Displaying data sets 64201 - 64300 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G00885 MIR165B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00885 MIR165B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G00885 MIR165B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00885 MIR165B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.15053'
Avg. embryo expression (LCM): '0'
AT4G00885 MIR165B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00885 MIR165B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G00880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.942779'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G00880 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G00880 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00880 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00880 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G00870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 2 1 7 50.00% 87.50% 4 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.214234'
Avg. expression score for this sample: '8.9704'
Avg. expression score in LCM sample: '24.4426'
Tissue used: 'pure endosperm, no chalazal'
AT4G00870 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.24412 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.52108 x 10-1 0 1 4 25 0.00% 86.21% 1 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.214234'
Avg. expression score for this sample: '8.25738'
Avg. expression score in LCM sample: '24.4426'
Tissue used: 'full endosperm'
AT4G00870 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '2.03467'
Avg. embryo expression (LCM): '0'
AT4G00870 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00870 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00860 ATOZI1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.02486 x 10-1 35 13 72.92% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00860 ATOZI1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.60085 x 10-1 313 111 73.82% 424 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00860 ATOZI1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.38 x 10-4 78 22 40 159 78.00% 79.90% 100 199 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000565'
Avg. expression score for this sample: '567.956'
Avg. expression score in LCM sample: '575.027'
Tissue used: 'full endosperm'
AT4G00860 ATOZI1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.79873 x 10-1 80 79 10 19 50.31% 65.52% 159 29 TAIR8 Avg. embryo expression (dissected): '974.701'
Avg. embryo expression (LCM): '1412.58'
AT4G00860 ATOZI1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.5 x 10-6 221 26 89.47% 247 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00860 ATOZI1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.42286 x 10-1 91 44 33 113 67.41% 77.40% 135 146 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000565'
Avg. expression score for this sample: '1050.77'
Avg. expression score in LCM sample: '575.027'
Tissue used: 'pure endosperm, no chalazal'
AT4G00850 GIF3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 1 2 5 80.00% 71.43% 5 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.432822'
Avg. expression score for this sample: '10.2467'
Avg. expression score in LCM sample: '1.3963'
Tissue used: 'pure endosperm, no chalazal'
AT4G00850 GIF3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.73568 x 10-1 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00850 GIF3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.90856 x 10-1 21 15 2 5 58.33% 71.43% 36 7 TAIR8 Avg. embryo expression (dissected): '61.2512'
Avg. embryo expression (LCM): '61.7882'
AT4G00850 GIF3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.11405 x 10-1 5 4 55.56% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00850 GIF3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00850 GIF3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.20195 x 10-1 8 2 3 12 80.00% 80.00% 10 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.432822'
Avg. expression score for this sample: '14.8832'
Avg. expression score in LCM sample: '1.3963'
Tissue used: 'full endosperm'
AT4G00840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 4 1 6 55.56% 85.71% 9 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.523097'
Avg. expression score for this sample: '52.7231'
Avg. expression score in LCM sample: '40.5662'
Tissue used: 'full endosperm'
AT4G00840 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 0 0 66.67% 3 0 TAIR8 Avg. embryo expression (dissected): '34.5675'
Avg. embryo expression (LCM): '36.6459'
AT4G00840 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.72129 x 10-1 9 8 52.94% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.54545 x 10-1 2 0 0 4 100.00% 100.00% 2 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.523097'
Avg. expression score for this sample: '33.8297'
Avg. expression score in LCM sample: '40.5662'
Tissue used: 'pure endosperm, no chalazal'
AT4G00840 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00840 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.55481 x 10-1 21 8 72.41% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00830 LIF2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.99832 x 10-1 210 89 70.23% 299 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00830 LIF2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.73493 x 10-1 36 21 63.16% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00830 LIF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.5214 x 10-2 209 39 135 263 84.27% 66.08% 248 398 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.029347'
