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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G01130 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.40071 x 10-1 3 1 3 7 75.00% 70.00% 4 10 TAIR8 Avg. embryo expression (dissected): '29.7455'
Avg. embryo expression (LCM): '1.06748'
AT4G01130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.39927'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G01120 GBF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 4 5 15 60.00% 75.00% 10 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.524857'
Avg. expression score for this sample: '107.695'
Avg. expression score in LCM sample: '16.1824'
Tissue used: 'pure endosperm, no chalazal'
AT4G01120 GBF2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.00323 x 10-1 0 8 0 3 0.00% 100.00% 8 3 TAIR8 Avg. embryo expression (dissected): '68.2085'
Avg. embryo expression (LCM): '18.7123'
AT4G01120 GBF2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.218 x 10-2 25 20 55.56% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01120 GBF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.60669 x 10-1 16 12 5 30 57.14% 85.71% 28 35 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.524857'
Avg. expression score for this sample: '98.2616'
Avg. expression score in LCM sample: '16.1824'
Tissue used: 'full endosperm'
AT4G01120 GBF2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.52019 x 10-1 37 11 77.08% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01120 GBF2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.5174 x 10-2 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01110 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01110 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01110 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01110 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '26.6396'
Avg. embryo expression (LCM): '4.55876'
AT4G01110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.26053'
Avg. expression score in LCM sample: '8.01036'
Tissue used: 'pure endosperm, no chalazal'
AT4G01110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.45894'
Avg. expression score in LCM sample: '8.01036'
Tissue used: 'full endosperm'
AT4G01100 ADNT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 109 44 72 120 71.24% 62.50% 153 192 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.740918'
Avg. expression score for this sample: '222.993'
Avg. expression score in LCM sample: '98.5201'
Tissue used: 'full endosperm'
AT4G01100 ADNT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.0324 x 10-2 139 45 75.54% 184 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01100 ADNT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.791 x 10-3 13 17 43.33% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01100 ADNT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.88107 x 10-1 66 23 28 57 74.16% 67.06% 89 85 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.740918'
Avg. expression score for this sample: '176.416'
Avg. expression score in LCM sample: '98.5201'
Tissue used: 'pure endosperm, no chalazal'
AT4G01100 ADNT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.4793 x 10-2 108 61 18 11 63.91% 37.93% 169 29 TAIR8 Avg. embryo expression (dissected): '293.642'
Avg. embryo expression (LCM): '348.086'
AT4G01100 ADNT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.4 x 10-10 212 28 88.33% 240 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.7801 x 10-2 69 8 89.61% 77 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.31857 x 10-1 6 7 3 1 46.15% 25.00% 13 4 TAIR8 Avg. embryo expression (dissected): '76.1038'
Avg. embryo expression (LCM): '42.1466'
AT4G01090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.47032 x 10-1 10 1 2 6 90.91% 75.00% 11 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.062375'
Avg. expression score for this sample: '42.5967'
Avg. expression score in LCM sample: '15.2564'
Tissue used: 'pure endosperm, no chalazal'
AT4G01090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.26059 x 10-1 27 5 14 37 84.38% 72.55% 32 51 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.062375'
Avg. expression score for this sample: '81.0728'
Avg. expression score in LCM sample: '15.2564'
Tissue used: 'full endosperm'
AT4G01090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.6128 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.97929 x 10-1 17 8 68.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01080 TBL26 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.95 x 10-4 55 1 98.21% 56 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01080 TBL26 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.7715 x 10-1 8 4 66.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01080 TBL26 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 24 12 16 30 66.67% 65.22% 36 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000331'
Avg. expression score for this sample: '25.7018'
Avg. expression score in LCM sample: '9.30378'
Tissue used: 'pure endosperm, no chalazal'
AT4G01080 TBL26 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.89073 x 10-1 10 13 2 2 43.48% 50.00% 23 4 TAIR8 Avg. embryo expression (dissected): '15.5999'
Avg. embryo expression (LCM): '15.8992'
AT4G01080 TBL26 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.0 x 10-9 149 3 98.03% 152 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01080 TBL26 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.0 x 10-6 69 23 10 120 75.00% 92.31% 92 130 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000331'
Avg. expression score for this sample: '41.9811'
Avg. expression score in LCM sample: '9.30378'
Tissue used: 'full endosperm'
AT4G01070 GT72B1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 382 9 13 195 97.70% 93.75% 391 208 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '181.436'
Avg. expression score in LCM sample: '3.16005'
Tissue used: 'full endosperm'
AT4G01070 GT72B1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.57015 x 10-1 73 0 100.00% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01070 GT72B1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.38282 x 10-1 117 1 99.15% 118 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01070 GT72B1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.39 x 10-4 427 1 99.77% 428 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01070 GT72B1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.14286 x 10-1 2 0 0 2 100.00% 100.00% 2 2 TAIR8 Avg. embryo expression (dissected): '2.45335'
Avg. embryo expression (LCM): '0'
AT4G01070 GT72B1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.7 x 10-15 114 0 3 41 100.00% 93.18% 114 44 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '50.477'
Avg. expression score in LCM sample: '3.16005'
Tissue used: 'pure endosperm, no chalazal'
AT4G01060 CPL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G01060 CPL3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.851382'
Avg. embryo expression (LCM): '0'
AT4G01060 CPL3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01060 CPL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 4 100.00% 0 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '13.3949'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G01060 CPL3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01060 CPL3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01050 TROL endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.61389 x 10-1 99 51 66.00% 150 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01050 TROL endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.932 x 10-3 108 33 76.60% 141 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01050 TROL endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.7111 x 10-2 129 51 71.67% 180 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01050 TROL embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 0.8126 394 432 202 253 47.70% 55.60% 826 455 TAIR8 Avg. embryo expression (dissected): '1634.99'
