Displaying data sets 64501 - 64600 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G00420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 6 1 1 45.45% 50.00% 11 2 TAIR8 Avg. embryo expression (dissected): '45.108'
Avg. embryo expression (LCM): '71.0439'
AT4G00420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1845 x 10-2 22 1 95.65% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 4 3 14 42.86% 82.35% 7 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.730316'
Avg. expression score for this sample: '38.4155'
Avg. expression score in LCM sample: '23.9576'
Tissue used: 'pure endosperm, no chalazal'
AT4G00420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.736 x 10-3 21 0 100.00% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.36076 x 10-1 16 7 9 22 69.57% 70.97% 23 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.730316'
Avg. expression score for this sample: '42.422'
Avg. expression score in LCM sample: '23.9576'
Tissue used: 'full endosperm'
AT4G00416 MBD3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G00416 MBD3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00416 MBD3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00416 MBD3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G00416 MBD3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G00416 MBD3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00400 GPAT8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00400 GPAT8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.12428'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G00400 GPAT8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.41399'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G00400 GPAT8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00400 GPAT8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00400 GPAT8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.23594'
Avg. embryo expression (LCM): '3.3657'
AT4G00390 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 4 0 1 50.00% 100.00% 8 1 TAIR8 Avg. embryo expression (dissected): '5.35367'
Avg. embryo expression (LCM): '2.80056'
AT4G00390 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.498 x 10-3 150 41 78.53% 191 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.56985 x 10-1 35 11 7 13 76.09% 65.00% 46 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.3e-11'
Avg. expression score for this sample: '19.3379'
Avg. expression score in LCM sample: '5.45293'
Tissue used: 'pure endosperm, no chalazal'
AT4G00390 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.459 x 10-3 133 40 76.88% 173 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00390 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.4507 x 10-2 40 0 100.00% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.5 x 10-13 83 11 17 188 88.30% 91.71% 94 205 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.3e-11'
Avg. expression score for this sample: '76.3421'
Avg. expression score in LCM sample: '5.45293'
Tissue used: 'full endosperm'
AT4G00380 FDM2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.31 x 10-4 5285 1209 3112 2557 81.38% 45.10% 6494 5669 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001093'
Avg. expression score for this sample: '2950.08'
Avg. expression score in LCM sample: '275.204'
Tissue used: 'full endosperm'
AT4G00380 FDM2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2458 255 90.60% 2713 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00380 FDM2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.2 x 10-8 458 147 75.70% 605 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00380 FDM2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.5 x 10-19 2514 909 1150 448 73.44% 28.04% 3423 1598 TAIR8 Avg. embryo expression (dissected): '3137.5'
Avg. embryo expression (LCM): '1562.43'
AT4G00380 FDM2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.41499 x 10-1 1684 386 821 703 81.35% 46.13% 2070 1524 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001093'
Avg. expression score for this sample: '1592.1'
Avg. expression score in LCM sample: '275.204'
Tissue used: 'pure endosperm, no chalazal'
AT4G00380 FDM2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.3 x 10-13 414 380 52.14% 794 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00370 ANTR2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.24281 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00370 ANTR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.07547 x 10-1 8 5 2 18 61.54% 90.00% 13 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.675188'
Avg. expression score for this sample: '156.993'
Avg. expression score in LCM sample: '248.674'
Tissue used: 'full endosperm'
AT4G00370 ANTR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 2 6 9 60.00% 60.00% 5 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.675188'
Avg. expression score for this sample: '223.861'
Avg. expression score in LCM sample: '248.674'
Tissue used: 'pure endosperm, no chalazal'
AT4G00370 ANTR2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.5528 x 10-2 1 4 20.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00370 ANTR2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.68094 x 10-1 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00370 ANTR2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 6 7 4 5 46.15% 55.56% 13 9 TAIR8 Avg. embryo expression (dissected): '439.154'
Avg. embryo expression (LCM): '327.025'
AT4G00360 CYP86A2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.19292 x 10-1 27 13 15 7 67.50% 31.82% 40 22 TAIR8 Avg. embryo expression (dissected): '88.2934'
Avg. embryo expression (LCM): '26.4609'
AT4G00360 CYP86A2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.5353 x 10-1 94 1 98.95% 95 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00360 CYP86A2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.4 x 10-12 83 1 0 28 98.81% 100.00% 84 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.2e-20'
Avg. expression score for this sample: '96.2919'
Avg. expression score in LCM sample: '32.3795'
Tissue used: 'pure endosperm, no chalazal'
AT4G00360 CYP86A2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.1121 x 10-2 398 5 98.76% 403 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00360 CYP86A2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.05285 x 10-1 48 3 94.12% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00360 CYP86A2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.4 x 10-9 70 4 3 61 94.59% 95.31% 74 64 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.2e-20'
Avg. expression score for this sample: '119.842'
Avg. expression score in LCM sample: '32.3795'
Tissue used: 'full endosperm'
AT4G00355 ATI2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.4 x 10-7 94 35 24 191 72.87% 88.84% 129 215 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000064'
Avg. expression score for this sample: '311.109'
Avg. expression score in LCM sample: '171.069'
Tissue used: 'full endosperm'
AT4G00355 ATI2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.58163 x 10-1 228 61 78.89% 289 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00355 ATI2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2 x 10-4 332 45 88.06% 377 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00355 ATI2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 31 34 12 15 47.69% 55.56% 65 27 TAIR8 Avg. embryo expression (dissected): '151.33'
Avg. embryo expression (LCM): '161.089'
AT4G00355 ATI2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.1552 x 10-1 46 34 19 68 57.50% 78.16% 80 87 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000064'
Avg. expression score for this sample: '321.539'
