Displaying data sets 64601 - 64700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G00305 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '31.3195'
Avg. expression score in LCM sample: '11.5967'
Tissue used: 'pure endosperm, no chalazal'
AT4G00305 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.52801'
Avg. embryo expression (LCM): '0'
AT4G00300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 5 1 1 0 83.33% 0.00% 6 1 TAIR8 Avg. embryo expression (dissected): '250.106'
Avg. embryo expression (LCM): '75.0626'
AT4G00300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.44861 x 10-1 120 85 58.54% 205 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3868 x 10-2 47 6 88.68% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 2 1 1 50.00% 50.00% 4 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.851385'
Avg. expression score for this sample: '225.382'
Avg. expression score in LCM sample: '319.797'
Tissue used: 'pure endosperm, no chalazal'
AT4G00300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.4806 x 10-2 3 8 27.27% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.91787 x 10-1 31 7 10 11 81.58% 52.38% 38 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.851385'
Avg. expression score for this sample: '498.462'
Avg. expression score in LCM sample: '319.797'
Tissue used: 'full endosperm'
AT4G00290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.34478 x 10-1 12 4 10 5 75.00% 33.33% 16 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '62.8398'
Avg. expression score in LCM sample: '67.4634'
Tissue used: 'pure endosperm, no chalazal'
AT4G00290 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.38446 x 10-1 55 20 73.33% 75 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00290 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.35052 x 10-1 12 3 0 0 80.00% 15 0 TAIR8 Avg. embryo expression (dissected): '72.0707'
Avg. embryo expression (LCM): '65.7818'
AT4G00290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.61247 x 10-1 36 11 21 42 76.60% 66.67% 47 63 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '69.2066'
Avg. expression score in LCM sample: '67.4634'
Tissue used: 'full endosperm'
AT4G00290 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.1 x 10-5 83 9 90.22% 92 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00290 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.81917 x 10-1 5 4 55.56% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G00280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G00280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G00270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.4025 x 10-1 408 219 317 656 65.07% 67.42% 627 973 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.89094'
Avg. expression score for this sample: '7418.08'
Avg. expression score in LCM sample: '772.714'
Tissue used: 'full endosperm'
AT4G00270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.32443 x 10-1 102 43 63 103 70.34% 62.05% 145 166 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.89094'
Avg. expression score for this sample: '10332'
Avg. expression score in LCM sample: '772.714'
Tissue used: 'pure endosperm, no chalazal'
AT4G00270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.1 x 10-14 416 84 83.20% 500 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.96261 x 10-1 107 96 35 32 52.71% 47.76% 203 67 TAIR8 Avg. embryo expression (dissected): '11532'
Avg. embryo expression (LCM): '2651.25'
AT4G00270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.5 x 10-7 368 103 78.13% 471 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.84043 x 10-1 100 45 68.97% 145 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00260 MEE45 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.6068 x 10-2 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00260 MEE45 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00260 MEE45 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00260 MEE45 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.5017 x 10-1 9 4 11 9 69.23% 45.00% 13 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.321587'
Avg. expression score for this sample: '20.7334'
Avg. expression score in LCM sample: '7.43715'
Tissue used: 'full endosperm'
AT4G00260 MEE45 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.321587'
Avg. expression score for this sample: '13.0607'
Avg. expression score in LCM sample: '7.43715'
Tissue used: 'pure endosperm, no chalazal'
AT4G00260 MEE45 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 6 0 3 40.00% 100.00% 10 3 TAIR8 Avg. embryo expression (dissected): '44.722'
Avg. embryo expression (LCM): '25.4311'
AT4G00250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 x 10-15 216 1 43 0 99.54% 0.00% 217 43 TAIR8 Avg. embryo expression (dissected): '166.081'
Avg. embryo expression (LCM): '111.545'
AT4G00250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.4 x 10-7 150 2 172 1 98.68% 0.58% 152 173 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.0e-08'
Avg. expression score for this sample: '86.7919'
Avg. expression score in LCM sample: '10.4943'
Tissue used: 'full endosperm'
AT4G00250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.8 x 10-20 0 78 0.00% 78 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-13 44 0 100.00% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.7306 x 10-2 59 1 52 1 98.33% 1.89% 60 53 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.0e-08'
Avg. expression score for this sample: '45.0596'
Avg. expression score in LCM sample: '10.4943'
Tissue used: 'pure endosperm, no chalazal'
AT4G00250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.49691 x 10-1 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00240 PLDBETA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00240 PLDBETA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.92217 x 10-1 25 5 6 18 83.33% 75.00% 30 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.19255'
Avg. expression score for this sample: '40.0817'
Avg. expression score in LCM sample: '39.214'
Tissue used: 'pure endosperm, no chalazal'
AT4G00240 PLDBETA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.5 x 10-7 58 78 42.65% 136 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00240 PLDBETA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.45455 x 10-1 4 1 0 1 80.00% 100.00% 5 1 TAIR8 Avg. embryo expression (dissected): '11.5233'
Avg. embryo expression (LCM): '9.50684'
AT4G00240 PLDBETA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.05438 x 10-1 21 8 3 6 72.41% 66.67% 29 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.19255'
Avg. expression score for this sample: '27.9131'
Avg. expression score in LCM sample: '39.214'
Tissue used: 'full endosperm'
AT4G00240 PLDBETA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.853 x 10-2 57 7 89.06% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00238 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00238 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '936.173'
Avg. embryo expression (LCM): '758.563'
AT4G00238 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '559.886'
Avg. expression score in LCM sample: '154.99'
Tissue used: 'pure endosperm, no chalazal'
