Displaying data sets 64401 - 64500 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G00585 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.017 x 10-3 68 8 89.47% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00585 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.80601 x 10-1 24 8 7 29 75.00% 80.56% 32 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.312029'
Avg. expression score for this sample: '70.7091'
Avg. expression score in LCM sample: '61.5402'
Tissue used: 'full endosperm'
AT4G00585 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.87952 x 10-1 70 32 68.63% 102 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00585 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.3254 x 10-2 40 22 8 19 64.52% 70.37% 62 27 TAIR8 Avg. embryo expression (dissected): '253.26'
Avg. embryo expression (LCM): '117.297'
AT4G00580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G00580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 1 4 0.00% 80.00% 1 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.63206'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G00580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.25275 x 10-1 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.54545 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G00570 NAD-ME2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 9.616 x 10-2 15 7 4 32 68.18% 88.89% 22 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.5e-07'
Avg. expression score for this sample: '51.3991'
Avg. expression score in LCM sample: '50.6637'
Tissue used: 'pure endosperm, no chalazal'
AT4G00570 NAD-ME2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.04769 x 10-1 15 1 93.75% 16 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT4G00570 NAD-ME2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.32151 x 10-1 500 104 82.78% 604 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT4G00570 NAD-ME2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 4.0 x 10-7 58 5 21 125 92.06% 85.62% 63 146 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.5e-07'
Avg. expression score for this sample: '77.7674'
Avg. expression score in LCM sample: '50.6637'
Tissue used: 'full endosperm'
AT4G00570 NAD-ME2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.59709 x 10-1 23 27 7 7 46.00% 50.00% 50 14 TAIR8 Avg. embryo expression (dissected): '47.4545'
Avg. embryo expression (LCM): '57.3425'
AT4G00570 NAD-ME2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.40588 x 10-1 425 52 89.10% 477 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT4G00560 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '88.0333'
Avg. expression score in LCM sample: '66.6404'
Tissue used: 'full endosperm'
AT4G00560 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00560 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '106.079'
Avg. embryo expression (LCM): '112.851'
AT4G00560 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '56.5632'
Avg. expression score in LCM sample: '66.6404'
Tissue used: 'pure endosperm, no chalazal'
AT4G00550 DGD2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.69956 x 10-1 8 7 0 16 53.33% 100.00% 15 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.172044'
Avg. expression score for this sample: '51.5058'
Avg. expression score in LCM sample: '38.1852'
Tissue used: 'pure endosperm, no chalazal'
AT4G00550 DGD2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.38476 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00550 DGD2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.82057 x 10-1 7 17 3 2 29.17% 40.00% 24 5 TAIR8 Avg. embryo expression (dissected): '50.1282'
Avg. embryo expression (LCM): '45.9518'
AT4G00550 DGD2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.84773 x 10-1 9 4 3 20 69.23% 86.96% 13 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.172044'
Avg. expression score for this sample: '87.0569'
Avg. expression score in LCM sample: '38.1852'
Tissue used: 'full endosperm'
AT4G00550 DGD2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 22 5 81.48% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00550 DGD2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 27 7 79.41% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00540 MYB3R2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.3 x 10-6 118 20 85.51% 138 TAIR8 Mutant effect: 'MEG affected by met1'
AT4G00540 MYB3R2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 1.2 x 10-12 64 0 2 62 100.00% 96.88% 64 64 TAIR8 Validated by Sanger sequencing: '+'
Overall p-value after pooling both replicates: '6.9e-18'
Avg. expression score for this sample: '19.7495'
Avg. expression score in LCM sample: '27.8379'
Tissue used: 'full endosperm'
AT4G00540 MYB3R2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.189629'
Avg. embryo expression (LCM): '.816307'
AT4G00540 MYB3R2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.44591 x 10-1 36 2 94.74% 38 TAIR8 Mutant effect: 'MEG affected by met1'
AT4G00540 MYB3R2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.3 x 10-10 2 7 22.22% 9 TAIR8 Mutant effect: 'MEG affected by met1'
AT4G00540 MYB3R2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 7.1 x 10-6 36 0 0 13 100.00% 100.00% 36 13 TAIR8 Validated by Sanger sequencing: '+'
Overall p-value after pooling both replicates: '6.9e-18'
Avg. expression score for this sample: '16.6341'
Avg. expression score in LCM sample: '27.8379'
Tissue used: 'pure endosperm, no chalazal'
AT4G00530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.83957'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G00530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '16.6479'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G00530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '7.23221'
Avg. embryo expression (LCM): '8.94171'
AT4G00525 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '73.9225'
Avg. embryo expression (LCM): '78.3781'
AT4G00525 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '45.8437'
Avg. expression score in LCM sample: '28.3964'
Tissue used: 'full endosperm'
AT4G00525 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00525 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00525 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00525 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '65.6559'
Avg. expression score in LCM sample: '28.3964'
Tissue used: 'pure endosperm, no chalazal'
AT4G00520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G00520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G00520 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G00520 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.66667 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 3 0 1 25.00% 100.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '32.5877'
Avg. expression score in LCM sample: '18.7545'
Tissue used: 'full endosperm'
AT4G00500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.66667 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00500 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '33.8356'
Avg. embryo expression (LCM): '21.5882'
