| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G390876 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0994 x 10-3 | 265 | 195 | 251 | 176 | 57.61% | 41.22% | 460 | 427 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0010994' χ2 p-value for Mo17 x B73: '.000284' Biased in favor of strain: 'B73' |
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| GRMZM2G390876 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.969054 x 10-1 | 109 | 77 | 56 | 100 | 58.60% | 64.10% | 186 | 156 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0196369' χ2 p-value for Mo17 x B73: '.4969054' Biased in favor of strain: '' |
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| GRMZM2G390849 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 0 | 0 | 100.00% | 7 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G390849 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 34 | 0 | 0 | 0 | 100.00% | 34 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G390691 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 2 | 0.00% | 100.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G390691 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G390641 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.81 x 10-11 | 381 | 124 | 309 | 163 | 75.45% | 34.53% | 505 | 472 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.75e-30' χ2 p-value for Mo17 x B73: '1.81e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G390641 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.53134 x 10-2 | 549 | 209 | 215 | 362 | 72.43% | 62.74% | 758 | 577 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0007671' χ2 p-value for Mo17 x B73: '.0453134' Biased in favor of strain: '' |
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| GRMZM2G390489 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.362881 x 10-1 | 314 | 312 | 295 | 389 | 50.16% | 56.87% | 626 | 684 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9362881' χ2 p-value for Mo17 x B73: '.0003254' Biased in favor of strain: '' |
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| GRMZM2G390489 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.93017 x 10-2 | 282 | 117 | 98 | 246 | 70.68% | 71.51% | 399 | 344 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0893017' χ2 p-value for Mo17 x B73: '.0566202' Biased in favor of strain: '' |
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| GRMZM2G390436 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5654 x 10-3 | 10 | 0 | 21 | 2 | 100.00% | 8.70% | 10 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015654' χ2 p-value for Mo17 x B73: '.0000744' Biased in favor of strain: 'B73' |
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| GRMZM2G390436 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.62 x 10-8 | 76 | 4 | 40 | 16 | 95.00% | 28.57% | 80 | 56 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.62e-08' χ2 p-value for Mo17 x B73: '1.47e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G390400 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.16903 x 10-2 | 53 | 37 | 26 | 40 | 58.89% | 60.61% | 90 | 66 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0916903' χ2 p-value for Mo17 x B73: '.0848377' Biased in favor of strain: '' |
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| GRMZM2G390400 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.04818 x 10-2 | 35 | 8 | 34 | 27 | 81.40% | 44.26% | 43 | 61 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0404818' χ2 p-value for Mo17 x B73: '.0002057' Biased in favor of strain: '' |
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| GRMZM2G390374 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.833089 x 10-1 | 58 | 61 | 45 | 79 | 48.74% | 63.71% | 119 | 124 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7833089' χ2 p-value for Mo17 x B73: '.0022635' Biased in favor of strain: '' |
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| GRMZM2G390374 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.3339 x 10-3 | 140 | 42 | 154 | 106 | 76.92% | 40.77% | 182 | 260 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0033339' χ2 p-value for Mo17 x B73: '8.13e-19' Biased in favor of strain: 'B73' |
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| GRMZM2G390345 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.985428 x 10-1 | 29 | 20 | 61 | 36 | 59.18% | 37.11% | 49 | 97 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1985428' χ2 p-value for Mo17 x B73: '.0111372' Biased in favor of strain: '' |
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| GRMZM2G390345 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.316008 x 10-1 | 24 | 4 | 5 | 12 | 85.71% | 70.59% | 28 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0325109' χ2 p-value for Mo17 x B73: '.7316008' Biased in favor of strain: '' |
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| GRMZM2G390334 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.79 x 10-10 | 126 | 12 | 87 | 22 | 91.30% | 20.18% | 138 | 109 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.89e-22' χ2 p-value for Mo17 x B73: '4.79e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G390334 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 18 | 0 | 4 | 0 | 100.00% | 0.00% | 18 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026999' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G390221 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.91 x 10-7 | 476 | 328 | 398 | 264 | 59.20% | 39.88% | 804 | 662 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.79e-07' χ2 p-value for Mo17 x B73: '1.91e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G390221 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.24 x 10-11 | 462 | 111 | 275 | 323 | 80.63% | 54.01% | 573 | 598 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.35e-12' χ2 p-value for Mo17 x B73: '5.24e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G390150 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.088094 x 10-1 | 10 | 4 | 4 | 18 | 71.43% | 81.82% | 14 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1088094' χ2 p-value for Mo17 x B73: '.0028375' Biased in favor of strain: '' |
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| GRMZM2G390150 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.54 x 10-6 | 289 | 79 | 124 | 138 | 78.53% | 52.67% | 368 | 262 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.37e-06' χ2 p-value for Mo17 x B73: '1.54e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G390099 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G390099 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 9 | 0 | 66.67% | 0.00% | 3 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.999992' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: '' |