AT4G00238 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00238 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '827.196'
Avg. expression score in LCM sample: '154.99'
Tissue used: 'full endosperm'
AT4G00238 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00234 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00234 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '27.0189'
Avg. expression score in LCM sample: '16.7409'
Tissue used: 'full endosperm'
AT4G00234 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '21.2786'
Avg. expression score in LCM sample: '16.7409'
Tissue used: 'pure endosperm, no chalazal'
AT4G00234 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00234 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '22.5587'
Avg. embryo expression (LCM): '27.0261'
AT4G00234 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00232 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00232 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00232 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.389931'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G00232 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G00232 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G00232 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00231 MEE50 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.1235 x 10-2 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00231 MEE50 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 1 1 0 50.00% 0.00% 2 1 TAIR8 Avg. embryo expression (dissected): '44.0937'
Avg. embryo expression (LCM): '68.5824'
AT4G00231 MEE50 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.84973 x 10-1 9 4 4 15 69.23% 78.95% 13 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.589585'
Avg. expression score for this sample: '65.9061'
Avg. expression score in LCM sample: '54.3382'
Tissue used: 'full endosperm'
AT4G00231 MEE50 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 43 12 78.18% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00231 MEE50 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.25848 x 10-1 22 4 84.62% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00231 MEE50 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.589585'
Avg. expression score for this sample: '51.7577'
Avg. expression score in LCM sample: '54.3382'
Tissue used: 'pure endosperm, no chalazal'
AT4G00230 XSP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.87368 x 10-1 21 3 5 4 87.50% 44.44% 24 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.284368'
Avg. expression score for this sample: '25.2469'
Avg. expression score in LCM sample: '13.3898'
Tissue used: 'pure endosperm, no chalazal'
AT4G00230 XSP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.6134 x 10-2 2 4 33.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00230 XSP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.89188 x 10-1 12 7 8 11 63.16% 57.89% 19 19 TAIR8 Avg. embryo expression (dissected): '32.9908'
Avg. embryo expression (LCM): '22.8692'
AT4G00230 XSP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.87607 x 10-1 9 1 3 9 90.00% 75.00% 10 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.284368'
Avg. expression score for this sample: '22.9219'
Avg. expression score in LCM sample: '13.3898'
Tissue used: 'full endosperm'
AT4G00230 XSP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.63057 x 10-1 15 5 75.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00230 XSP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.85095 x 10-1 7 3 70.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00220 JLO endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 x 10-30 116 45 72.05% 161 TAIR8 Mutant effect: 'MEG affected by met1'
AT4G00220 JLO endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.78736 x 10-1 36 1 97.30% 37 TAIR8 Mutant effect: 'MEG affected by met1'
AT4G00220 JLO embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.43 x 10-4 15 0 1 12 100.00% 92.31% 15 13 TAIR8 Avg. embryo expression (dissected): '32.6809'
Avg. embryo expression (LCM): '1.33121'
AT4G00220 JLO endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 0.0 349 4 7 627 98.87% 98.90% 353 634 TAIR8 Validated by Sanger sequencing: '+'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '642.951'
Avg. expression score in LCM sample: '186.443'
Tissue used: 'pure endosperm, no chalazal'
AT4G00220 JLO endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.34243 x 10-1 22 1 95.65% 23 TAIR8 Mutant effect: 'MEG affected by met1'
AT4G00220 JLO endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 0.0 317 7 8 209 97.84% 96.31% 324 217 TAIR8 Validated by Sanger sequencing: '+'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '313.776'
Avg. expression score in LCM sample: '186.443'
Tissue used: 'full endosperm'
AT4G00210 LBD31 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '14.0298'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G00210 LBD31 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '11.1773'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G00210 LBD31 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00210 LBD31 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '9.04597'
Avg. embryo expression (LCM): '3.89316'
AT4G00210 LBD31 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00210 LBD31 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.02016 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.18909 x 10-1 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 8 3 5 5 72.73% 50.00% 11 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.59591'
Avg. expression score for this sample: '16.2559'
Avg. expression score in LCM sample: '8.36311'
Tissue used: 'full endosperm'
AT4G00200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.37186 x 10-1 4 0 5 0 100.00% 0.00% 4 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.59591'
Avg. expression score for this sample: '20.3597'
Avg. expression score in LCM sample: '8.36311'
Tissue used: 'pure endosperm, no chalazal'
AT4G00200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.40071 x 10-1 10 2 2 0 83.33% 0.00% 12 2 TAIR8 Avg. embryo expression (dissected): '63.7125'
Avg. embryo expression (LCM): '31.2457'
AT4G00190 PME38 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G00190 PME38 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.5447'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G00190 PME38 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.33333 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00190 PME38 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00190 PME38 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.08192'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G00190 PME38 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00180 YAB3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0989 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00180 YAB3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.2381 x 10-1 0 2 2 1 0.00% 33.33% 2 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.099533'
Avg. expression score for this sample: '62.8865'
Avg. expression score in LCM sample: '1.16114'
Tissue used: 'pure endosperm, no chalazal'