expression score for this sample: '142.652'
Avg. expression score in LCM sample: '82.9403'
Tissue used: 'full endosperm'
AT3G63120 CYCP1;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.4588 x 10-2 67 29 12 66 69.79% 84.62% 96 78 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004512'
Avg. expression score for this sample: '265.527'
Avg. expression score in LCM sample: '130.032'
Tissue used: 'full endosperm'
AT3G63120 CYCP1;1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.5 x 10-6 71 1 98.61% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63120 CYCP1;1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7 x 10-14 194 2 98.98% 196 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63120 CYCP1;1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.6 x 10-6 90 3 96.77% 93 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63120 CYCP1;1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.00007 x 10-1 54 92 7 14 36.99% 66.67% 146 21 TAIR8 Avg. embryo expression (dissected): '437.893'
Avg. embryo expression (LCM): '444.423'
AT3G63120 CYCP1;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.4609 x 10-2 48 23 8 63 67.61% 88.73% 71 71 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004512'
Avg. expression score for this sample: '351.034'
Avg. expression score in LCM sample: '130.032'
Tissue used: 'pure endosperm, no chalazal'
AT3G63110 IPT3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G63110 IPT3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G63110 IPT3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63110 IPT3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.494339'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G63110 IPT3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63110 IPT3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63095 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63095 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63095 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63095 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.36595'
Avg. embryo expression (LCM): '0'
AT3G63095 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.73325'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G63095 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.53645'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G63090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.30238 x 10-1 16 6 12 13 72.73% 52.00% 22 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.283446'
Avg. expression score for this sample: '92.1761'
Avg. expression score in LCM sample: '32.9527'
Tissue used: 'full endosperm'
AT3G63090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.883 x 10-3 45 12 78.95% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.91355 x 10-1 8 4 7 0 66.67% 0.00% 12 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.283446'
Avg. expression score for this sample: '56.6234'
Avg. expression score in LCM sample: '32.9527'
Tissue used: 'pure endosperm, no chalazal'
AT3G63090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.61215 x 10-1 10 7 2 4 58.82% 66.67% 17 6 TAIR8 Avg. embryo expression (dissected): '112.336'
Avg. embryo expression (LCM): '106.195'
AT3G63090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.60743 x 10-1 51 23 68.92% 74 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63088 RTFL14 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63088 RTFL14 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT3G63088 RTFL14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G63088 RTFL14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G63088 RTFL14 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63088 RTFL14 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63080 GPX5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.4 x 10-5 74 3 96.10% 77 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63080 GPX5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.72908 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63080 GPX5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.97226 x 10-1 13 5 5 12 72.22% 70.59% 18 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.138833'
Avg. expression score for this sample: '115.419'
Avg. expression score in LCM sample: '13.0517'
Tissue used: 'pure endosperm, no chalazal'
AT3G63080 GPX5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.00323 x 10-1 8 2 1 0 80.00% 0.00% 10 1 TAIR8 Avg. embryo expression (dissected): '83.4137'
Avg. embryo expression (LCM): '86.9933'
AT3G63080 GPX5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.21184 x 10-1 26 16 61.90% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63080 GPX5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.59833 x 10-1 76 2 28 18 97.44% 39.13% 78 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.138833'
Avg. expression score for this sample: '156.636'
Avg. expression score in LCM sample: '13.0517'
Tissue used: 'full endosperm'
AT3G63070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.238 x 10-3 63 11 32 107 85.14% 76.98% 74 139 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004814'
Avg. expression score for this sample: '134.74'
Avg. expression score in LCM sample: '110.455'
Tissue used: 'full endosperm'
AT3G63070 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.00418 x 10-1 25 5 83.33% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63070 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.64 x 10-4 225 29 88.58% 254 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63070 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.30466 x 10-1 109 29 78.99% 138 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63070 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.58322 x 10-1 14 25 10 8 35.90% 44.44% 39 18 TAIR8 Avg. embryo expression (dissected): '119.533'
Avg. embryo expression (LCM): '112.563'
AT3G63070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.95032 x 10-1 50 19 17 39 72.46% 69.64% 69 56 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004814'
Avg. expression score for this sample: '144.417'
Avg. expression score in LCM sample: '110.455'