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| GRMZM2G390096 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 2 | 100.00% | 100.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G390096 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G390076 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.39 x 10-7 | 143 | 247 | 130 | 265 | 36.67% | 67.09% | 390 | 395 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.39e-07' χ2 p-value for Mo17 x B73: '1.10e-11' Biased in favor of strain: 'Mo17' |
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| GRMZM2G390076 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.97 x 10-8 | 40 | 59 | 6 | 135 | 40.40% | 95.74% | 99 | 141 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.97e-08' χ2 p-value for Mo17 x B73: '2.40e-13' Biased in favor of strain: 'Mo17' |
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| GRMZM2G390013 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.341321 x 10-1 | 196 | 151 | 203 | 184 | 56.48% | 47.55% | 347 | 387 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0157038' χ2 p-value for Mo17 x B73: '.3341321' Biased in favor of strain: '' |
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| GRMZM2G390013 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.631 x 10-4 | 289 | 94 | 171 | 228 | 75.46% | 57.14% | 383 | 399 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002631' χ2 p-value for Mo17 x B73: '.0000545' Biased in favor of strain: 'B73' |
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| GRMZM2G389948 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.31 x 10-10 | 331 | 160 | 266 | 142 | 67.41% | 34.80% | 491 | 408 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.19e-14' χ2 p-value for Mo17 x B73: '8.31e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G389948 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.664578 x 10-1 | 35 | 16 | 62 | 16 | 68.63% | 20.51% | 51 | 78 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7664578' χ2 p-value for Mo17 x B73: '5.29e-18' Biased in favor of strain: '' |
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| GRMZM2G389944 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.987251 x 10-1 | 31 | 46 | 62 | 68 | 40.26% | 52.31% | 77 | 130 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0873753' χ2 p-value for Mo17 x B73: '.5987251' Biased in favor of strain: '' |
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| GRMZM2G389944 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G389903 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.354 x 10-3 | 165 | 96 | 136 | 191 | 63.22% | 58.41% | 261 | 327 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000195' χ2 p-value for Mo17 x B73: '.002354' Biased in favor of strain: '' |
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| GRMZM2G389903 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1945 | 200 | 2624 | 1091 | 90.68% | 29.37% | 2145 | 3715 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G389881 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.03685 x 10-2 | 48 | 29 | 36 | 18 | 62.34% | 33.33% | 77 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0303685' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: 'B73' |
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| GRMZM2G389881 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 2 | 4 | 5 | 80.00% | 55.56% | 10 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3710998' χ2 p-value for Mo17 x B73: '.4795' Biased in favor of strain: '' |
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| GRMZM2G389878 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 10 | 0 | 2 | 9.09% | 100.00% | 11 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0066556' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G389878 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 9 | 0 | 12 | 0.00% | 100.00% | 9 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000221' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G389768 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.44 x 10-24 | 9736 | 6100 | 8556 | 7269 | 61.48% | 45.93% | 15836 | 15825 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.44e-24' Biased in favor of strain: 'B73' |
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| GRMZM2G389768 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 16097 | 6166 | 8903 | 13566 | 72.30% | 60.38% | 22263 | 22469 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G389625 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.31491 x 10-2 | 56 | 14 | 32 | 15 | 80.00% | 31.91% | 70 | 47 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.17e-07' χ2 p-value for Mo17 x B73: '.0131491' Biased in favor of strain: 'B73' |
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| GRMZM2G389625 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.392749 x 10-1 | 72 | 65 | 48 | 73 | 52.55% | 60.33% | 137 | 121 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004584' χ2 p-value for Mo17 x B73: '.1392749' Biased in favor of strain: '' |
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| GRMZM2G389570 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 9 | 15 | 20 | 20 | 37.50% | 50.00% | 24 | 40 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206714' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G389570 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.772972 x 10-1 | 12 | 7 | 9 | 16 | 63.16% | 64.00% | 19 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7455863' χ2 p-value for Mo17 x B73: '.7772972' Biased in favor of strain: '' |
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| GRMZM2G389467 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.49 x 10-15 | 0 | 60 | 0 | 94 | 0.00% | 100.00% | 60 | 94 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.49e-15' χ2 p-value for Mo17 x B73: '3.16e-22' Biased in favor of strain: 'Mo17' |
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| GRMZM2G389467 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.111 x 10-4 | 0 | 15 | 0 | 22 | 0.00% | 100.00% | 15 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.32e-08' χ2 p-value for Mo17 x B73: '.0009111' Biased in favor of strain: 'Mo17' |
