Displaying data sets 64301 - 64400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G00750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.97 x 10-4 270 9 96.77% 279 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00740 QUA3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.7151 x 10-2 31 6 83.78% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00740 QUA3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.5 x 10-5 223 47 82.59% 270 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00740 QUA3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 606 17 97.27% 623 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00740 QUA3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.94758 x 10-1 235 89 95 188 72.53% 66.43% 324 283 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.269371'
Avg. expression score for this sample: '321.478'
Avg. expression score in LCM sample: '131.194'
Tissue used: 'full endosperm'
AT4G00740 QUA3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.21525 x 10-1 135 83 52 32 61.93% 38.10% 218 84 TAIR8 Avg. embryo expression (dissected): '329.203'
Avg. embryo expression (LCM): '171.588'
AT4G00740 QUA3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.39824 x 10-1 96 29 42 56 76.80% 57.14% 125 98 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.269371'
Avg. expression score for this sample: '214.644'
Avg. expression score in LCM sample: '131.194'
Tissue used: 'pure endosperm, no chalazal'
AT4G00730 ANL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.22366 x 10-1 127 67 75 106 65.46% 58.56% 194 181 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.122382'
Avg. expression score for this sample: '473.285'
Avg. expression score in LCM sample: '289.167'
Tissue used: 'pure endosperm, no chalazal'
AT4G00730 ANL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.814 x 10-3 495 104 134 143 82.64% 51.62% 599 277 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.122382'
Avg. expression score for this sample: '684.444'
Avg. expression score in LCM sample: '289.167'
Tissue used: 'full endosperm'
AT4G00730 ANL2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 x 10-10 133 10 93.01% 143 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00730 ANL2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.0442 x 10-2 84 53 28 35 61.31% 55.56% 137 63 TAIR8 Avg. embryo expression (dissected): '302.211'
Avg. embryo expression (LCM): '220.667'
AT4G00730 ANL2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.4 x 10-6 62 64 49.21% 126 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00730 ANL2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.1 x 10-10 216 195 52.55% 411 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00720 SK32 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 11 3 78.57% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00720 SK32 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.89073 x 10-1 9 12 4 3 42.86% 42.86% 21 7 TAIR8 Avg. embryo expression (dissected): '70.3011'
Avg. embryo expression (LCM): '75.5901'
AT4G00720 SK32 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.33022 x 10-1 18 3 6 18 85.71% 75.00% 21 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.250066'
Avg. expression score for this sample: '70.4579'
Avg. expression score in LCM sample: '44.9021'
Tissue used: 'full endosperm'
AT4G00720 SK32 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 11 10 3 18 52.38% 85.71% 21 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.250066'
Avg. expression score for this sample: '53.8651'
Avg. expression score in LCM sample: '44.9021'
Tissue used: 'pure endosperm, no chalazal'
AT4G00720 SK32 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0095 43 3 93.48% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00720 SK32 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00710 BSK3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00710 BSK3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00710 BSK3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00710 BSK3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.2381 x 10-1 0 2 2 1 0.00% 33.33% 2 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.314685'
Avg. expression score for this sample: '73.2047'
Avg. expression score in LCM sample: '59.7617'
Tissue used: 'full endosperm'
AT4G00710 BSK3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 2 0 1 0.00% 100.00% 2 1 TAIR8 Avg. embryo expression (dissected): '84.5359'
Avg. embryo expression (LCM): '67.7535'
AT4G00710 BSK3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 1 1 0.00% 50.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.314685'
Avg. expression score for this sample: '81.86'
Avg. expression score in LCM sample: '59.7617'
Tissue used: 'pure endosperm, no chalazal'
AT4G00700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.67474 x 10-1 23 22 6 14 51.11% 70.00% 45 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.228766'
Avg. expression score for this sample: '12.1611'
Avg. expression score in LCM sample: '8.27493'
Tissue used: 'pure endosperm, no chalazal'
AT4G00700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.17924 x 10-1 17 5 26 33 77.27% 55.93% 22 59 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.228766'
Avg. expression score for this sample: '8.80972'
Avg. expression score in LCM sample: '8.27493'
Tissue used: 'full endosperm'
AT4G00700 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.3 x 10-5 32 2 94.12% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00700 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 4 1 1 1 80.00% 50.00% 5 2 TAIR8 Avg. embryo expression (dissected): '2.77641'
Avg. embryo expression (LCM): '1.11771'
AT4G00700 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.212 x 10-2 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00700 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.1025 x 10-1 34 18 65.38% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00695 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00695 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.352331'
Avg. embryo expression (LCM): '0'
AT4G00695 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.09786'
Avg. expression score in LCM sample: '1.77845'
Tissue used: 'full endosperm'
AT4G00695 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '1.77845'
Tissue used: 'pure endosperm, no chalazal'
AT4G00695 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00695 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00690 ULP1B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00690 ULP1B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00690 ULP1B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00690 ULP1B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.22327'
Avg. expression score in LCM sample: '2.04301'
Tissue used: 'full endosperm'
AT4G00690 ULP1B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.01612'
Avg. embryo expression (LCM): '5.23693'
AT4G00690 ULP1B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.723625'
Avg. expression score in LCM sample: '2.04301'
Tissue used: 'pure endosperm, no chalazal'
AT4G00680 ADF8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 12 7 0 6 63.16% 100.00% 19 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.564807'
Avg. expression score for this sample: '7.17006'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G00680 ADF8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.6229 x 10-2 17 0 100.00% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00680 ADF8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 3 0 0 57.14% 7 0 TAIR8 Avg. embryo expression (dissected): '4.59501'
Avg. embryo expression (LCM): '0'
AT4G00680 ADF8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00680 ADF8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.91 x 10-4 12 26 31.58% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00680 ADF8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 3 100.00% 100.00% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.564807'