AT4G00500 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.28571 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '25.225'
Avg. expression score in LCM sample: '18.7545'
Tissue used: 'pure endosperm, no chalazal'
AT4G00490 BAM2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 1 5 7 88.89% 58.33% 9 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.720239'
Avg. expression score for this sample: '110.562'
Avg. expression score in LCM sample: '85.6301'
Tissue used: 'pure endosperm, no chalazal'
AT4G00490 BAM2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.56401 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00490 BAM2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 8 8 1 3 50.00% 75.00% 16 4 TAIR8 Avg. embryo expression (dissected): '140.263'
Avg. embryo expression (LCM): '41.6317'
AT4G00490 BAM2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.31981 x 10-1 19 5 10 18 79.17% 64.29% 24 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.720239'
Avg. expression score for this sample: '120.763'
Avg. expression score in LCM sample: '85.6301'
Tissue used: 'full endosperm'
AT4G00490 BAM2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.43746 x 10-1 52 13 80.00% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00490 BAM2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.4157 x 10-2 30 4 88.24% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00480 ATMYC1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00480 ATMYC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.41255 x 10-1 10 6 14 25 62.50% 64.10% 16 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.8693'
Avg. expression score for this sample: '6.87673'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G00480 ATMYC1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.4673 x 10-1 96 111 32 31 46.38% 49.21% 207 63 TAIR8 Avg. embryo expression (dissected): '100.605'
Avg. embryo expression (LCM): '70.0015'
AT4G00480 ATMYC1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.91753 x 10-1 2 4 33.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00480 ATMYC1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00480 ATMYC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 13 7 2 5 65.00% 71.43% 20 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.8693'
Avg. expression score for this sample: '6.59297'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G00467 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00467 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G00467 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00467 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G00467 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00467 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G00460 ROPGEF3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5.10901'
Avg. embryo expression (LCM): '5.47554'
AT4G00460 ROPGEF3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '16.78'
Avg. expression score in LCM sample: '20.048'
Tissue used: 'full endosperm'
AT4G00460 ROPGEF3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00460 ROPGEF3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00460 ROPGEF3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00460 ROPGEF3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '12.5638'
Avg. expression score in LCM sample: '20.048'
Tissue used: 'pure endosperm, no chalazal'
AT4G00450 CCT endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.26554 x 10-1 417 224 235 622 65.05% 72.58% 641 857 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001633'
Avg. expression score for this sample: '140.496'
Avg. expression score in LCM sample: '106.295'
Tissue used: 'pure endosperm, no chalazal'
AT4G00450 CCT endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.69917 x 10-1 741 279 72.65% 1020 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00450 CCT endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.808 x 10-3 390 148 149 400 72.49% 72.86% 538 549 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001633'
Avg. expression score for this sample: '140.084'
Avg. expression score in LCM sample: '106.295'
Tissue used: 'full endosperm'
AT4G00450 CCT embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.95195 x 10-1 304 358 106 115 45.92% 52.04% 662 221 TAIR8 Avg. embryo expression (dissected): '156.872'
Avg. embryo expression (LCM): '106.421'
AT4G00450 CCT endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.6 x 10-18 946 183 83.79% 1129 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00450 CCT endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.9 x 10-13 297 40 88.13% 337 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00440 TRM15 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.832 x 10-3 184 25 88.04% 209 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00440 TRM15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.2949 x 10-2 218 103 33 141 67.91% 81.03% 321 174 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.2e-27'
Avg. expression score for this sample: '42.6109'
Avg. expression score in LCM sample: '12.7872'
Tissue used: 'pure endosperm, no chalazal'
AT4G00440 TRM15 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1363 18 98.70% 1381 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00440 TRM15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.6 x 10-29 641 236 122 1007 73.09% 89.19% 877 1129 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.2e-27'
Avg. expression score for this sample: '120.713'
Avg. expression score in LCM sample: '12.7872'
Tissue used: 'full endosperm'
AT4G00440 TRM15 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 1019 24 97.70% 1043 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00440 TRM15 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.74395 x 10-1 29 34 8 9 46.03% 52.94% 63 17 TAIR8 Avg. embryo expression (dissected): '11.4165'
Avg. embryo expression (LCM): '6.29185'
AT4G00430 PIP1;4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.73231 x 10-1 74 70 15 21 51.39% 58.33% 144 36 TAIR8 Avg. embryo expression (dissected): '336.45'
Avg. embryo expression (LCM): '287.114'
AT4G00430 PIP1;4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.99 x 10-3 89 4 20 21 95.70% 51.22% 93 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.019302'
Avg. expression score for this sample: '74.7034'
Avg. expression score in LCM sample: '10.7001'
Tissue used: 'full endosperm'
AT4G00430 PIP1;4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-11 241 5 97.97% 246 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00430 PIP1;4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.07166 x 10-1 12 1 92.31% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00430 PIP1;4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.19775 x 10-1 9 5 64.29% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00430 PIP1;4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 18 7 9 13 72.00% 59.09% 25 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.019302'
Avg. expression score for this sample: '63.4872'
Avg. expression score in LCM sample: '10.7001'
Tissue used: 'pure endosperm, no chalazal'