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| GRMZM2G389379 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.31 x 10-21 | 201 | 44 | 229 | 66 | 82.04% | 22.37% | 245 | 295 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.12e-23' χ2 p-value for Mo17 x B73: '2.31e-21' Biased in favor of strain: 'B73' |
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| GRMZM2G389379 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 4 | 1 | 83.33% | 20.00% | 6 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.0268567' Biased in favor of strain: '' |
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| GRMZM2G389362 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.2 x 10-14 | 1001 | 590 | 927 | 629 | 62.92% | 40.42% | 1591 | 1556 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.76e-25' χ2 p-value for Mo17 x B73: '4.20e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G389362 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.99 x 10-5 | 657 | 424 | 372 | 1110 | 60.78% | 74.90% | 1081 | 1482 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000399' χ2 p-value for Mo17 x B73: '1.78e-11' Biased in favor of strain: 'Mo17' |
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| GRMZM2G389303 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.630246 x 10-1 | 8 | 5 | 6 | 5 | 61.54% | 45.45% | 13 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4053805' χ2 p-value for Mo17 x B73: '.7630246' Biased in favor of strain: '' |
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| GRMZM2G389303 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.07 x 10-4 | 25 | 0 | 20 | 3 | 100.00% | 13.04% | 25 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000407' χ2 p-value for Mo17 x B73: '4.89e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G389301 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.14 x 10-5 | 184 | 111 | 190 | 98 | 62.37% | 34.03% | 295 | 288 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000214' χ2 p-value for Mo17 x B73: '5.92e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G389301 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 9 | 0 | 100.00% | 0.00% | 5 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: '' |
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| GRMZM2G389299 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.21 x 10-5 | 0 | 18 | 0 | 26 | 0.00% | 100.00% | 18 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000221' χ2 p-value for Mo17 x B73: '3.41e-07' Biased in favor of strain: 'Mo17' |
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| GRMZM2G389299 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.43 x 10-7 | 0 | 24 | 0 | 49 | 0.00% | 100.00% | 24 | 49 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.26e-12' χ2 p-value for Mo17 x B73: '7.43e-07' Biased in favor of strain: 'Mo17' |
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| GRMZM2G389285 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 7 | 7 | 5 | 29 | 50.00% | 85.29% | 14 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0000386' Biased in favor of strain: '' |
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| GRMZM2G389285 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.28075 x 10-2 | 5 | 58 | 5 | 25 | 7.94% | 83.33% | 63 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.66e-23' χ2 p-value for Mo17 x B73: '.0528075' Biased in favor of strain: '' |
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| GRMZM2G389233 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.12 x 10-25 | 1089 | 609 | 926 | 530 | 64.13% | 36.40% | 1698 | 1456 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.33e-31' χ2 p-value for Mo17 x B73: '3.12e-25' Biased in favor of strain: 'B73' |
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| GRMZM2G389233 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 2.46 x 10-8 | 1161 | 753 | 815 | 1056 | 60.66% | 56.44% | 1914 | 1871 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.46e-08' χ2 p-value for Mo17 x B73: '6.39e-21' Biased in favor of strain: '' |
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| GRMZM2G389173 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 2 | 6 | 50.00% | 75.00% | 2 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G389173 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 14 | 6 | 3 | 6 | 70.00% | 66.67% | 20 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7518449' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM2G389094 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 10 | 0 | 2 | 0.00% | 100.00% | 10 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015654' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G389094 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 8 | 0 | 3 | 0.00% | 100.00% | 8 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: '' |
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| GRMZM2G389070 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.552 x 10-4 | 122 | 56 | 136 | 84 | 68.54% | 38.18% | 178 | 220 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.54e-07' χ2 p-value for Mo17 x B73: '.0004552' Biased in favor of strain: 'B73' |
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| GRMZM2G389070 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G388987 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.4178 x 10-1 | 108 | 88 | 87 | 100 | 55.10% | 53.48% | 196 | 187 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1531274' χ2 p-value for Mo17 x B73: '.34178' Biased in favor of strain: '' |
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| GRMZM2G388987 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.456033 x 10-1 | 63 | 26 | 55 | 116 | 70.79% | 67.84% | 89 | 171 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4096879' χ2 p-value for Mo17 x B73: '.7456033' Biased in favor of strain: '' |
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| GRMZM2G388915 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.486967 x 10-1 | 346 | 264 | 286 | 297 | 56.72% | 50.94% | 610 | 583 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0008999' χ2 p-value for Mo17 x B73: '.6486967' Biased in favor of strain: '' |
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| GRMZM2G388915 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 1.66 x 10-5 | 73 | 106 | 177 | 231 | 40.78% | 56.62% | 179 | 408 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.04e-13' χ2 p-value for Mo17 x B73: '.0000166' Biased in favor of strain: '' |