Tissue used: 'pure endosperm, no chalazal'
AT3G63060 EDL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '95.1527'
Avg. expression score in LCM sample: '17.3876'
Tissue used: 'pure endosperm, no chalazal'
AT3G63060 EDL3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '12.642'
Avg. embryo expression (LCM): '2.1224'
AT3G63060 EDL3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63060 EDL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '33.4265'
Avg. expression score in LCM sample: '17.3876'
Tissue used: 'full endosperm'
AT3G63060 EDL3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.33333 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63060 EDL3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63052 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.32815 x 10-1 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63052 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63052 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63052 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 1 6 1 87.50% 14.29% 8 7 TAIR8 Avg. embryo expression (dissected): '93.5745'
Avg. embryo expression (LCM): '232.334'
AT3G63052 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 3 0 1 50.00% 100.00% 6 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.731094'
Avg. expression score for this sample: '36.1025'
Avg. expression score in LCM sample: '249.865'
Tissue used: 'pure endosperm, no chalazal'
AT3G63052 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.4472 x 10-1 10 1 1 1 90.91% 50.00% 11 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.731094'
Avg. expression score for this sample: '62.6425'
Avg. expression score in LCM sample: '249.865'
Tissue used: 'full endosperm'
AT3G63050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.13444'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT3G63050 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63050 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.03799'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT3G63050 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.49485'
Avg. embryo expression (LCM): '0'
AT3G63050 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63040 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.59117 x 10-1 44 29 60.27% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63040 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.84155 x 10-1 316 289 120 131 52.23% 52.19% 605 251 TAIR8 Avg. embryo expression (dissected): '7239.08'
Avg. embryo expression (LCM): '148.091'
AT3G63040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.5784 x 10-1 238 132 135 301 64.32% 69.04% 370 436 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.066734'
Avg. expression score for this sample: '3638.38'
Avg. expression score in LCM sample: '36.0099'
Tissue used: 'pure endosperm, no chalazal'
AT3G63040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.761 x 10-2 1062 642 617 1205 62.32% 66.14% 1704 1822 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.066734'
Avg. expression score for this sample: '7496.02'
Avg. expression score in LCM sample: '36.0099'
Tissue used: 'full endosperm'
AT3G63040 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.93519 x 10-1 222 113 66.27% 335 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63040 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4 x 10-11 65 104 38.46% 169 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63030 MBD4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63030 MBD4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63030 MBD4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '198.181'
Avg. expression score in LCM sample: '77.0612'
Tissue used: 'pure endosperm, no chalazal'
AT3G63030 MBD4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '361.131'
Avg. embryo expression (LCM): '348.488'
AT3G63030 MBD4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63030 MBD4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '291.08'
Avg. expression score in LCM sample: '77.0612'
Tissue used: 'full endosperm'
AT3G63020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.56214'
Avg. expression score in LCM sample: '4.79152'
Tissue used: 'full endosperm'
AT3G63020 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63020 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63020 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63020 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.89134'
Avg. embryo expression (LCM): '2.04705'
AT3G63020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.86657'
Avg. expression score in LCM sample: '4.79152'
Tissue used: 'pure endosperm, no chalazal'
AT3G63010 GID1B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 1 0 100.00% 0.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.582043'
Avg. expression score for this sample: '4.02187'
Avg. expression score in LCM sample: '.793687'
Tissue used: 'pure endosperm, no chalazal'
AT3G63010 GID1B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.61215 x 10-1 5 11 3 4 31.25% 57.14% 16 7 TAIR8 Avg. embryo expression (dissected): '44.0272'
Avg. embryo expression (LCM): '42.6489'
AT3G63010 GID1B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.8853 x 10-2 9 7 56.25% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63010 GID1B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.54545 x 10-1 0 0 0 6 100.00% 0 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.582043'
Avg. expression score for this sample: '4.78171'
Avg. expression score in LCM sample: '.793687'
Tissue used: 'full endosperm'
AT3G63010 GID1B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.6861 x 10-2 21 17 55.26% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63010 GID1B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.5454 x 10-2 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63006 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63006 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63006 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT3G63006 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'