Avg. expression score for this sample: '355.431'
Avg. expression score in LCM sample: '130.841'
Tissue used: 'full endosperm'
AT4G00830 LIF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 65 16 33 32 80.25% 49.23% 81 65 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.029347'
Avg. expression score for this sample: '551.12'
Avg. expression score in LCM sample: '130.841'
Tissue used: 'pure endosperm, no chalazal'
AT4G00830 LIF2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8 x 10-14 418 49 89.51% 467 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00830 LIF2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.43979 x 10-1 70 44 18 4 61.40% 18.18% 114 22 TAIR8 Avg. embryo expression (dissected): '402.024'
Avg. embryo expression (LCM): '285.695'
AT4G00820 iqd17 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.78599 x 10-1 238 276 129 138 46.30% 51.69% 514 267 TAIR8 Avg. embryo expression (dissected): '728.439'
Avg. embryo expression (LCM): '562.561'
AT4G00820 iqd17 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.5 x 10-29 879 39 95.75% 918 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00820 iqd17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.2126 x 10-2 156 63 60 189 71.23% 75.90% 219 249 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.1e-09'
Avg. expression score for this sample: '281.874'
Avg. expression score in LCM sample: '135.588'
Tissue used: 'pure endosperm, no chalazal'
AT4G00820 iqd17 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.2 x 10-7 89 2 97.80% 91 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00820 iqd17 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.1 x 10-29 416 4 99.05% 420 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00820 iqd17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.4 x 10-9 214 28 37 144 88.43% 79.56% 242 181 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.1e-09'
Avg. expression score for this sample: '201.337'
Avg. expression score in LCM sample: '135.588'
Tissue used: 'full endosperm'
AT4G00810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.66209 x 10-1 114 56 83 192 67.06% 69.82% 170 275 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.461184'
Avg. expression score for this sample: '381.572'
Avg. expression score in LCM sample: '363.068'
Tissue used: 'full endosperm'
AT4G00810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.11287 x 10-1 101 34 50 81 74.81% 61.83% 135 131 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.461184'
Avg. expression score for this sample: '917.074'
Avg. expression score in LCM sample: '363.068'
Tissue used: 'pure endosperm, no chalazal'
AT4G00810 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.55 x 10-4 244 63 79.48% 307 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.6745 x 10-2 154 105 14 16 59.46% 53.33% 259 30 TAIR8 Avg. embryo expression (dissected): '1856.17'
Avg. embryo expression (LCM): '1526.83'
AT4G00810 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.5279 x 10-2 226 79 74.10% 305 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00810 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.94142 x 10-1 49 25 66.22% 74 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00800 SETH5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 12 3 80.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00800 SETH5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.83011 x 10-1 95 24 79.83% 119 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00800 SETH5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.1098 x 10-2 60 15 22 74 80.00% 77.08% 75 96 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.018271'
Avg. expression score for this sample: '164.652'
Avg. expression score in LCM sample: '130.826'
Tissue used: 'full endosperm'
AT4G00800 SETH5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 5 3 3 58.33% 50.00% 12 6 TAIR8 Avg. embryo expression (dissected): '129.643'
Avg. embryo expression (LCM): '88.3747'
AT4G00800 SETH5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.67 x 10-3 121 14 89.63% 135 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00800 SETH5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.13738 x 10-1 14 3 9 16 82.35% 64.00% 17 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.018271'
Avg. expression score for this sample: '127.029'
Avg. expression score in LCM sample: '130.826'
Tissue used: 'pure endosperm, no chalazal'
AT4G00790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.71911 x 10-1 19 10 14 18 65.52% 56.25% 29 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.174756'
Avg. expression score for this sample: '31.8881'
Avg. expression score in LCM sample: '29.337'
Tissue used: 'pure endosperm, no chalazal'
AT4G00790 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8 x 10-5 161 21 88.46% 182 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00790 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 21 12 10 2 63.64% 16.67% 33 12 TAIR8 Avg. embryo expression (dissected): '37.7661'
Avg. embryo expression (LCM): '25.5567'
AT4G00790 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.2285 x 10-2 137 32 81.07% 169 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00790 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.0287 x 10-2 17 1 94.44% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.9348 x 10-2 76 25 31 95 75.25% 75.40% 101 126 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.174756'