Avg. embryo expression (LCM): '749.822'
AT4G01050 TROL endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.33231 x 10-1 552 342 249 505 61.74% 66.98% 894 754 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.154377'
Avg. expression score for this sample: '1209.36'
Avg. expression score in LCM sample: '473.64'
Tissue used: 'pure endosperm, no chalazal'
AT4G01050 TROL endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.08163 x 10-1 699 339 315 561 67.34% 64.04% 1038 876 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.154377'
Avg. expression score for this sample: '970.499'
Avg. expression score in LCM sample: '473.64'
Tissue used: 'full endosperm'
AT4G01040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '41.7598'
Avg. expression score in LCM sample: '36.7448'
Tissue used: 'full endosperm'
AT4G01040 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01040 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '40.9199'
Avg. expression score in LCM sample: '36.7448'
Tissue used: 'pure endosperm, no chalazal'
AT4G01040 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '65.2459'
Avg. embryo expression (LCM): '41.8577'
AT4G01040 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01037 WTF1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01037 WTF1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1651.92'
Avg. embryo expression (LCM): '912.644'
AT4G01037 WTF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '309.131'
Avg. expression score in LCM sample: '34.4372'
Tissue used: 'pure endosperm, no chalazal'
AT4G01037 WTF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '189.319'
Avg. expression score in LCM sample: '34.4372'
Tissue used: 'full endosperm'
AT4G01037 WTF1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01037 WTF1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01030 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.71895 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01030 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.30444 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 2 66.67% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '22.7715'
Avg. expression score in LCM sample: '12.3903'
Tissue used: 'pure endosperm, no chalazal'
AT4G01030 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 2 0 0 50.00% 4 0 TAIR8 Avg. embryo expression (dissected): '48.001'
Avg. embryo expression (LCM): '24.4892'
AT4G01030 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 2 2 4 71.43% 66.67% 7 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '26.5436'
Avg. expression score in LCM sample: '12.3903'
Tissue used: 'full endosperm'
AT4G01026 PYL7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 2 1 4 33.33% 80.00% 3 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '50.0488'
Avg. expression score in LCM sample: '7.58412'
Tissue used: 'full endosperm'
AT4G01026 PYL7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01026 PYL7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.05495 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01026 PYL7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.44505 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01026 PYL7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 2 1 1 33.33% 50.00% 3 2 TAIR8 Avg. embryo expression (dissected): '64.2075'
Avg. embryo expression (LCM): '17.2806'
AT4G01026 PYL7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 1 50.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '37.101'
Avg. expression score in LCM sample: '7.58412'
Tissue used: 'pure endosperm, no chalazal'
AT4G01023 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '13.4811'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G01023 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '39.5346'
Avg. embryo expression (LCM): '10.6371'
AT4G01023 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01023 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.23547'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G01023 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01023 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01020 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.626 x 10-2 53 7 88.33% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01020 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.4957 x 10-2 254 53 82.74% 307 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01020 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.9 x 10-17 289 12 96.01% 301 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01020 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 49 45 22 17 52.13% 43.59% 94 39 TAIR8 Avg. embryo expression (dissected): '53.2674'
Avg. embryo expression (LCM): '33.883'
AT4G01020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.15989 x 10-1 145 25 73 89 85.29% 54.94% 170 162 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000089'
Avg. expression score for this sample: '67.1809'
Avg. expression score in LCM sample: '58.4095'
Tissue used: 'pure endosperm, no chalazal'
AT4G01020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.2 x 10-5 187 39 52 171 82.74% 76.68% 226 223 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000089'
Avg. expression score for this sample: '88.6364'
Avg. expression score in LCM sample: '58.4095'
Tissue used: 'full endosperm'
AT4G01010 CNGC13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.30014 x 10-1 9 2 0 10 81.82% 100.00% 11 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.5e-06'
Avg. expression score for this sample: '4.46083'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G01010 CNGC13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 2 0 0 60.00% 5 0 TAIR8 Avg. embryo expression (dissected): '1.611'
Avg. embryo expression (LCM): '0'
AT4G01010 CNGC13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.68206 x 10-1 136 5 96.45% 141 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01010 CNGC13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.39631 x 10-1 27 0 100.00% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01010 CNGC13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.01338 x 10-1 216 5 97.74% 221 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01010 CNGC13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.3 x 10-6 30 2 2 44 93.75% 95.65% 32 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.5e-06'
Avg. expression score for this sample: '14.5847'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G01000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.7 x 10-16 2955 708 1605 3111 80.67% 65.97% 3663 4716 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.2e-18'
Avg. expression score for this sample: '1027.42'
Avg. expression score in LCM sample: '335.553'
Tissue used: 'full endosperm'
AT4G01000 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 6105 417 93.61% 6522 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01000 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.9 x 10-7 1140 735 306 253 60.80% 45.26% 1875 559 TAIR8 Avg. embryo expression (dissected): '662.71'
Avg. embryo expression (LCM): '499.97'
AT4G01000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.4 x 10-5 2071 568 831 1265 78.48% 60.35% 2639 2096 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.2e-18'
Avg. expression score for this sample: '811.763'
Avg. expression score in LCM sample: '335.553'
Tissue used: 'pure endosperm, no chalazal'
AT4G01000 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.03408 x 10-1 431 150 74.18% 581 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G01000 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.6 x 10-25 2851 1650 63.34% 4501 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00990 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.8 x 10-5 36 1 97.30% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G00990 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.88781 x 10-1 4 3 57.14% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'