Avg. expression score in LCM sample: '171.069'
Tissue used: 'pure endosperm, no chalazal'
AT4G00355 ATI2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 57 15 79.17% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.3422 x 10-2 6 6 2 36 50.00% 94.74% 12 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.114132'
Avg. expression score for this sample: '14.1224'
Avg. expression score in LCM sample: '15.3152'
Tissue used: 'full endosperm'
AT4G00350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.13426 x 10-1 10 14 6 39 41.67% 86.67% 24 45 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.114132'
Avg. expression score for this sample: '41.6222'
Avg. expression score in LCM sample: '15.3152'
Tissue used: 'pure endosperm, no chalazal'
AT4G00350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.46703 x 10-1 19 2 90.48% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-7 0 12 0.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.5767 x 10-2 0 26 4 8 0.00% 66.67% 26 12 TAIR8 Avg. embryo expression (dissected): '40.8333'
Avg. embryo expression (LCM): '7.57282'
AT4G00342 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.24381'
Avg. embryo expression (LCM): '0'
AT4G00342 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00342 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.88782'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G00342 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00342 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00342 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.05386'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G00340 RLK4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.21855 x 10-1 18 4 6 12 81.82% 66.67% 22 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.177543'
Avg. expression score for this sample: '50.7363'
Avg. expression score in LCM sample: '9.1568'
Tissue used: 'full endosperm'
AT4G00340 RLK4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.55801 x 10-1 22 1 95.65% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00340 RLK4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.72794 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00340 RLK4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.26195 x 10-1 3 4 6 0 42.86% 0.00% 7 6 TAIR8 Avg. embryo expression (dissected): '89.3253'
Avg. embryo expression (LCM): '32.2379'
AT4G00340 RLK4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.0226 x 10-2 6 0 0 5 100.00% 100.00% 6 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.177543'
Avg. expression score for this sample: '57.447'
Avg. expression score in LCM sample: '9.1568'
Tissue used: 'pure endosperm, no chalazal'
AT4G00340 RLK4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.7729 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00335 RHB1A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00335 RHB1A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.24503 x 10-1 4 0 2 11 100.00% 84.62% 4 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.205483'
Avg. expression score for this sample: '272.885'
Avg. expression score in LCM sample: '15.0507'
Tissue used: 'full endosperm'
AT4G00335 RHB1A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 2 0 3 50.00% 100.00% 4 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.205483'
Avg. expression score for this sample: '191.989'
Avg. expression score in LCM sample: '15.0507'
Tissue used: 'pure endosperm, no chalazal'
AT4G00335 RHB1A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2013 x 10-1 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00335 RHB1A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 11 2 84.62% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00335 RHB1A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '182.103'
Avg. embryo expression (LCM): '106.082'
AT4G00330 CRCK2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.31222 x 10-1 5 1 0 3 83.33% 100.00% 6 3 TAIR8 Avg. embryo expression (dissected): '8.40437'
Avg. embryo expression (LCM): '0'
AT4G00330 CRCK2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.8 x 10-6 279 12 95.88% 291 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00330 CRCK2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.08 x 10-4 66 27 0 67 70.97% 100.00% 93 67 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.0e-19'
Avg. expression score for this sample: '94.5928'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G00330 CRCK2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.92925 x 10-1 692 90 88.49% 782 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00330 CRCK2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.51495 x 10-1 89 8 91.75% 97 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00330 CRCK2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.0 x 10-17 203 58 20 321 77.78% 94.13% 261 341 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.0e-19'
Avg. expression score for this sample: '144.787'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G00320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 2 0 1 33.33% 100.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.35492'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G00320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 6 45.45% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G00320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.528'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G00320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.66667 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00315 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00315 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.126326'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G00315 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G00315 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00315 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00315 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.438883'
Avg. embryo expression (LCM): '0'
AT4G00310 EDA8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 55 46 21 12 54.46% 36.36% 101 33 TAIR8 Avg. embryo expression (dissected): '136.658'
Avg. embryo expression (LCM): '109.448'
AT4G00310 EDA8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.50907 x 10-1 63 25 71.59% 88 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00310 EDA8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.23229 x 10-1 28 11 14 34 71.79% 70.83% 39 48 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.939151'
Avg. expression score for this sample: '48.2503'
Avg. expression score in LCM sample: '8.68647'
Tissue used: 'pure endosperm, no chalazal'
AT4G00310 EDA8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.3 x 10-9 151 17 89.88% 168 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00310 EDA8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.73363 x 10-1 8 7 53.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00310 EDA8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.31229 x 10-1 86 28 74 113 75.44% 60.43% 114 187 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.939151'
Avg. expression score for this sample: '85.5822'
Avg. expression score in LCM sample: '8.68647'
Tissue used: 'full endosperm'
AT4G00305 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8.20713'
Avg. expression score in LCM sample: '11.5967'
Tissue used: 'full endosperm'
AT4G00305 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '31.3195'
Avg. expression score in LCM sample: '11.5967'
Tissue used: 'pure endosperm, no chalazal'
AT4G00305 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00305 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'