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| GRMZM2G388911 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 2 | 100.00% | 100.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G388911 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 1 | 50.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G388892 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.09129 x 10-2 | 213 | 147 | 149 | 114 | 59.17% | 43.35% | 360 | 263 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0005042' χ2 p-value for Mo17 x B73: '.0309129' Biased in favor of strain: 'B73' |
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| GRMZM2G388892 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.03915 x 10-2 | 95 | 65 | 73 | 106 | 59.38% | 59.22% | 160 | 179 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0503915' χ2 p-value for Mo17 x B73: '.0345096' Biased in favor of strain: '' |
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| GRMZM2G388855 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.218148 x 10-1 | 30 | 21 | 34 | 37 | 58.82% | 52.11% | 51 | 71 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2075784' χ2 p-value for Mo17 x B73: '.7218148' Biased in favor of strain: '' |
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| GRMZM2G388855 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.90015 x 10-2 | 20 | 3 | 10 | 3 | 86.96% | 23.08% | 23 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0390015' χ2 p-value for Mo17 x B73: '.0008561' Biased in favor of strain: '' |
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| GRMZM2G388823 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 0 | 2 | 100.00% | 100.00% | 5 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G388823 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.7202 x 10-2 | 34 | 7 | 13 | 5 | 82.93% | 27.78% | 41 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.027202' χ2 p-value for Mo17 x B73: '.0004653' Biased in favor of strain: '' |
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| GRMZM2G388684 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 3 | 0 | 100.00% | 0.00% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G388684 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 2 | 100.00% | 100.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G388585 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.31409 x 10-2 | 26 | 12 | 26 | 11 | 68.42% | 29.73% | 38 | 37 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0231409' χ2 p-value for Mo17 x B73: '.0136637' Biased in favor of strain: 'B73' |
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| GRMZM2G388585 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.158126 x 10-1 | 27 | 10 | 9 | 27 | 72.97% | 75.00% | 37 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4158126' χ2 p-value for Mo17 x B73: '.2888445' Biased in favor of strain: '' |
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| GRMZM2G388576 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.07 x 10-10 | 1 | 41 | 0 | 38 | 2.38% | 100.00% | 42 | 38 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.74e-10' χ2 p-value for Mo17 x B73: '7.07e-10' Biased in favor of strain: 'Mo17' |
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| GRMZM2G388576 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.87 x 10-5 | 0 | 27 | 0 | 33 | 0.00% | 100.00% | 27 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.00e-13' χ2 p-value for Mo17 x B73: '.0000487' Biased in favor of strain: 'Mo17' |
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| GRMZM2G388539 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.34 x 10-8 | 262 | 140 | 217 | 118 | 65.17% | 35.22% | 402 | 335 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.17e-09' χ2 p-value for Mo17 x B73: '6.34e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G388539 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.63 x 10-8 | 543 | 170 | 248 | 227 | 76.16% | 47.79% | 713 | 475 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.63e-08' χ2 p-value for Mo17 x B73: '2.60e-18' Biased in favor of strain: 'B73' |
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| GRMZM2G388453 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.07011 x 10-2 | 0 | 10 | 4 | 11 | 0.00% | 73.33% | 10 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015654' χ2 p-value for Mo17 x B73: '.0707011' Biased in favor of strain: '' |
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| GRMZM2G388453 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 9 | 0 | 8 | 18.18% | 100.00% | 11 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0006467' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G388420 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 1 | 6 | 4 | 85.71% | 40.00% | 7 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0587817' χ2 p-value for Mo17 x B73: '.5270892' Biased in favor of strain: '' |
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| GRMZM2G388420 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 0 | 2 | 100.00% | 100.00% | 6 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832656' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G388297 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 11 | 17 | 9 | 9 | 39.29% | 50.00% | 28 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2568392' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G388297 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 2 | 0 | 4 | 60.00% | 100.00% | 5 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7518208' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G388045 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 8 | 0 | 1 | 46.67% | 100.00% | 15 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7962534' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G388045 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 4 | 8 | 24 | 50.00% | 75.00% | 8 | 32 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173024' χ2 p-value for Mo17 x B73: '.3173106' Biased in favor of strain: '' |
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| GRMZM2G387837 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.2569 x 10-3 | 199 | 127 | 172 | 127 | 61.04% | 42.47% | 326 | 299 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000667' χ2 p-value for Mo17 x B73: '.0092569' Biased in favor of strain: 'B73' |
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| GRMZM2G387837 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.562 x 10-4 | 127 | 30 | 63 | 37 | 80.89% | 37.00% | 157 | 100 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001562' χ2 p-value for Mo17 x B73: '3.11e-10' Biased in favor of strain: 'B73' |