Avg. expression score for this sample: '.743769'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G00670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 2 0 0.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.681659'
Avg. expression score for this sample: '22.2001'
Avg. expression score in LCM sample: '5.84977'
Tissue used: 'pure endosperm, no chalazal'
AT4G00670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.18307 x 10-1 6 5 54.55% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 5.2381 x 10-1 4 1 0 0 80.00% 5 0 TAIR8 Avg. embryo expression (dissected): '20.7905'
Avg. embryo expression (LCM): '2.49916'
AT4G00670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.21739 x 10-1 8 1 0 4 88.89% 100.00% 9 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.681659'
Avg. expression score for this sample: '17.248'
Avg. expression score in LCM sample: '5.84977'
Tissue used: 'full endosperm'
AT4G00670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.13712 x 10-1 10 1 90.91% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.3529 x 10-2 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00660 RH8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 2 71.43% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00660 RH8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.81791 x 10-1 86 43 66.67% 129 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00660 RH8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 3 2 4 72.73% 66.67% 11 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.154824'
Avg. expression score for this sample: '131.827'
Avg. expression score in LCM sample: '121.228'
Tissue used: 'pure endosperm, no chalazal'
AT4G00660 RH8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.55279 x 10-1 62 14 81.58% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00660 RH8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.91329 x 10-1 16 10 1 1 61.54% 50.00% 26 2 TAIR8 Avg. embryo expression (dissected): '168.3'
Avg. embryo expression (LCM): '155.375'
AT4G00660 RH8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.12728 x 10-1 33 6 12 27 84.62% 69.23% 39 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.154824'
Avg. expression score for this sample: '103.571'
Avg. expression score in LCM sample: '121.228'
Tissue used: 'full endosperm'
AT4G00650 FRI endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.98184 x 10-1 62 5 42 17 92.54% 28.81% 67 59 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.655819'
Avg. expression score for this sample: '42.6032'
Avg. expression score in LCM sample: '23.4579'
Tissue used: 'full endosperm'
AT4G00650 FRI endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.4 x 10-12 102 3 97.14% 105 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00650 FRI embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.67472 x 10-1 13 18 6 2 41.94% 25.00% 31 8 TAIR8 Avg. embryo expression (dissected): '27.3934'
Avg. embryo expression (LCM): '23.7985'
AT4G00650 FRI endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.8415 x 10-2 0 4 0.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00650 FRI endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 26 4 13 9 86.67% 40.91% 30 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.655819'
Avg. expression score for this sample: '27.1781'
Avg. expression score in LCM sample: '23.4579'
Tissue used: 'pure endosperm, no chalazal'
AT4G00650 FRI endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.6169 x 10-2 24 5 82.76% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00630 KEA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.36057 x 10-1 71 27 72.45% 98 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00630 KEA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 23 18 13 35 56.10% 72.92% 41 48 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.529459'
Avg. expression score for this sample: '26.7368'
Avg. expression score in LCM sample: '17.4611'
Tissue used: 'pure endosperm, no chalazal'
AT4G00630 KEA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.59631 x 10-1 53 56 31 25 48.62% 44.64% 109 56 TAIR8 Avg. embryo expression (dissected): '72.5004'
Avg. embryo expression (LCM): '71.8225'
AT4G00630 KEA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.12216 x 10-1 43 31 37 73 58.11% 66.36% 74 110 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.529459'
Avg. expression score for this sample: '35.0012'
Avg. expression score in LCM sample: '17.4611'
Tissue used: 'full endosperm'
AT4G00630 KEA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.75295 x 10-1 42 18 70.00% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00630 KEA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.3538 x 10-2 16 3 84.21% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00620 EMB3127 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00620 EMB3127 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.5671 1 3 1 1 25.00% 50.00% 4 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '26.4091'
Avg. expression score in LCM sample: '10.4649'
Tissue used: 'pure endosperm, no chalazal'
AT4G00620 EMB3127 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.48872 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00620 EMB3127 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.69319 x 10-1 10 2 83.33% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00620 EMB3127 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 5 0 1 50.00% 100.00% 10 1 TAIR8 Avg. embryo expression (dissected): '70.0559'
Avg. embryo expression (LCM): '98.296'
AT4G00620 EMB3127 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.1677 x 10-1 4 1 0 7 80.00% 100.00% 5 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '26.893'
Avg. expression score in LCM sample: '10.4649'
Tissue used: 'full endosperm'
AT4G00610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.89047'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G00610 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.2 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00610 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.76666'
Avg. embryo expression (LCM): '0'
AT4G00610 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00610 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 5 37.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '12.3429'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G00600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '1.11405'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G00600 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.2125 6 3 66.67% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00600 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 4.28571 x 10-1 3 0 0 0 100.00% 3 0 TAIR8 Avg. embryo expression (dissected): '1.25139'
Avg. embryo expression (LCM): '0'
AT4G00600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.44444 x 10-1 5 0 0 0 100.00% 5 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '2.10001'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G00600 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00600 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00590 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00590 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '22.678'
Avg. expression score in LCM sample: '5.23246'
Tissue used: 'pure endosperm, no chalazal'
AT4G00590 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00590 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '25.4844'
Avg. embryo expression (LCM): '17.0043'
AT4G00590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '24.5009'
Avg. expression score in LCM sample: '5.23246'
Tissue used: 'full endosperm'
AT4G00585 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.80601 x 10-1 24 8 7 29 75.00% 80.56% 32 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.312029'
Avg. expression score for this sample: '70.7091'
Avg. expression score in LCM sample: '61.5402'
Tissue used: 'full endosperm'
AT4G00585 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.017 x 10-3 68 8 89.47% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'