Avg. expression score for this sample: '58.0448'
Avg. expression score in LCM sample: '29.337'
Tissue used: 'full endosperm'
AT4G00780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G00780 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G00780 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G00780 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00780 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00770 TRM9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.3721 x 10-2 28 5 84.85% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00770 TRM9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.11391 x 10-1 13 3 81.25% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00770 TRM9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.20346 x 10-1 142 41 42 48 77.60% 53.33% 183 90 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.461259'
Avg. expression score for this sample: '207.487'
Avg. expression score in LCM sample: '43.6381'
Tissue used: 'full endosperm'
AT4G00770 TRM9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.05094 x 10-1 61 8 39 42 88.41% 51.85% 69 81 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.461259'
Avg. expression score for this sample: '181.818'
Avg. expression score in LCM sample: '43.6381'
Tissue used: 'pure endosperm, no chalazal'
AT4G00770 TRM9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.3 x 10-9 120 9 93.02% 129 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00770 TRM9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.27663 x 10-1 112 84 19 18 57.14% 48.65% 196 37 TAIR8 Avg. embryo expression (dissected): '321.812'
Avg. embryo expression (LCM): '63.3203'
AT4G00760 APRR8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 3 0 0 40.00% 5 0 TAIR8 Avg. embryo expression (dissected): '118.864'
Avg. embryo expression (LCM): '31.6602'
AT4G00760 APRR8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.64403 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00760 APRR8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '125.487'
Avg. expression score in LCM sample: '25.8242'
Tissue used: 'pure endosperm, no chalazal'
AT4G00760 APRR8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00760 APRR8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.333 x 10-3 27 0 100.00% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00760 APRR8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 10 2 7 10 83.33% 58.82% 12 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '137.163'
Avg. expression score in LCM sample: '25.8242'
Tissue used: 'full endosperm'
AT4G00755 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.31094 x 10-1 6 5 0 9 54.55% 100.00% 11 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.751642'
Avg. expression score for this sample: '110.685'
Avg. expression score in LCM sample: '45.6076'
Tissue used: 'full endosperm'
AT4G00755 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 0 1 66.67% 100.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.751642'
Avg. expression score for this sample: '114.544'
Avg. expression score in LCM sample: '45.6076'
Tissue used: 'pure endosperm, no chalazal'
AT4G00755 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.76933 x 10-1 6 3 66.67% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00755 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 4 2 0 1 66.67% 100.00% 6 1 TAIR8 Avg. embryo expression (dissected): '110.754'
Avg. embryo expression (LCM): '78.7423'
AT4G00755 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.75911 x 10-1 24 3 88.89% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00755 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00752 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.44444 x 10-1 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00752 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.44444 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00752 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 1 0 0.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.61927'
Avg. expression score for this sample: '30.4585'
Avg. expression score in LCM sample: '8.59828'
Tissue used: 'full endosperm'
AT4G00752 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '34.5816'
Avg. embryo expression (LCM): '22.7813'
AT4G00752 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.0808 x 10-2 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00752 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 2 1 0 60.00% 0.00% 5 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.61927'
Avg. expression score for this sample: '34.6267'
Avg. expression score in LCM sample: '8.59828'
Tissue used: 'pure endosperm, no chalazal'
AT4G00750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 11 4 4 6 73.33% 60.00% 15 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.028505'
Avg. expression score for this sample: '30.422'
Avg. expression score in LCM sample: '36.8036'
Tissue used: 'pure endosperm, no chalazal'
AT4G00750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 3 3 3 62.50% 50.00% 8 6 TAIR8 Avg. embryo expression (dissected): '19.1785'
Avg. embryo expression (LCM): '15.4219'
AT4G00750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.7429 x 10-2 86 37 69.92% 123 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'